Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08] 165 sequences; 9,358,797 total letters Query= NC_003444.1 Length=37074 Score E Sequences producing significant alignments: (Bits) Value seq57 369 9e-98 >seq57 Length=4629 Score = 369 bits (408), Expect = 9e-98 Identities = 732/1071 (68%), Gaps = 41/1071 (4%) Strand=Plus/Minus Query 20606 GGTCGTAGGTTCGACTCCTATTATCGGCACCATTTAAAT-CAATAAGTTACACATCATTA 20664 || || |||||||| |||| || ||||| ||| |||| |||||| | | || Sbjct 1212 GGCCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTT 1153 Query 20665 GTACCTTCCTTATTTTTTGACTGGGACGAATTTGGGACCGATGGGTTC--AGGATCGAGT 20722 || | ||| || ||| || |||||| ||||||||| || | | || || Sbjct 1152 ATATCCTCCATAATTTCAGAGTGGGACATATTTGGGAC--ATTATCACCAAAAATGTCGT 1095 Query 20723 CTATTTGCCGTGCGTGTTCGGTAAGGTGATTAGGTGCAAGGTGAGCATATCGACGAACCA 20782 |||||| || || || || || | |||||||| |||||||||||||| | |||||||| Sbjct 1094 CTATTTTCCTCGCATGCTCTGTCAAATGATTAGGCGCAAGGTGAGCATACCTACGAACCA 1035 Query 20783 TTTCGATAGACTCCCAGCCTCCCATTTCCTGTAACACTGACAACGGGACTCCGGCTTGAC 20842 |||| || |||||||| || ||||||||||| | |||||| || ||||| || | ||| Sbjct 1034 TTTCTATGGACTCCCATCCGCCCATTTCCTGAAGCACTGATAATGGGACGCCTGACTGAA 975 Query 20843 CCAGCCAACTTGCCCAGGTGTGTCTCAAGTCGTGAAATCTGAAATCATCAATACCAGCCC 20902 |||||| ||||||||||||||||| | ||| || || | |||||| ||||| || || | Sbjct 974 TCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCAATTCCTGCAC 915 Query 20903 GTCTCAGCGCCGCTTTCCAGGCTGTGTTTGCGTCATACCGCATCTCCCTTACTGTTGGCG 20962 | | || | | ||| | ||| || ||| ||||||| ||| || | |||| Sbjct 914 GACGACAAGCTGATAGCCATGATGTCTTGCTGTCGATGCGCATCTTCCTGACCGCAGGCG 855 Query 20963 CTTTCGTTCCGTCTGGTTTGGTA-CAGCTTTCCT-TGTACACAAATACCCAACGGTGATG 21020 | ||||| |||| | || | || || | |||||| || ||||| |||||| Sbjct 854 TTGATGTTCCATCTGCTCGCTTAGCCGCCTTGGTATGTACA--AACACCCATTTGTGATG 797 Query 21021 ATTCCCGATTTGTTTTTTCAAAACGCGACATGCAGTATCATTCAGCGCAACGCCAATTGC 21080 || || ||||| | ||| || ||| || ||||| |||||||| || ||||| || Sbjct 796 CTTGCCTATTTGATCACGCAACACTTTACAGGCGGTATCGTTCAGCGCCACACCAATGGC 737 Query 21081 GCGGTTTGATTTACTCTCTTCCGGGTTTATCCATGCCACCCGGCGCTGCATGTCTATTTG 21140 |||||||||||| |||||||| || || | ||| || || || ||||||||||| ||||| Sbjct 736 GCGGTTTGATTTGCTCTCTTCTGGATTCACCCAGGCAACTCGTCGCTGCATGTCGATTTG 677 Query 21141 TTGCCATTCAAGGTTGATGATGTTCGAGCGTCTTAAGCCTGTTGCCAGTGCAAATTCAAC 21200 ||||||||| || || ||||||||||| ||| | || |||||||| ||||| | || Sbjct 676 TTGCCATTCCAGATTTATGATGTTCGACTTTCTCAGACCAGTTGCCAGCGCAAACTTGAC 617 Query 21201 AACAGACTTTAATGGCTCCGGACATTCATCAATCAGCCTTTGTGCTTCATGGGGCTCCAG 21260 ||||| || | ||| || || || |||||||| || | || |||||| | ||||| Sbjct 616 GACAGATTTCAGTGGTTCGGGGCACTCATCAATAAGGCGTTTTGCTTCCTCCTTTTCCAG 557 Query 21261 CCAGCGGATCCGTTTATTCTTTGGTTG-AGGCACTTTAATAATTGGTGCCTTATCCAGCA 21319 ||| | || || || || | || | || | || || | || || || |||||| Sbjct 556 CCATCTGACTCGCTTGTT-TCTGACCGCTGGTATCTTGATGACAGGCGCTTTTTCCAGCC 498 Query 21320 TTTTCCATTCACGCTCTGCGGCTCTTAGTAGGGCCTTTATAAATGAAAGATGCGTAGCCT 21379 ||||| || || ||||| || | || | ||||||||| | | ||||||| | |||| Sbjct 497 ACTTCCAGTCGCGTTCTGCAGCACGGAGAATGGCCTTTATCATGGCAAGATGCTTTGCCT 438 Query 21380 TCGTTGCAACGGACGCTGGTTTTGGCGTGTATTCTGGAACAGGTTTCCCTTT---TTTCC 21436 | || | || |||| ||||| ||| |||||| |||| ||||| Sbjct 437 TTGTCTGAGTTGATACTGGCTTTGG------TTCATAAACAGGCAGTTCTTTACCTTTCC 384 Query 21437 TGCATGCTTCTGCCCTGAGTCTCCAGTTTTCCTCATGACGCCGGTTCGTCATT---TTCT 21493 || ||| | ||||| | | | ||||| || | |||||| || || | Sbjct 383 TG-ATG---GCGGCCTGAACTTTCTG-TTTCCATATTTC----TTTCGTCTTTCTGTTAT 333 Query 21494 GGATT---------GCTGAATAAATTTTTGATTCAGTAATGTCTCTTAGTTGCATTCCTG 21544 | ||| || || ||||| |||| || | || ||| | || || || Sbjct 332 GCATTCTGCTTACAGCAGAGTAAATCTTTGCCTCCGAGATATCTTTAAGCCTTATACCCT 273 Query 21545 CGAAATGTTGAAGCCAGAATCCGATCCGGCTTTTGTCATCGTCCAGTGATTTTTGATGTG 21604 | ||||||| ||||||||| | ||||||||||| || || || ||||||| || | Sbjct 272 CAAAATGTTCAAGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAG 213 Query 21605 CTTTCTCTTCAAGCCACCTGACACACGCTTCCTCGAACGTTATATCAGGTA 21655 |||| || |||||||| || | || || || || || || | |||||||| Sbjct 212 CTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTA 162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118514967784280