Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08]
165 sequences; 9,358,797 total letters
Query= NC_002371.2
Length=41724
Score E
Sequences producing significant alignments: (Bits) Value
seq57 381 2e-101
>seq57
Length=4629
Score = 381 bits (422), Expect = 2e-101
Identities = 684/991 (69%), Gaps = 16/991 (2%)
Strand=Plus/Minus
Query 21372 TCCTTATTTTTACTGTGGGACATATTTGGGACAGAAGTACCAAAAATCGAGTCAATTTGT 21431
||| || ||| | ||||||||||||||||||| | ||||||||| ||| ||||
Sbjct 1146 TCCATAATTTCAGAGTGGGACATATTTGGGACATTATCACCAAAAATGTCGTCTATTTTC 1087
Query 21432 CGAGCATGTTCAGTCAGGTGATTTGGTGCCAGATGAGCATATCGGCGAACCATTTCGATA 21491
| ||||| || |||| ||||| || || || |||||||| | ||||||||||| ||
Sbjct 1086 CTCGCATGCTCTGTCAAATGATTAGGCGCAAGGTGAGCATACCTACGAACCATTTCTATG 1027
Query 21492 GACTCCCAGCCACCCATTTCCTGCAATACCGAAATCGGAACGCCAGCCTGAACTAACCAA 21551
|||||||| || ||||||||||| | || || | || ||||| | ||||| | |||
Sbjct 1026 GACTCCCATCCGCCCATTTCCTGAAGCACTGATAATGGGACGCCTGACTGAATCAGCCAG 967
Query 21552 CTTGCCCACGTGTGCCTCAGGTCATGAAAACGGAAGTCTTCAATGCCCGCTCGTTTTAAT 21611
|||||||| ||||| || |||||||| |||||||| |||||||| || || || |
Sbjct 966 CTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCAATTCCTGCACGACGACAA 907
Query 21612 GCTGCCCTCCATGCAGTATTAGCGTCATAGCGCATCTTCCTCACTACAGGTGATTTAGTT 21671
|||| ||||| || || ||| |||||||||||| || |||| | | |||
Sbjct 906 GCTGATAGCCATGATGTCTTGCTGTCGATGCGCATCTTCCTGACCGCAGGCGTTGATGTT 847
Query 21672 CCGTCTGGTTTGGT-GCTGCTTTCCT-TGTAGACGAACACCCATTTGTGATGATTGCCGA 21729
|| |||| | | || || || | |||| | ||||||||||||||||| ||||| |
Sbjct 846 CCATCTGCTCGCTTAGCCGCCTTGGTATGTACA--AACACCCATTTGTGATGCTTGCCTA 789
Query 21730 TTTGCTTTTTCAGCACCCGGCAAGCGGTATCATTCAGCGCCACTCCAATGGCATGATTAG 21789
|||| | || ||| || |||||||| ||||||||||| |||||||| | || |
Sbjct 788 TTTGATCACGCAACACTTTACAGGCGGTATCGTTCAGCGCCACACCAATGGCGCGGTTTG 729
Query 21790 ACTTGCTTTGTTCCGGGTGTATCCATGCCACCTTTCGTTGCATGTCTATCTGCTGCCACT 21849
| ||||| | ||| || | | ||| || || ||| |||||||| || || ||||| |
Sbjct 728 ATTTGCTCTCTTCTGGATTCACCCAGGCAACTCGTCGCTGCATGTCGATTTGTTGCCATT 669
Query 21850 CCAGATTGATAATGTTAGACCGCCTTAAGCCAGTAGAAAGCGCAAACTCTACGACTGACT 21909
||||||| || ||||| ||| || | ||||| | |||||||||| ||||| || |
Sbjct 668 CCAGATTTATGATGTTCGACTTTCTCAGACCAGTTGCCAGCGCAAACTTGACGACAGATT 609
Query 21910 TTAGCGGTTCCTGGCATTCATCAATCAACCTTTTTGCCTCGTGAGGCTCAAGCCAGCGGA 21969
| || ||||| |||| |||||||| | | |||||| || | || ||||| | ||
Sbjct 608 TCAGTGGTTCGGGGCACTCATCAATAAGGCGTTTTGCTTCCTCCTTTTCCAGCCATCTGA 549
Query 21970 TACGCTTATTTTT--CGGCTGAGGAACTTTGATGATCGGAGCCTTATCCAGCATCTTCCA 22027
||||| ||| | | ||| || | ||||||| || || || |||||| ||||||
Sbjct 548 CTCGCTTGTTTCTGACCGCT--GGTATCTTGATGACAGGCGCTTTTTCCAGCCACTTCCA 491
Query 22028 TTCGCGTTCAGCAGCCCGGAGGAGTGCCTTAATGAATGAAAGGTGAGTTGCTTTTGTAGC 22087
|||||||| ||||| ||||| | ||||| || | | ||| || |||| |||||
Sbjct 490 GTCGCGTTCTGCAGCACGGAGAATGGCCTTTATCATGGCAAGATGCTTTGCCTTTGTCTG 431
Query 22088 TACTGCTGCCGGCTTAGGCTTGAATACCGGAGGCTGCTTCCCATTCTTCCTGCAAGCTTC 22147
|| | | ||||| || | | || || | | || || ||| | || || |
Sbjct 430 AGTTGATACTGGCTTTGGTTCATAAACAGGCAGTTCTTTACCTTTCCTGATGGCGGCCTG 371
Query 22148 ATCCATTAACTTCCAGTTTTCCTCATGCCGCCGATTAGTTAT--CTTCTG--GATGGCGG 22203
| | | ||||| |||| | || | | ||||| ||||| | || |
Sbjct 370 AACTTTCTGTTTCCATATTTC----TTTCGTCTTTCTGTTATGCATTCTGCTTACAGCAG 315
Query 22204 AGTAAATCTTCGTCTCGGTAATATCCTTCAACTGCATTCCTGCAAAATGCTGGAGCCAGA 22263
|||||||||| | ||| | ||||| || | | || || ||||||| | |||||||
Sbjct 314 AGTAAATCTTTGCCTCCGAGATATCTTTAAGCCTTATACCCTCAAAATGTTCAAGCCAGA 255
Query 22264 ATCCTATCCGACTCTTGTCATCATCCAGCGACTTCTTATGCGCCTTCTCCTCTAACCACC 22323
| | ||||| || || || ||| || || || |||| || || ||||| | ||| |
Sbjct 254 ACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATC 195
Query 22324 TGACACAGGCCCCCTCAAAAGTCATGTCAGG 22354
| | |||||| | |||||||| | |||||
Sbjct 194 TTAGGCAGGCCTCTTCAAAAGTGACATCAGG 164
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 133394938628780
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |