Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016435.1_202016-02-08] 135 sequences; 9,359,904 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq20 183 3e-41 >seq20 Length=435382 Score = 183 bits (202), Expect = 3e-41 Identities = 544/833 (65%), Gaps = 11/833 (1%) Strand=Plus/Minus Query 23240 TTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTA- 23298 ||||||| || || || ||||| | || || || || ||||| || ||||||||||| Sbjct 329361 TTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTCTCCATGAAGTCAAATGGATTGT 329302 Query 23299 -GAAGTATTATATACAGCTTTACAT-GATAATTCCTTTAAA-AGCCTATCTGCTACAAAT 23355 || || | |||| |||| | | | || | || || || || || || Sbjct 329301 TGACGT----TGTACACCTTTTTGTTGCCCAGAGCTACCAGTAGTCTGTCAGCAACGAAC 329246 Query 23356 TCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCA 23415 |||| ||| || |||||||| |||| || || | || || |||| || || Sbjct 329245 TCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAGGAGACAGGAAGAGCGTCT 329186 Query 23416 TATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAACAATAACTTCTTCA 23475 ||| | |||||| || ||||| ||| | || || | ||| | ||| ||| Sbjct 329185 GTGAAGTACCTTTTTTCGATCTCGACAGCCTCTGTGATAATCTTTTCAACGATTTCCTCA 329126 Query 23476 CTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCA 23535 || | | || ||||||| ||| | || || ||||| ||| |||| || || Sbjct 329125 CTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAAAGTCAGTGTGTAATCCCTCG 329066 Query 23536 TCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATC 23595 || || | ||| | ||||| || || || || |||||||| | |||| || || | | Sbjct 329065 TCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCATGAGACCTCTCTTCTTCAAC 329006 Query 23596 CAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACA 23655 || || || | |||||| ||||| |||||||| |||||||||||||| || ||||| || Sbjct 329005 CAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCTCAACAGCAGCGAAGGCAACC 328946 Query 23656 AGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTC 23715 | |||| | | || ||||| | ||||||||||||| | | | ||| | |||||| Sbjct 328945 AAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATCTCATGGCCCAGTCAGCCTTT 328886 Query 23716 AATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCT 23775 ||| | ||| ||| || || || || || || || || |||| |||| Sbjct 328885 TCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGGAATTCAGACTCTTTTGGATCT 328826 Query 23776 GTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATC 23835 | || || |||||||| || || || | || || ||||| || || || ||| Sbjct 328825 TTGATGTAAGTATCAATCAGCAAGGAGTAAGTCTCGGAGTGAATGTTCTCCATCATGATC 328766 Query 23836 TGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCT 23895 || || || ||||| ||| | ||||| | | |||||| ||| | || ||| | Sbjct 328765 TGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAACCTCAGCACTGAAATTTTCCACC 328706 Query 23896 AAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAA 23955 || ||||| || |||||||| ||| ||||||||||| ||||| || || || Sbjct 328705 AAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGAAGGCAAGGACTCTCGAGATGAAG 328646 Query 23956 TGTCTTTCATCA--GTTGATA-ATTTTTTCCAATCATTAATATCTTTTGATAAATCAACT 24012 | |||||| | ||| ||| || ||||| |||| | ||| || | || | | Sbjct 328645 AATTTTTCATTATCGTTCATACGATTATTCCAGTCATGCAAATCCTTACCCAGGTCTATT 328586 Query 24013 TCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATC 24065 || ||| | |||||||| || ||| |||| |||||| |||| ||||| Sbjct 328585 TCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGTACATTTGCCAGATATC 328533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487119989000