Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08]
165 sequences; 9,358,797 total letters
Query= NC_003444.1
Length=37074
Score E
Sequences producing significant alignments: (Bits) Value
seq57 369 9e-98
>seq57
Length=4629
Score = 369 bits (408), Expect = 9e-98
Identities = 732/1071 (68%), Gaps = 41/1071 (4%)
Strand=Plus/Minus
Query 20606 GGTCGTAGGTTCGACTCCTATTATCGGCACCATTTAAAT-CAATAAGTTACACATCATTA 20664
|| || |||||||| |||| || ||||| ||| |||| |||||| | | ||
Sbjct 1212 GGCCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTT 1153
Query 20665 GTACCTTCCTTATTTTTTGACTGGGACGAATTTGGGACCGATGGGTTC--AGGATCGAGT 20722
|| | ||| || ||| || |||||| ||||||||| || | | || ||
Sbjct 1152 ATATCCTCCATAATTTCAGAGTGGGACATATTTGGGAC--ATTATCACCAAAAATGTCGT 1095
Query 20723 CTATTTGCCGTGCGTGTTCGGTAAGGTGATTAGGTGCAAGGTGAGCATATCGACGAACCA 20782
|||||| || || || || || | |||||||| |||||||||||||| | ||||||||
Sbjct 1094 CTATTTTCCTCGCATGCTCTGTCAAATGATTAGGCGCAAGGTGAGCATACCTACGAACCA 1035
Query 20783 TTTCGATAGACTCCCAGCCTCCCATTTCCTGTAACACTGACAACGGGACTCCGGCTTGAC 20842
|||| || |||||||| || ||||||||||| | |||||| || ||||| || | |||
Sbjct 1034 TTTCTATGGACTCCCATCCGCCCATTTCCTGAAGCACTGATAATGGGACGCCTGACTGAA 975
Query 20843 CCAGCCAACTTGCCCAGGTGTGTCTCAAGTCGTGAAATCTGAAATCATCAATACCAGCCC 20902
|||||| ||||||||||||||||| | ||| || || | |||||| ||||| || || |
Sbjct 974 TCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCAATTCCTGCAC 915
Query 20903 GTCTCAGCGCCGCTTTCCAGGCTGTGTTTGCGTCATACCGCATCTCCCTTACTGTTGGCG 20962
| | || | | ||| | ||| || ||| ||||||| ||| || | ||||
Sbjct 914 GACGACAAGCTGATAGCCATGATGTCTTGCTGTCGATGCGCATCTTCCTGACCGCAGGCG 855
Query 20963 CTTTCGTTCCGTCTGGTTTGGTA-CAGCTTTCCT-TGTACACAAATACCCAACGGTGATG 21020
| ||||| |||| | || | || || | |||||| || ||||| ||||||
Sbjct 854 TTGATGTTCCATCTGCTCGCTTAGCCGCCTTGGTATGTACA--AACACCCATTTGTGATG 797
Query 21021 ATTCCCGATTTGTTTTTTCAAAACGCGACATGCAGTATCATTCAGCGCAACGCCAATTGC 21080
|| || ||||| | ||| || ||| || ||||| |||||||| || ||||| ||
Sbjct 796 CTTGCCTATTTGATCACGCAACACTTTACAGGCGGTATCGTTCAGCGCCACACCAATGGC 737
Query 21081 GCGGTTTGATTTACTCTCTTCCGGGTTTATCCATGCCACCCGGCGCTGCATGTCTATTTG 21140
|||||||||||| |||||||| || || | ||| || || || ||||||||||| |||||
Sbjct 736 GCGGTTTGATTTGCTCTCTTCTGGATTCACCCAGGCAACTCGTCGCTGCATGTCGATTTG 677
Query 21141 TTGCCATTCAAGGTTGATGATGTTCGAGCGTCTTAAGCCTGTTGCCAGTGCAAATTCAAC 21200
||||||||| || || ||||||||||| ||| | || |||||||| ||||| | ||
Sbjct 676 TTGCCATTCCAGATTTATGATGTTCGACTTTCTCAGACCAGTTGCCAGCGCAAACTTGAC 617
Query 21201 AACAGACTTTAATGGCTCCGGACATTCATCAATCAGCCTTTGTGCTTCATGGGGCTCCAG 21260
||||| || | ||| || || || |||||||| || | || |||||| | |||||
Sbjct 616 GACAGATTTCAGTGGTTCGGGGCACTCATCAATAAGGCGTTTTGCTTCCTCCTTTTCCAG 557
Query 21261 CCAGCGGATCCGTTTATTCTTTGGTTG-AGGCACTTTAATAATTGGTGCCTTATCCAGCA 21319
||| | || || || || | || | || | || || | || || || ||||||
Sbjct 556 CCATCTGACTCGCTTGTT-TCTGACCGCTGGTATCTTGATGACAGGCGCTTTTTCCAGCC 498
Query 21320 TTTTCCATTCACGCTCTGCGGCTCTTAGTAGGGCCTTTATAAATGAAAGATGCGTAGCCT 21379
||||| || || ||||| || | || | ||||||||| | | ||||||| | ||||
Sbjct 497 ACTTCCAGTCGCGTTCTGCAGCACGGAGAATGGCCTTTATCATGGCAAGATGCTTTGCCT 438
Query 21380 TCGTTGCAACGGACGCTGGTTTTGGCGTGTATTCTGGAACAGGTTTCCCTTT---TTTCC 21436
| || | || |||| ||||| ||| |||||| |||| |||||
Sbjct 437 TTGTCTGAGTTGATACTGGCTTTGG------TTCATAAACAGGCAGTTCTTTACCTTTCC 384
Query 21437 TGCATGCTTCTGCCCTGAGTCTCCAGTTTTCCTCATGACGCCGGTTCGTCATT---TTCT 21493
|| ||| | ||||| | | | ||||| || | |||||| || || |
Sbjct 383 TG-ATG---GCGGCCTGAACTTTCTG-TTTCCATATTTC----TTTCGTCTTTCTGTTAT 333
Query 21494 GGATT---------GCTGAATAAATTTTTGATTCAGTAATGTCTCTTAGTTGCATTCCTG 21544
| ||| || || ||||| |||| || | || ||| | || || ||
Sbjct 332 GCATTCTGCTTACAGCAGAGTAAATCTTTGCCTCCGAGATATCTTTAAGCCTTATACCCT 273
Query 21545 CGAAATGTTGAAGCCAGAATCCGATCCGGCTTTTGTCATCGTCCAGTGATTTTTGATGTG 21604
| ||||||| ||||||||| | ||||||||||| || || || ||||||| || |
Sbjct 272 CAAAATGTTCAAGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAG 213
Query 21605 CTTTCTCTTCAAGCCACCTGACACACGCTTCCTCGAACGTTATATCAGGTA 21655
|||| || |||||||| || | || || || || || || | ||||||||
Sbjct 212 CTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTA 162
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 118514967784280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |