Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08] 165 sequences; 9,358,797 total letters Query= NC_006949.1 Length=46900 Score E Sequences producing significant alignments: (Bits) Value seq57 389 1e-103 >seq57 Length=4629 Score = 389 bits (430), Expect = 1e-103 Identities = 697/1010 (69%), Gaps = 16/1010 (2%) Strand=Plus/Minus Query 26402 TTACGTATTATTCGTACCTTCCTTATTTTTATTGTGGGACATATTTGGGACAGAAGTACC 26461 ||||| || || || | ||| || ||| | ||||||||||||||||||| | ||| Sbjct 1165 TTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACATATTTGGGACATTATCACC 1106 Query 26462 AAAAATCGAGTCAATTTGTCGAGCATGTTCAGTCAGGTGATTTGGTGCCAGATGAGCATA 26521 |||||| ||| |||| | ||||| || |||| ||||| || || || |||||||| Sbjct 1105 AAAAATGTCGTCTATTTTCCTCGCATGCTCTGTCAAATGATTAGGCGCAAGGTGAGCATA 1046 Query 26522 TCTGCGAACCATTTCGATAGACTCCCAGCCACCCATTTCCTGCAATACCGAAATCGGAAC 26581 || ||||||||||| || |||||||| || ||||||||||| | || || | || || Sbjct 1045 CCTACGAACCATTTCTATGGACTCCCATCCGCCCATTTCCTGAAGCACTGATAATGGGAC 986 Query 26582 GCCAGCCTGAACTAACCAACTTGCCCACGTGTGCCTCAGGTCATGAAAACGGAAGTCTTC 26641 ||| | ||||| | ||| |||||||| ||||| || |||||||| |||||||| ||||| Sbjct 985 GCCTGACTGAATCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTC 926 Query 26642 AATGCCCGCTCGTTTTAATGCTGCCCTCCATGCCGTATTAGCGTCATAGCGCATCTTCCT 26701 ||| || || || | |||| ||||| || || ||| |||||||||||| Sbjct 925 AATTCCTGCACGACGACAAGCTGATAGCCATGATGTCTTGCTGTCGATGCGCATCTTCCT 866 Query 26702 CACTACAGGTGATTTAGTTCCGTCTGGTTTGGT-GCTGCTTTCCT-TGTAGACGAACACC 26759 || |||| | | ||||| |||| | | || || || | ||| || |||||| Sbjct 865 GACCGCAGGCGTTGATGTTCCATCTGCTCGCTTAGCCGCCTTGGTATGT--ACAAACACC 808 Query 26760 CATTTGTGATGATTGCCGATTTGCTTTTTCAGCACCCGGCAAGCGGTATCATTCAGCGCC 26819 ||||||||||| ||||| ||||| | || ||| || |||||||| ||||||||| Sbjct 807 CATTTGTGATGCTTGCCTATTTGATCACGCAACACTTTACAGGCGGTATCGTTCAGCGCC 748 Query 26820 ACTCCAATGGCATGATTAGACTTGCTTTGTTCCGGGTGTATCCATGCCACCTTTCGTTGC 26879 || |||||||| | || || ||||| | ||| || | | ||| || || ||| ||| Sbjct 747 ACACCAATGGCGCGGTTTGATTTGCTCTCTTCTGGATTCACCCAGGCAACTCGTCGCTGC 688 Query 26880 ATGTCTATCTGCTGCCACTCCAGATTGATAATGTTAGACCGCCTTAAGCCAGTAGAAAGC 26939 ||||| || || ||||| |||||||| || ||||| ||| || | ||||| | ||| Sbjct 687 ATGTCGATTTGTTGCCATTCCAGATTTATGATGTTCGACTTTCTCAGACCAGTTGCCAGC 628 Query 26940 GCAAACTCTACGACTGACTTTAGCGGTTCCGGGCATTCATCAATCAACCTTTTTGCCTCG 26999 ||||||| ||||| || || || ||||| ||||| |||||||| | | |||||| || Sbjct 627 GCAAACTTGACGACAGATTTCAGTGGTTCGGGGCACTCATCAATAAGGCGTTTTGCTTCC 568 Query 27000 TGAGGCTCAAGCCAGCGAATACGCTTATTTTT--CGGCTGAGGAACTTTAACGATCGGAG 27057 | || ||||| | | ||||| ||| | | ||| || | || | || || | Sbjct 567 TCCTTTTCCAGCCATCTGACTCGCTTGTTTCTGACCGCT--GGTATCTTGATGACAGGCG 510 Query 27058 CCTTATCCAGCATCTTCCATTCGCGTTCAGCAGTTCGTAGGAGTGCCTTAATGAATGAAA 27117 | || |||||| |||||| |||||||| |||| || || | ||||| || | | || Sbjct 509 CTTTTTCCAGCCACTTCCAGTCGCGTTCTGCAGCACGGAGAATGGCCTTTATCATGGCAA 450 Query 27118 GGTGAGTTGCTTTTGTGGCTATCGCTGCTGGCTTAGGTTTGAATACCGGAGGCTGCTTTC 27177 | || |||| ||||| | | | ||||||| |||| | || || | | || | Sbjct 449 GATGCTTTGCCTTTGTCTGAGTTGATACTGGCTTTGGTTCATAAACAGGCAGTTCTTTAC 390 Query 27178 CTTTCTTCCTGCAAGCTTCTTCCATCATCTTCCAGTTTTCCTCGTGACGACGATTTGTCA 27237 ||||| | || || | | || ||||| |||| | || | | ||| | Sbjct 389 CTTTCCTGATGGCGGCCTGAACTTTCTGTTTCCATATTTC----TTTCGTCTTTCTGTTA 334 Query 27238 T--CTTCTG--GATGGCGGAGTAAATCTTCGTTTCGGTAATATCTTTCAACTGAATCCCT 27293 | ||||| | || ||||||||||| | || | |||||||| | | || || Sbjct 333 TGCATTCTGCTTACAGCAGAGTAAATCTTTGCCTCCGAGATATCTTTAAGCCTTATACCC 274 Query 27294 GCAAAATGCTGGAGCCAGAATCCTATCCGGCTTTTGTCATCGTCCAGCGACTTCTTATGC 27353 ||||||| | |||||||| | ||||||||||| || || || || || |||| Sbjct 273 TCAAAATGTTCAAGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCA 214 Query 27354 GCCTTCTCCTCTAACCACCTGACACAGGCTTCCTCAAAAGTCATGTCAGG 27403 || || ||||| | ||| || | ||||| || |||||||| | ||||| Sbjct 213 GCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGG 164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149958106175260