Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08]
165 sequences; 9,358,797 total letters
Query= NC_000935.1
Length=36524
Score E
Sequences producing significant alignments: (Bits) Value
seq57 289 7e-74
>seq57
Length=4629
Score = 289 bits (320), Expect = 7e-74
Identities = 642/956 (67%), Gaps = 14/956 (1%)
Strand=Plus/Minus
Query 23561 CAAAAACGCCGTCAATTTGTTTGGCGTGTTCAGTAAGATGATTAGACGCTAAGTGTGCAT 23620
|||||| | |||| |||| | || || || || | |||||||| ||| | ||| ||||
Sbjct 1106 CAAAAATGTCGTCTATTTTCCTCGCATGCTCTGTCAAATGATTAGGCGCAAGGTGAGCAT 1047
Query 23621 ATCGCCTTACCATTTCGACTGATTCCCATCCACCCATTTCTTGTAAAACAGAAAGTGGAA 23680
| | | |||||||| | || |||||||| |||||||| || | || || | ||| |
Sbjct 1046 ACCTACGAACCATTTCTATGGACTCCCATCCGCCCATTTCCTGAAGCACTGATAATGGGA 987
Query 23681 CGCCAGACTGAATTAACCAGCTAGCCCAAGTATGTCTCAGATCATGAAAGCGAAAATTTT 23740
|||| |||||||| | |||||| ||||| || ||||| || ||||| || || |||| ||
Sbjct 986 CGCCTGACTGAATCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTT 927
Query 23741 CTATTCCGGCTCGTTTTAATGCCGCCCTCCATGCCGTATTAGAATCGACCCGCATTTTTC 23800
| ||||| || || | || | ||||| || || |||| ||||| || |
Sbjct 926 CAATTCCTGCACGACGACAAGCTGATAGCCATGATGTCTTGCTGTCGATGCGCATCTTCC 867
Query 23801 TAATCGAATTTGTTTGTGAACCATCAGATCGCTTTGCTGACATTGTATGTACGAATACCC 23860
| | || | ||| || ||||| | |||||| || | | | |||||||| || ||||
Sbjct 866 TGACCGCAGGCGTTGATGTTCCATCTGCTCGCTTAGCCGCCTTGGTATGTACAAACACCC 807
Query 23861 ATTTTTGATGATTACCCAATTG-TCGCGTCAGAATACAGCAAGCCGTATCGTTTAGAGCT 23919
|||| ||||| || || | ||| || || | | | | || || |||||||| || ||
Sbjct 806 ATTTGTGATGCTTGCCTATTTGATCACGCAACACTTTA-CAGGCGGTATCGTTCAGCGCC 748
Query 23920 ACACCTATAGCT---TTTCCCGATTTGCTGTTTTCTGGCTCTATCCAGGCAACTTTTCTT 23976
||||| || || ||| |||||||| | |||||| | | |||||||||| ||
Sbjct 747 ACACCAATGGCGCGGTTT---GATTTGCTCTCTTCTGGATTCACCCAGGCAACTCGTCGC 691
Query 23977 TGCATATCAATTTGTGACCACGCTAAATTAATGATATTTGAACGACGTAACCCGGTTGCC 24036
||||| || |||||| ||| | | ||| ||||| || || | | || ||||||
Sbjct 690 TGCATGTCGATTTGTTGCCATTCCAGATTTATGATGTTCGACTTTCTCAGACCAGTTGCC 631
Query 24037 AGCGCAAATTCAACCGTCGATCTAAGGGGTTCAGGACATTCATTGATTAATCTTTCTGCT 24096
|||||||| | || ||| | || ||||| || || |||| || | | || ||||
Sbjct 630 AGCGCAAACTTGACGACAGATTTCAGTGGTTCGGGGCACTCATCAATAAGGCGTTTTGCT 571
Query 24097 TCATCCGGTTCTAACCATCTAATACGTTTTTCTCTAGCCGATGGAACCTTAATAACCGGT 24156
|| ||| ||| | |||||| | || || | ||| ||| ||| | ||| || || ||
Sbjct 570 TCCTCCTTTTCCAGCCATCTGACTCGCTTGTTTCTGACCGCTGGTATCTTGATGACAGGC 511
Query 24157 GATTTTTCTATCCATTTCCAATCTCTTTCAGCAGATTTCATCATTGATTTAAGTAGTGCC 24216
| |||||| | ||| ||||| || | ||| |||| | || | || | | ||
Sbjct 510 GCTTTTTCCAGCCACTTCCAGTCGCGTTCTGCAGCACGGAGAATGGCCTTTATCATGGCA 451
Query 24217 AAATGCTTAGCTTTTGTTGCTATAGAAACTTCTTTCGCTTGATAAGCGGGTATTTCTATT 24276
| |||||| || ||||| | || ||| || | || |||| | || | |||| |
Sbjct 450 AGATGCTTTGCCTTTGTCTGAGTTGATACTGGCTTTGGTTCATAAACAGGCAGTTCTTTA 391
Query 24277 CCTTTTCTTTTTGCTGAATTAACTCTACTTTTCCATCTTAATTGTTCCTGCCTATTTTTC 24336
||||| || | || | | |||| | ||||||| || || || || || | |
Sbjct 390 CCTTTCCTGATGGCGGCCTGAACTTTCTGTTTCCATATTTCTTTCGTCTTTCTGTTATGC 331
Query 24337 ATTTTGCTAATAGCACTATATATTTTTGCTTCTGTCATATCTTTTAATCGGGTACCGCTG 24396
||| |||| | |||| || || ||||| || | |||||||| | | |||| ||
Sbjct 330 ATTCTGCTTACAGCAGAGTAAATCTTTGCCTCCGAGATATCTTTAAGCCTTATACC-CTC 272
Query 24397 AAA---TACAGTAGCCAAAAACCAAGTCTACCCTTGTCATCGTCTAAAGATTTCTTGTTA 24453
||| | || ||||| || ||| | | || || || | |||||| || | |
Sbjct 271 AAAATGTTCA--AGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCA 214
Query 24454 GCCTTCTCTTCAATCCATCTCAAGCAGGCTTCGTCAAATGTGACATTAGGAAAATC 24509
|| || || |||| |||||| | |||||| || ||||| ||||||| ||| |||||
Sbjct 213 GCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATC 158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 116754971232780
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |