Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08] 165 sequences; 9,358,797 total letters Query= NC_000935.1 Length=36524 Score E Sequences producing significant alignments: (Bits) Value seq57 289 7e-74 >seq57 Length=4629 Score = 289 bits (320), Expect = 7e-74 Identities = 642/956 (67%), Gaps = 14/956 (1%) Strand=Plus/Minus Query 23561 CAAAAACGCCGTCAATTTGTTTGGCGTGTTCAGTAAGATGATTAGACGCTAAGTGTGCAT 23620 |||||| | |||| |||| | || || || || | |||||||| ||| | ||| |||| Sbjct 1106 CAAAAATGTCGTCTATTTTCCTCGCATGCTCTGTCAAATGATTAGGCGCAAGGTGAGCAT 1047 Query 23621 ATCGCCTTACCATTTCGACTGATTCCCATCCACCCATTTCTTGTAAAACAGAAAGTGGAA 23680 | | | |||||||| | || |||||||| |||||||| || | || || | ||| | Sbjct 1046 ACCTACGAACCATTTCTATGGACTCCCATCCGCCCATTTCCTGAAGCACTGATAATGGGA 987 Query 23681 CGCCAGACTGAATTAACCAGCTAGCCCAAGTATGTCTCAGATCATGAAAGCGAAAATTTT 23740 |||| |||||||| | |||||| ||||| || ||||| || ||||| || || |||| || Sbjct 986 CGCCTGACTGAATCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTT 927 Query 23741 CTATTCCGGCTCGTTTTAATGCCGCCCTCCATGCCGTATTAGAATCGACCCGCATTTTTC 23800 | ||||| || || | || | ||||| || || |||| ||||| || | Sbjct 926 CAATTCCTGCACGACGACAAGCTGATAGCCATGATGTCTTGCTGTCGATGCGCATCTTCC 867 Query 23801 TAATCGAATTTGTTTGTGAACCATCAGATCGCTTTGCTGACATTGTATGTACGAATACCC 23860 | | || | ||| || ||||| | |||||| || | | | |||||||| || |||| Sbjct 866 TGACCGCAGGCGTTGATGTTCCATCTGCTCGCTTAGCCGCCTTGGTATGTACAAACACCC 807 Query 23861 ATTTTTGATGATTACCCAATTG-TCGCGTCAGAATACAGCAAGCCGTATCGTTTAGAGCT 23919 |||| ||||| || || | ||| || || | | | | || || |||||||| || || Sbjct 806 ATTTGTGATGCTTGCCTATTTGATCACGCAACACTTTA-CAGGCGGTATCGTTCAGCGCC 748 Query 23920 ACACCTATAGCT---TTTCCCGATTTGCTGTTTTCTGGCTCTATCCAGGCAACTTTTCTT 23976 ||||| || || ||| |||||||| | |||||| | | |||||||||| || Sbjct 747 ACACCAATGGCGCGGTTT---GATTTGCTCTCTTCTGGATTCACCCAGGCAACTCGTCGC 691 Query 23977 TGCATATCAATTTGTGACCACGCTAAATTAATGATATTTGAACGACGTAACCCGGTTGCC 24036 ||||| || |||||| ||| | | ||| ||||| || || | | || |||||| Sbjct 690 TGCATGTCGATTTGTTGCCATTCCAGATTTATGATGTTCGACTTTCTCAGACCAGTTGCC 631 Query 24037 AGCGCAAATTCAACCGTCGATCTAAGGGGTTCAGGACATTCATTGATTAATCTTTCTGCT 24096 |||||||| | || ||| | || ||||| || || |||| || | | || |||| Sbjct 630 AGCGCAAACTTGACGACAGATTTCAGTGGTTCGGGGCACTCATCAATAAGGCGTTTTGCT 571 Query 24097 TCATCCGGTTCTAACCATCTAATACGTTTTTCTCTAGCCGATGGAACCTTAATAACCGGT 24156 || ||| ||| | |||||| | || || | ||| ||| ||| | ||| || || || Sbjct 570 TCCTCCTTTTCCAGCCATCTGACTCGCTTGTTTCTGACCGCTGGTATCTTGATGACAGGC 511 Query 24157 GATTTTTCTATCCATTTCCAATCTCTTTCAGCAGATTTCATCATTGATTTAAGTAGTGCC 24216 | |||||| | ||| ||||| || | ||| |||| | || | || | | || Sbjct 510 GCTTTTTCCAGCCACTTCCAGTCGCGTTCTGCAGCACGGAGAATGGCCTTTATCATGGCA 451 Query 24217 AAATGCTTAGCTTTTGTTGCTATAGAAACTTCTTTCGCTTGATAAGCGGGTATTTCTATT 24276 | |||||| || ||||| | || ||| || | || |||| | || | |||| | Sbjct 450 AGATGCTTTGCCTTTGTCTGAGTTGATACTGGCTTTGGTTCATAAACAGGCAGTTCTTTA 391 Query 24277 CCTTTTCTTTTTGCTGAATTAACTCTACTTTTCCATCTTAATTGTTCCTGCCTATTTTTC 24336 ||||| || | || | | |||| | ||||||| || || || || || | | Sbjct 390 CCTTTCCTGATGGCGGCCTGAACTTTCTGTTTCCATATTTCTTTCGTCTTTCTGTTATGC 331 Query 24337 ATTTTGCTAATAGCACTATATATTTTTGCTTCTGTCATATCTTTTAATCGGGTACCGCTG 24396 ||| |||| | |||| || || ||||| || | |||||||| | | |||| || Sbjct 330 ATTCTGCTTACAGCAGAGTAAATCTTTGCCTCCGAGATATCTTTAAGCCTTATACC-CTC 272 Query 24397 AAA---TACAGTAGCCAAAAACCAAGTCTACCCTTGTCATCGTCTAAAGATTTCTTGTTA 24453 ||| | || ||||| || ||| | | || || || | |||||| || | | Sbjct 271 AAAATGTTCA--AGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCA 214 Query 24454 GCCTTCTCTTCAATCCATCTCAAGCAGGCTTCGTCAAATGTGACATTAGGAAAATC 24509 || || || |||| |||||| | |||||| || ||||| ||||||| ||| ||||| Sbjct 213 GCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATC 158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116754971232780