Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016435.1_202016-02-08]
135 sequences; 9,359,904 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq12 190 3e-43
seq20 129 7e-25
>seq12
Length=271197
Score = 190 bits (210), Expect = 3e-43
Identities = 935/1469 (64%), Gaps = 43/1469 (3%)
Strand=Plus/Plus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
||||| |||| ||||| || || || ||||| |||| ||||| ||||||| || ||
Sbjct 88264 TAGATGTTGGAAGTGTAAGGTTCGAAACACTCGTTGTAACCCAGAATTTGGGAAGTTGAA 88323
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301
|| |||||||| ||||| | || | ||| | | ||| | ||| |
Sbjct 88324 GCAGTGGGCATAGGTGCAACTAGCAACGAGTTTCTTAAACCTGTGGAAACAATCTTGGCT 88383
Query 118302 TTGAGAGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGA 118359
||||| | ||||| || | | | || | || | | ||||| ||| | || |
Sbjct 88384 TTGAGTGATTCCCATTCCCACAGCTCAGAG--GGCTTCTTGTCCCACAAGTCATATTGCA 88441
Query 118360 GGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCA 118419
|| || || || ||||| || || | || || || || | || || | | || |
Sbjct 88442 AAATGCCCTGAGATGCTGGAGAACCTTGGAAGGTTTCGTAGGCTCCTTCTTCGACGGCTA 88501
Query 118420 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTG 118479
||||| | || || | ||||| || || || ||||||||||| || ||| |
Sbjct 88502 ATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGATAGTTTCAAAAATCTGAATATTAAGCT 88561
Query 118480 CCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTT 118539
||||| || |||||||| | | || || ||||| |||| || | |||||
Sbjct 88562 GTTTGGCTTCTGGAGAATCAAAAGGAATTCTCAACTTCATAAAAGCATCAGCTAAACCTT 88621
Query 118540 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCA-CGGGA 118598
| ||||| | | || || | || | |||||| || ||| ||| ||| | ||||
Sbjct 88622 GAACACCCACAGCTATAGGTCTATTACGCATATTCGATCTCCTAGCT-TCTGGAACGGGG 88680
Query 118599 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 118658
|||||||| || ||||||| || || | || || || || || |||||||||||
Sbjct 88681 TAAAAATTTCTGTCGATAATTCTGTTCAAGTTACGAGTAACCACTTTGGTGATTTCATGC 88740
Query 118659 AGCTTTTCGTAATCAAAACTGC---GAGTCTCTTCATTG---ACATACTTAGGAAGGGCG 118712
|||||||| | | | | || |||| || || | ||| | ||||| ||
Sbjct 88741 AGCTTTTCAAAGTTGTACCAGCAGTGAGTATCATCGGTTTCAACAAAGGCTGGAAGAGCA 88800
Query 118713 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTG 118772
|| || |||| ||||| |||| ||||| ||| || ||| || | |||||| |
Sbjct 88801 ATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCGGGGAAGAGTATTCAACAATTTCACAG 88860
Query 118773 CACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 118832
|| | ||| || |||||| ||||||||||| || || | ||| ||||||| |||
Sbjct 88861 CAAAGGTTAGAGGATTTAATGACACCCAAGTTCTTCTGGTTAGTTTTTTTGTTACAAGCA 88920
Query 118833 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAG 118892
||||| || |||||| |||| || || || || ||||| | || || || || | |||
Sbjct 88921 TCCTTATACAGCATGAATGGAGTACCAGTTTCTGTTTGTGCCTCAAGGATGGCGTACCAA 88980
Query 118893 ACATCGGCAGCTGGCACAGTGGCGTTGGCT----CGCCCCTCTTCCTCGTACTTTGTGTA 118948
| | ||| | || ||| || || || || | ||||| || |||
Sbjct 88981 AGCTTTTGGGCTTTGATGGT----TTGTCTTCCACGACCTTCCTTTTCGTATCTTTCGTA 89036
Query 118949 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 119008
| | ||||| || || || | | || | || || || || | | ||| ||||
Sbjct 89037 CAATTCCTCAAATTCATCTCCATAGACGTCGGCAAGGCCAGGAGCTTCACTTGGAGAGAA 89096
Query 119009 GAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 119068
|| | ||| | ||| || || || | |||||||| || || |||||||| | ||
Sbjct 89097 CAGGGTCCAATCGCCATTCTGTTCTACTCTTTTCATGAACAGATCAGGGATCCACAAAGC 89156
Query 119069 CGAGAAGAGATCCCGACAGC-GAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 119127
| ||| | || | | | || || || | | || || || ||| | || | |
Sbjct 89157 GGGGAATAAGTCTCTAGCTCTGATCTCCT-CTTTACCATGGTTCTTACGAATATCAATGA 89215
Query 119128 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG-- 119185
|| | | ||| || || ||||| || |||| ||||| || | || || | ||||
Sbjct 89216 AGGCAAAGATGTCGGCATGCCATGGCTCCAAGTACAAAGCAAATGCACC---AGGACGTT 89272
Query 119186 ----ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGA 119241
|||| | |||| ||||| | |||||| ||| || || | | ||||||||| |
Sbjct 89273 TGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTGAAGACCCTCACCATTGGAATAA 89332
Query 119242 TACCATCGGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTATTGGCTCTGACATCGTG 119299
|||||| || || || || || ||| | || || |||| | | || ||
Sbjct 89333 TACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGATCCTG--TGGCACGAATATTATG 89390
Query 119300 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 119359
||||||| |||||| || || || || |||||| || || ||| | | | | |
Sbjct 89391 AATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGCACATTCCTTCAAAGTATC 89450
Query 119360 GTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGG 119419
||| || || || || |||||| || | || | | ||| || |||||||| ||
Sbjct 89451 GTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAAACATGATGACATTTGTGG 89510
Query 119420 CCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACA 119478
|| ||||||||||| || ||||| || | || || |||| |||| | || ||
Sbjct 89511 GTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGTGAA-ATACTTCTGACTCA 89569
Query 119479 TCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCC 119538
| || || || || | || | |||||| || || ||||| ||||| | || |
Sbjct 89570 TAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACCATGAATGCCGATAGCAACAC 89629
Query 119539 GCATAAACATGTATTGGGGTGTTTC--CATCAGGATACCATCGAGCCTCTGGAGGTAAC- 119595
|||||| || || ||| || ||| || || |||||| | ||| | ||||||
Sbjct 89630 GCATAATCAAGTGTTGAGGACGTTCTGCAACAT--TACCATTAATTCTCAGAAGGTAAGA 89687
Query 119596 TCTTCTCCAAGGTCTTGAGACCAAAATAG 119624
|||| ||||||||||||| ||||| |||
Sbjct 89688 TCTT-TCCAAGGTCTTGAATCCAAAGTAG 89715
>seq20
Length=435382
Score = 129 bits (142), Expect = 7e-25
Identities = 386/586 (66%), Gaps = 25/586 (4%)
Strand=Plus/Minus
Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075
||||| || ||| | |||||||| | | | || || ||||| |||||| || ||||
Sbjct 329089 GCAAAGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCT 329030
Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135
||||||||||| | ||||||||||||||| || | | ||| || || || ||||||||
Sbjct 329029 GGCATGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATA 328970
Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATC--- 130191
||||| ||| ||||| |||| | ||| ||||| || | | | || |||
Sbjct 328969 CCCTCAACAGCAGCGAAGGCAACCAAACGTTCAGC----GAACAATGCATCGTCATCAGA 328914
Query 130192 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TT 130250
|| ||| |||| ||||| | ||||||| | |||||| || | ||||| ||| || ||
Sbjct 328913 AATCCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATT 328854
Query 130251 CA--AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATA 130308
| | || ||| | ||| ||||||||||||||| |||| || || || ||
Sbjct 328853 GAACAGGAATTCAGAC---TCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTA 328797
Query 130309 TGTTTCGCCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGC 130367
|| ||| || | | | ||| || | ||| | |||| || | ||||||
Sbjct 328796 AGTCTCGGAGTGAATGTTCTCCATCAT-GATCTGGAAACCGTAAAAGCATTTTGCTTCGG 328738
Query 130368 TTATCTGTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACC 130427
| || |||||| | ||||| | | || ||| ||||| || || ||
Sbjct 328737 GAAGTTGAACCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGG 328678
Query 130428 CAGCAAAAAACGCCAGGA---TATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGG 130481
||||||| || || |||| | | | | |||||| |||||| ||||||| |
Sbjct 328677 CAGCAAAGAAGGCAAGGACTCTCGAGATGAAGAATTT---TTCATTATCGTTCATACGAT 328621
Query 130482 TCTTCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATTT 130541
| |||||||| | | |||||| || |||| ||||| ||||||||| | ||
Sbjct 328620 TATTCCAGTCATGCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTT 328561
Query 130542 GAGCCTTCTTATAGAGTTCCCAGAGGTGGGGATACTTCAGGGGGAA 130587
|||| ||| || | || ||||| | | | ||||||| |||||
Sbjct 328560 CGGCCTGCTTGTACATTTGCCAGATATCGTGGTACTTCAAAGGGAA 328515
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434156390600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |