Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08]
165 sequences; 9,358,797 total letters
Query= NC_004348.1
Length=40679
Score E
Sequences producing significant alignments: (Bits) Value
seq57 417 2e-112
>seq57
Length=4629
Score = 417 bits (462), Expect = 2e-112
Identities = 694/991 (70%), Gaps = 16/991 (2%)
Strand=Plus/Minus
Query 3123 TCCTTATTTTTACTGTGGGACATATTTGGGACAGAAGTACCAAAAATCGAGTCAATTTGT 3182
||| || ||| | ||||||||||||||||||| | ||||||||| ||| ||||
Sbjct 1146 TCCATAATTTCAGAGTGGGACATATTTGGGACATTATCACCAAAAATGTCGTCTATTTTC 1087
Query 3183 CGAGCATGTTCAGTCAGGTGATTTGGTGCCAGATGAGCATATCTGCGAACCATTTCGATA 3242
| ||||| || |||| ||||| || || || |||||||| || ||||||||||| ||
Sbjct 1086 CTCGCATGCTCTGTCAAATGATTAGGCGCAAGGTGAGCATACCTACGAACCATTTCTATG 1027
Query 3243 GACTCCCAGCCACCCATTTCCTGCAATACCGAAATCGGAACGCCAGCCTGAACTAACCAG 3302
|||||||| || ||||||||||| | || || | || ||||| | ||||| | ||||
Sbjct 1026 GACTCCCATCCGCCCATTTCCTGAAGCACTGATAATGGGACGCCTGACTGAATCAGCCAG 967
Query 3303 CTTGCCCACGTGTGCCTCAGGTCATGAAAACGGAAGTCTTCAATGCCTGCTCGTTTTAAT 3362
|||||||| ||||| || |||||||| |||||||| |||||||| ||||| || |
Sbjct 966 CTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCAATTCCTGCACGACGACAA 907
Query 3363 GCTGACCTCCATGCAGTATTAGCGTCATAGCGCATCTTCCTCACTACAGGTGATTTAGTT 3422
||||| ||||| || || ||| |||||||||||| || |||| | | |||
Sbjct 906 GCTGATAGCCATGATGTCTTGCTGTCGATGCGCATCTTCCTGACCGCAGGCGTTGATGTT 847
Query 3423 CCGTCTGGCTTGGT--GCTGCTTTCCT-TGTAGACGAACACCCATTTGTGATGATTGCCT 3479
|| |||| || | | || || || | |||| | ||||||||||||||||| ||||||
Sbjct 846 CCATCTG-CTCGCTTAGCCGCCTTGGTATGTACA--AACACCCATTTGTGATGCTTGCCT 790
Query 3480 ATTTGCTTTTTCAGCACCCGGCAAGCAGTATCATTCAGCGCCACGCCAATGGCCTGATTG 3539
||||| | || ||| || || ||||| ||||||||||| |||||||| | ||
Sbjct 789 ATTTGATCACGCAACACTTTACAGGCGGTATCGTTCAGCGCCACACCAATGGCGCGGTTT 730
Query 3540 GACTTACTTTGTTCCGGGTGTATCCATGCCACCTTTCGCTGCATGTCTATCTGCTGCCAC 3599
|| || || | ||| || | | ||| || || |||||||||||| || || |||||
Sbjct 729 GATTTGCTCTCTTCTGGATTCACCCAGGCAACTCGTCGCTGCATGTCGATTTGTTGCCAT 670
Query 3600 TCCAGATTGATAATGTTAGACCGCCTTAAGCCAGTAGAAAGCGCAAACTCTACGACTGAC 3659
|||||||| || ||||| ||| || | ||||| | |||||||||| ||||| ||
Sbjct 669 TCCAGATTTATGATGTTCGACTTTCTCAGACCAGTTGCCAGCGCAAACTTGACGACAGAT 610
Query 3660 TTTAGCGGTTCCGGGCATTCATCAATCAACCTTTTTGCCTCGTGAGGCTCAAGCCAGCGG 3719
|| || ||||| ||||| |||||||| | | |||||| || | || ||||| | |
Sbjct 609 TTCAGTGGTTCGGGGCACTCATCAATAAGGCGTTTTGCTTCCTCCTTTTCCAGCCATCTG 550
Query 3720 ATACGCTTATTTTT--CGGCTGAGGAACTTTGATGATCGGAGCCTTATCCAGCATCTTCC 3777
| ||||| ||| | | ||| || | ||||||| || || || |||||| |||||
Sbjct 549 ACTCGCTTGTTTCTGACCGCT--GGTATCTTGATGACAGGCGCTTTTTCCAGCCACTTCC 492
Query 3778 ATTCGCGTTCAGCAGCCCGGAGGAGTGCCTTAATGAATGAAAGGTGAGTTGCTTTTGTGG 3837
| |||||||| ||||| ||||| | ||||| || | | ||| || |||| |||||
Sbjct 491 AGTCGCGTTCTGCAGCACGGAGAATGGCCTTTATCATGGCAAGATGCTTTGCCTTTGT-- 434
Query 3838 CTAA--TGCTGCCGGCTTAGGCTTGAATACCGGAGGTTGCTTCCCATTCTTCCTGCAAGC 3895
|| | || | | ||||| || | | || || ||| || || ||| | || ||
Sbjct 433 CTGAGTTGATACTGGCTTTGGTTCATAAACAGGCAGTTCTTTACCTTTCCTGATGGCGGC 374
Query 3896 TTCATCCATTAACTTCCAGTTTTCCTCATGCCGCCGATTAGTCA-TCTTCTGGATGGCGG 3954
| | | | ||||| |||| | | | ||| || ||| || | || |
Sbjct 373 CTGAACTTTCTGTTTCCATATTTCTTTCGTCTTTCTGTTATGCATTCTGCT-TACAGCAG 315
Query 3955 AGTAAATCTTCGTCTCGGTAATATCCTTCAACTGCATCCCTGCAAAATGCTGGAGCCAGA 4014
|||||||||| | ||| | ||||| || | | || || ||||||| | |||||||
Sbjct 314 AGTAAATCTTTGCCTCCGAGATATCTTTAAGCCTTATACCCTCAAAATGTTCAAGCCAGA 255
Query 4015 ATCCTATCCGACTCTTGTCATCATCCAGCGACTTCTTATGCGCCTTCTCCTCTAACCACC 4074
| | ||||| || || || ||| || || || |||| || || ||||| | ||| |
Sbjct 254 ACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATC 195
Query 4075 TGACACAGGCCTCCTCAAAAGTCATGTCAGG 4105
| | |||||||| |||||||| | |||||
Sbjct 194 TTAGGCAGGCCTCTTCAAAAGTGACATCAGG 164
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130050945180930
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |