Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08] 165 sequences; 9,358,797 total letters Query= NC_011551.1 Length=39867 Score E Sequences producing significant alignments: (Bits) Value seq57 342 1e-89 >seq57 Length=4629 Score = 342 bits (378), Expect = 1e-89 Identities = 729/1077 (68%), Gaps = 20/1077 (2%) Strand=Plus/Minus Query 25685 CTTCTAAGCCGTAGGTCACTGGTTCGAATCCAGTAGGGCGTACCAATAAAAT-CAAGGGG 25743 |||||||| ||| || | | ||||||||||| | |||||| ||| || ||| ||| | Sbjct 1225 CTTCTAAGTCGTGGGCCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAG 1166 Query 25744 TTACGTAGT-TTTGTCTCCTAGGAATTATTTAAAAGTGC--CAGATTAGTGACATCGTTT 25800 ||||| | ||| | |||| || |||| | |||| || ||| | ||||| | Sbjct 1165 TTACGCCTTCTTTATATCCTCC--ATAATTTCAGAGTGGGACATATTTGGGACATTATCA 1108 Query 25801 GCCAACGCCTCGTCAATTTTCTTGGCATGCTCAGTCAGGTGGCTGGGCGAAAGGTGTGCG 25860 | || ||||| |||||| | |||||||| |||| || | |||| |||||| || Sbjct 1107 CCAAAAATGTCGTCTATTTTCCTCGCATGCTCTGTCAAATGATTAGGCGCAAGGTGAGCA 1048 Query 25861 TAACGACGTACCATTTCGATAGATTCCCAGCCGCCCATTTCCTGCAAAACAGAGAGTGGA 25920 || | ||| |||||||| || || ||||| |||||||||||||| | || || | ||| Sbjct 1047 TACCTACGAACCATTTCTATGGACTCCCATCCGCCCATTTCCTGAAGCACTGATAATGGG 988 Query 25921 ACACCTGATTGTATCAGCCAACTTGCCCAAGTATGTCTAAGATCATGAAAACGAAAATTT 25980 || ||||| || |||||||| |||||||| || ||||| || ||||| ||||| |||| | Sbjct 987 ACGCCTGACTGAATCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCT 928 Query 25981 TCTATTCCGGCTCGTTTTAATGCCGCCCTCCATGCCGTATTAGAATCGACCCGCATTTTT 26040 || ||||| || || | || | ||||| || || |||| ||||| || Sbjct 927 TCAATTCCTGCACGACGACAAGCTGATAGCCATGATGTCTTGCTGTCGATGCGCATCTTC 868 Query 26041 CTAATCGAATTTGTTTGTGAACCATCAGATCGCTTTGCTGACATTGTATGTACGAATACC 26100 || | || | ||| || ||||| | |||||| || | | | |||||||| || ||| Sbjct 867 CTGACCGCAGGCGTTGATGTTCCATCTGCTCGCTTAGCCGCCTTGGTATGTACAAACACC 808 Query 26101 CATTTTTGATGATTACCCAATTG-TCGCGTCAGAATACAGCAAGCCGTATCGTTTAGAGC 26159 ||||| ||||| || || | ||| || || | | | | || || |||||||| || || Sbjct 807 CATTTGTGATGCTTGCCTATTTGATCACGCAACACTTTA-CAGGCGGTATCGTTCAGCGC 749 Query 26160 TACACCTATAGC---TTTTCCCGATTTGCTGTTTTCTGGCTCTATCCAGGCAACTTTTCT 26216 ||||| || || ||| |||||||| | |||||| | | |||||||||| || Sbjct 748 CACACCAATGGCGCGGTTT---GATTTGCTCTCTTCTGGATTCACCCAGGCAACTCGTCG 692 Query 26217 TTGCATATCAATTTGTGACCACGCTAAATTAATGATATTTGAACGACGTAACCCGGTTGC 26276 ||||| || |||||| ||| | | ||| ||||| || || | | || ||||| Sbjct 691 CTGCATGTCGATTTGTTGCCATTCCAGATTTATGATGTTCGACTTTCTCAGACCAGTTGC 632 Query 26277 CAGCGCAAATTCAACCGTCGATCTAAGGGGTTCAGGACATTCATTGATTAATCTTTCTGC 26336 ||||||||| | || ||| | || ||||| || || |||| || | | || ||| Sbjct 631 CAGCGCAAACTTGACGACAGATTTCAGTGGTTCGGGGCACTCATCAATAAGGCGTTTTGC 572 Query 26337 TTCATCCGGTTCTAACCATCTAATACGTTTTTCTCTAGCCGATGGAACCTTAATAACCGG 26396 ||| ||| ||| | |||||| | || || | ||| ||| ||| | ||| || || || Sbjct 571 TTCCTCCTTTTCCAGCCATCTGACTCGCTTGTTTCTGACCGCTGGTATCTTGATGACAGG 512 Query 26397 TGATTTTTCTATCCATTTCCAATCTCTTTCAGCAGATCTCATCATTGATTTAAGTAGTGC 26456 | |||||| | ||| ||||| || | ||| |||| | | || | || | | || Sbjct 511 CGCTTTTTCCAGCCACTTCCAGTCGCGTTCTGCAGCACGGAGAATGGCCTTTATCATGGC 452 Query 26457 CAAATGCTTAGCTTTTGTTGCTATAGAAACTTCTTTCGCTTGATAAGCGGGTATTTCTAT 26516 | |||||| || ||||| | || ||| || | || |||| | || | |||| | Sbjct 451 AAGATGCTTTGCCTTTGTCTGAGTTGATACTGGCTTTGGTTCATAAACAGGCAGTTCTTT 392 Query 26517 TCCTTTTCTTTTTGCTGAATTAACTCTACTTTTCCATCTTAATTGTTGCTGCCTATTTTT 26576 ||||| || | || | | |||| | ||||||| || || || || || | Sbjct 391 ACCTTTCCTGATGGCGGCCTGAACTTTCTGTTTCCATATTTCTTTCGTCTTTCTGTTATG 332 Query 26577 CATTTTGCTAATAGCACTATATATTTTTGCTTCTGTCATATCTTTTAATCGGGTACCGCT 26636 |||| |||| | |||| || || ||||| || | |||||||| | | |||| || Sbjct 331 CATTCTGCTTACAGCAGAGTAAATCTTTGCCTCCGAGATATCTTTAAGCCTTATACC-CT 273 Query 26637 GAAA---TACAGTAGCCAAAAACCAAGTCTACCCTTGTCATCGTCTAAAGATTTCTTGTT 26693 ||| | || ||||| || ||| | | || || || | |||||| || | Sbjct 272 CAAAATGTTCA--AGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATC 215 Query 26694 AGCCTTCTCTTCAATCCATCTCAAGCAGGCTTCGTCAAATGTGACATTAGGAAAATC 26750 ||| || || |||| |||||| | |||||| || ||||| ||||||| ||| ||||| Sbjct 214 AGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATC 158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127452550272170