Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08]
165 sequences; 9,358,797 total letters
Query= NC_005856.1
Length=94800
Score E
Sequences producing significant alignments: (Bits) Value
seq57 1871 0.0
>seq57
Length=4629
Score = 1871 bits (2074), Expect = 0.0
Identities = 1037/1037 (100%), Gaps = 0/1037 (0%)
Strand=Plus/Minus
Query 7810 CTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGC 7869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4629 CTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGC 4570
Query 7870 CAGTTGGTTATCGTTTTTCAGCAACCCCTTGTATCTGGCTTTCACGAAGCCGAACTGTCG 7929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4569 CAGTTGGTTATCGTTTTTCAGCAACCCCTTGTATCTGGCTTTCACGAAGCCGAACTGTCG 4510
Query 7930 CTTGATGATGCGAAATGGGTGCTCCACCCTGGCCCGGATGCTGGCTTTCATGTATTCGAT 7989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4509 CTTGATGATGCGAAATGGGTGCTCCACCCTGGCCCGGATGCTGGCTTTCATGTATTCGAT 4450
Query 7990 GTTGATGGCCGTTTTGTTCTTGCGTGGATGCTGTTTCAAGGTTCTTACCTTGCCGGGGCG 8049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4449 GTTGATGGCCGTTTTGTTCTTGCGTGGATGCTGTTTCAAGGTTCTTACCTTGCCGGGGCG 4390
Query 8050 CTCGGCGATCAGCCAGTCCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCCCCTTG 8109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4389 CTCGGCGATCAGCCAGTCCACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCCCCTTG 4330
Query 8110 GTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATT 8169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4329 GTAGCCGGCATCGGCTGAGACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATT 4270
Query 8170 GAGGTCATGCTCGTTGGCCGCGGTGGTGACCAGGCTGTGGGTCAGGCCACTCTTGGCATC 8229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4269 GAGGTCATGCTCGTTGGCCGCGGTGGTGACCAGGCTGTGGGTCAGGCCACTCTTGGCATC 4210
Query 8230 GACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCAT 8289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4209 GACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCAT 4150
Query 8290 CTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGATGGTGGC 8349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4149 CTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGATGGTGGC 4090
Query 8350 ATCGACCAAGGTGCCTTGAGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGT 8409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4089 ATCGACCAAGGTGCCTTGAGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGT 4030
Query 8410 CTTGAACAATTGGCGGGCCAGTTGATGCTGCTCCAGCAGGTGGCGGAAATTCATGATGGT 8469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4029 CTTGAACAATTGGCGGGCCAGTTGATGCTGCTCCAGCAGGTGGCGGAAATTCATGATGGT 3970
Query 8470 GGTGCGGTCCGGCAAGGCGCTATCCAGGGATAACCGGGCAAACAGACGCATGGAGGCGAT 8529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3969 GGTGCGGTCCGGCAAGGCGCTATCCAGGGATAACCGGGCAAACAGACGCATGGAGGCGAT 3910
Query 8530 TTCGTACAGAGCATCTTCCATCGCGCCATCGCTCAGGTTGTACCAATGCTGCATGCAGTG 8589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3909 TTCGTACAGAGCATCTTCCATCGCGCCATCGCTCAGGTTGTACCAATGCTGCATGCAGTG 3850
Query 8590 AATGCGTAGCATGGTTTCCAGCGGATAAGGTCGCCGGCCATTACCAGCCTTGGGGTAAAA 8649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3849 AATGCGTAGCATGGTTTCCAGCGGATAAGGTCGCCGGCCATTACCAGCCTTGGGGTAAAA 3790
Query 8650 CGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAA 8709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3789 CGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAA 3730
Query 8710 AATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTG 8769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3729 AATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTG 3670
Query 8770 ATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGG 8829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3669 ATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGG 3610
Query 8830 ACTTGTTCGCACCTTCC 8846
|||||||||||||||||
Sbjct 3609 ACTTGTTCGCACCTTCC 3593
Score = 279 bits (308), Expect = 3e-70
Identities = 154/154 (100%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 7649 TAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTT 7708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 154 TAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTT 95
Query 7709 CATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTC 7768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 94 CATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTC 35
Query 7769 TTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGT 7802
||||||||||||||||||||||||||||||||||
Sbjct 34 TTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 303234590212965
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