Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08]
165 sequences; 9,358,797 total letters
Query= NC_011802.1
Length=41941
Score E
Sequences producing significant alignments: (Bits) Value
seq57 407 4e-109
>seq57
Length=4629
Score = 407 bits (450), Expect = 4e-109
Identities = 689/989 (70%), Gaps = 12/989 (1%)
Strand=Plus/Minus
Query 3106 TCCTTATTTTTACTGTGGGACATATTTGGGACAGAAGTACCAAAAATCGAGTCAATTTGT 3165
||| || ||| | ||||||||||||||||||| | ||||||||| ||| ||||
Sbjct 1146 TCCATAATTTCAGAGTGGGACATATTTGGGACATTATCACCAAAAATGTCGTCTATTTTC 1087
Query 3166 CGAGCATGTTCAGTCAGGTGATTTGGTGCCAGATGAGCATATCTGCGAACCATTTCGATA 3225
| ||||| || |||| ||||| || || || |||||||| || ||||||||||| ||
Sbjct 1086 CTCGCATGCTCTGTCAAATGATTAGGCGCAAGGTGAGCATACCTACGAACCATTTCTATG 1027
Query 3226 GACTCCCAGCCACCCATTTCCTGCAATACCGAAATCGGAACGCCAGCCTGAACTAACCAG 3285
|||||||| || ||||||||||| | || || | || ||||| | ||||| | ||||
Sbjct 1026 GACTCCCATCCGCCCATTTCCTGAAGCACTGATAATGGGACGCCTGACTGAATCAGCCAG 967
Query 3286 CTTGCCCACGTGTGCCTCAGGTCATGAAAACGGAAGTCTTCAATGCCTGCTCGTTTTAAT 3345
|||||||| ||||| || |||||||| |||||||| |||||||| ||||| || |
Sbjct 966 CTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCAATTCCTGCACGACGACAA 907
Query 3346 GCTGACCTCCATGCAGTATTAGCGTCATAGCGCATCTTCCTCACTACAGGTGATTTAGTT 3405
||||| ||||| || || ||| |||||||||||| || |||| | | |||
Sbjct 906 GCTGATAGCCATGATGTCTTGCTGTCGATGCGCATCTTCCTGACCGCAGGCGTTGATGTT 847
Query 3406 CCGTCTGGCTTGGT--GCTGCTTTCCT-TGTAGACGAACACCCATTTGTGATGATTGCCT 3462
|| |||| || | | || || || | |||| | ||||||||||||||||| ||||||
Sbjct 846 CCATCTG-CTCGCTTAGCCGCCTTGGTATGTACA--AACACCCATTTGTGATGCTTGCCT 790
Query 3463 ATTTGCTTTTTCAGCACCCGGCAAGCAGTATCATTCAGCGCCACGCCAATGGCCTGATTG 3522
||||| | || ||| || || ||||| ||||||||||| |||||||| | ||
Sbjct 789 ATTTGATCACGCAACACTTTACAGGCGGTATCGTTCAGCGCCACACCAATGGCGCGGTTT 730
Query 3523 GACTTACTTTGTTCCGGGTGTATCCATGCCACCTTTCGCTGCATGTCTATCTGCTGCCAC 3582
|| || || | ||| || | | ||| || || |||||||||||| || || |||||
Sbjct 729 GATTTGCTCTCTTCTGGATTCACCCAGGCAACTCGTCGCTGCATGTCGATTTGTTGCCAT 670
Query 3583 TCCATATTGATAATGTTAGACCGCCTTAAGCCAGTAGAAAGCGCAAACTCTACGACTGAC 3642
|||| ||| || ||||| ||| || | ||||| | |||||||||| ||||| ||
Sbjct 669 TCCAGATTTATGATGTTCGACTTTCTCAGACCAGTTGCCAGCGCAAACTTGACGACAGAT 610
Query 3643 TTTAGCGGTTCCGGGCATTCATCAATCAACCTTTTTGCCTCGTGAGGCTCAAGCCAGCGG 3702
|| || ||||| ||||| |||||||| | | |||||| || | || ||||| | |
Sbjct 609 TTCAGTGGTTCGGGGCACTCATCAATAAGGCGTTTTGCTTCCTCCTTTTCCAGCCATCTG 550
Query 3703 ATACGCTTATTTTT--CGGCTGAGGAACTTTGATGATCGGAGCCTTATCCAGCATCTTCC 3760
| ||||| ||| | | ||| || | ||||||| || || || |||||| |||||
Sbjct 549 ACTCGCTTGTTTCTGACCGCT--GGTATCTTGATGACAGGCGCTTTTTCCAGCCACTTCC 492
Query 3761 ATTCGCGTTCAGCAGCCCGGAGGAGTGCCTTAATGAATGAAAGGTGAGTTGCTTTTGTGG 3820
| |||||||| ||||| ||||| | ||||| || | | ||| || |||| |||||
Sbjct 491 AGTCGCGTTCTGCAGCACGGAGAATGGCCTTTATCATGGCAAGATGCTTTGCCTTTGTCT 432
Query 3821 CTACTGCTGCCGGCTTAGGCTTGAATACTGGAGGCTGCTTCCCATTCTTCCTGCAAGCTT 3880
|| | | ||||| || | | || || | | || || ||| | || || |
Sbjct 431 GAGTTGATACTGGCTTTGGTTCATAAACAGGCAGTTCTTTACCTTTCCTGATGGCGGCCT 372
Query 3881 CATCCATTAACTTCCAGTTTTCCTCATGCCGCCGATTAGTCA-TCTTCTGGATGGCGGAG 3939
| | | ||||| |||| | | | ||| || ||| || | || |||
Sbjct 371 GAACTTTCTGTTTCCATATTTCTTTCGTCTTTCTGTTATGCATTCTGCT-TACAGCAGAG 313
Query 3940 TAAATCTTCGTCTCGGTAATATCCTTCAACTGCATCCCTGCAAAATGCTGGAGCCAGAAT 3999
|||||||| | ||| | ||||| || | | || || ||||||| | ||||||||
Sbjct 312 TAAATCTTTGCCTCCGAGATATCTTTAAGCCTTATACCCTCAAAATGTTCAAGCCAGAAC 253
Query 4000 CCTATCCGACTCTTGTCATCATCCAGCGACTTCTTATGCGCCTTCTCCTCTAACCACCTG 4059
| ||||| || || || ||| || || || |||| || || ||||| | ||| ||
Sbjct 252 TCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTT 193
Query 4060 ACACAGGCCTCCTCAAAAGTCATGTCAGG 4088
| |||||||| |||||||| | |||||
Sbjct 192 AGGCAGGCCTCTTCAAAAGTGACATCAGG 164
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 134089337268190
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |