Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08]
165 sequences; 9,358,797 total letters
Query= NC_011551.1
Length=39867
Score E
Sequences producing significant alignments: (Bits) Value
seq57 342 1e-89
>seq57
Length=4629
Score = 342 bits (378), Expect = 1e-89
Identities = 729/1077 (68%), Gaps = 20/1077 (2%)
Strand=Plus/Minus
Query 25685 CTTCTAAGCCGTAGGTCACTGGTTCGAATCCAGTAGGGCGTACCAATAAAAT-CAAGGGG 25743
|||||||| ||| || | | ||||||||||| | |||||| ||| || ||| ||| |
Sbjct 1225 CTTCTAAGTCGTGGGCCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAG 1166
Query 25744 TTACGTAGT-TTTGTCTCCTAGGAATTATTTAAAAGTGC--CAGATTAGTGACATCGTTT 25800
||||| | ||| | |||| || |||| | |||| || ||| | ||||| |
Sbjct 1165 TTACGCCTTCTTTATATCCTCC--ATAATTTCAGAGTGGGACATATTTGGGACATTATCA 1108
Query 25801 GCCAACGCCTCGTCAATTTTCTTGGCATGCTCAGTCAGGTGGCTGGGCGAAAGGTGTGCG 25860
| || ||||| |||||| | |||||||| |||| || | |||| |||||| ||
Sbjct 1107 CCAAAAATGTCGTCTATTTTCCTCGCATGCTCTGTCAAATGATTAGGCGCAAGGTGAGCA 1048
Query 25861 TAACGACGTACCATTTCGATAGATTCCCAGCCGCCCATTTCCTGCAAAACAGAGAGTGGA 25920
|| | ||| |||||||| || || ||||| |||||||||||||| | || || | |||
Sbjct 1047 TACCTACGAACCATTTCTATGGACTCCCATCCGCCCATTTCCTGAAGCACTGATAATGGG 988
Query 25921 ACACCTGATTGTATCAGCCAACTTGCCCAAGTATGTCTAAGATCATGAAAACGAAAATTT 25980
|| ||||| || |||||||| |||||||| || ||||| || ||||| ||||| |||| |
Sbjct 987 ACGCCTGACTGAATCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCT 928
Query 25981 TCTATTCCGGCTCGTTTTAATGCCGCCCTCCATGCCGTATTAGAATCGACCCGCATTTTT 26040
|| ||||| || || | || | ||||| || || |||| ||||| ||
Sbjct 927 TCAATTCCTGCACGACGACAAGCTGATAGCCATGATGTCTTGCTGTCGATGCGCATCTTC 868
Query 26041 CTAATCGAATTTGTTTGTGAACCATCAGATCGCTTTGCTGACATTGTATGTACGAATACC 26100
|| | || | ||| || ||||| | |||||| || | | | |||||||| || |||
Sbjct 867 CTGACCGCAGGCGTTGATGTTCCATCTGCTCGCTTAGCCGCCTTGGTATGTACAAACACC 808
Query 26101 CATTTTTGATGATTACCCAATTG-TCGCGTCAGAATACAGCAAGCCGTATCGTTTAGAGC 26159
||||| ||||| || || | ||| || || | | | | || || |||||||| || ||
Sbjct 807 CATTTGTGATGCTTGCCTATTTGATCACGCAACACTTTA-CAGGCGGTATCGTTCAGCGC 749
Query 26160 TACACCTATAGC---TTTTCCCGATTTGCTGTTTTCTGGCTCTATCCAGGCAACTTTTCT 26216
||||| || || ||| |||||||| | |||||| | | |||||||||| ||
Sbjct 748 CACACCAATGGCGCGGTTT---GATTTGCTCTCTTCTGGATTCACCCAGGCAACTCGTCG 692
Query 26217 TTGCATATCAATTTGTGACCACGCTAAATTAATGATATTTGAACGACGTAACCCGGTTGC 26276
||||| || |||||| ||| | | ||| ||||| || || | | || |||||
Sbjct 691 CTGCATGTCGATTTGTTGCCATTCCAGATTTATGATGTTCGACTTTCTCAGACCAGTTGC 632
Query 26277 CAGCGCAAATTCAACCGTCGATCTAAGGGGTTCAGGACATTCATTGATTAATCTTTCTGC 26336
||||||||| | || ||| | || ||||| || || |||| || | | || |||
Sbjct 631 CAGCGCAAACTTGACGACAGATTTCAGTGGTTCGGGGCACTCATCAATAAGGCGTTTTGC 572
Query 26337 TTCATCCGGTTCTAACCATCTAATACGTTTTTCTCTAGCCGATGGAACCTTAATAACCGG 26396
||| ||| ||| | |||||| | || || | ||| ||| ||| | ||| || || ||
Sbjct 571 TTCCTCCTTTTCCAGCCATCTGACTCGCTTGTTTCTGACCGCTGGTATCTTGATGACAGG 512
Query 26397 TGATTTTTCTATCCATTTCCAATCTCTTTCAGCAGATCTCATCATTGATTTAAGTAGTGC 26456
| |||||| | ||| ||||| || | ||| |||| | | || | || | | ||
Sbjct 511 CGCTTTTTCCAGCCACTTCCAGTCGCGTTCTGCAGCACGGAGAATGGCCTTTATCATGGC 452
Query 26457 CAAATGCTTAGCTTTTGTTGCTATAGAAACTTCTTTCGCTTGATAAGCGGGTATTTCTAT 26516
| |||||| || ||||| | || ||| || | || |||| | || | |||| |
Sbjct 451 AAGATGCTTTGCCTTTGTCTGAGTTGATACTGGCTTTGGTTCATAAACAGGCAGTTCTTT 392
Query 26517 TCCTTTTCTTTTTGCTGAATTAACTCTACTTTTCCATCTTAATTGTTGCTGCCTATTTTT 26576
||||| || | || | | |||| | ||||||| || || || || || |
Sbjct 391 ACCTTTCCTGATGGCGGCCTGAACTTTCTGTTTCCATATTTCTTTCGTCTTTCTGTTATG 332
Query 26577 CATTTTGCTAATAGCACTATATATTTTTGCTTCTGTCATATCTTTTAATCGGGTACCGCT 26636
|||| |||| | |||| || || ||||| || | |||||||| | | |||| ||
Sbjct 331 CATTCTGCTTACAGCAGAGTAAATCTTTGCCTCCGAGATATCTTTAAGCCTTATACC-CT 273
Query 26637 GAAA---TACAGTAGCCAAAAACCAAGTCTACCCTTGTCATCGTCTAAAGATTTCTTGTT 26693
||| | || ||||| || ||| | | || || || | |||||| || |
Sbjct 272 CAAAATGTTCA--AGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATC 215
Query 26694 AGCCTTCTCTTCAATCCATCTCAAGCAGGCTTCGTCAAATGTGACATTAGGAAAATC 26750
||| || || |||| |||||| | |||||| || ||||| ||||||| ||| |||||
Sbjct 214 AGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATC 158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127452550272170
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |