Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08]
165 sequences; 9,358,797 total letters
Query= NC_011976.1
Length=43016
Score E
Sequences producing significant alignments: (Bits) Value
seq57 747 0.0
>seq57
Length=4629
Score = 747 bits (828), Expect = 0.0
Identities = 818/1083 (76%), Gaps = 12/1083 (1%)
Strand=Plus/Minus
Query 21598 GAACTTCTAAGCCGTGGGTCGCAGGTTCGAATCCTGCAGGGCGCACCATTATATATCAAC 21657
|| |||||||| |||||| ||||||||||||||||||||||||| |||||| | ||||
Sbjct 1228 GACCTTCTAAGTCGTGGGCCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAAT 1169
Query 21658 TGGTTACGCCTCTTTAATTCCCTCCTTATTTTCCATATGGGACATATTTGTGACATCATC 21717
||||||||| || || ||||| || |||| ||||||||||||| ||||| |||
Sbjct 1168 CAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACATATTTGGGACATTATC 1109
Query 21718 ACTGAAAATCGAGTCAATTTGCTTCGCGTGTTCCGTTAAATGATTCGGCGCAAGGTGAGC 21777
|| ||||| ||| |||| | |||| || || || |||||||| ||||||||||||||
Sbjct 1108 ACCAAAAATGTCGTCTATTTTCCTCGCATGCTCTGTCAAATGATTAGGCGCAAGGTGAGC 1049
Query 21778 ATATCGGCGCACCATATCGATGCTCTCCCATCCTCCCATTTCCTGCAGAACAGAAAGCGG 21837
||| | || ||||| || ||| ||||||||| ||||||||||| || || || | ||
Sbjct 1048 ATACCTACGAACCATTTCTATGGACTCCCATCCGCCCATTTCCTGAAGCACTGATAATGG 989
Query 21838 CACTCCGGACTGAATTAGCCAACTGGCCCACGTGTGCCTCAGATCGTGGAAACGGAAATC 21897
|| || |||||||| ||||| || ||||| ||||| || || || ||||||||||||||
Sbjct 988 GACGCCTGACTGAATCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATC 929
Query 21898 CTCAATTCCAGCCCGGCGGCAAGCTGCATTCCATGCTCTCTGGTCATCGACGCGCATCTT 21957
|||||||| || || || ||||||| ||||| | ||| | |||| |||||||||
Sbjct 928 TTCAATTCCTGCACGACGACAAGCTGATAGCCATGATGTCTTGCTGTCGATGCGCATCTT 869
Query 21958 TCTGATAGTCGGAGTCTTTGAGCCATCGGGCCGGATGCCTTCTTTCGTATGCACGAACAC 22017
|||| | || || || ||||| | || | | | || ||||| || |||||
Sbjct 868 CCTGACCGCAGGCGTTGATGTTCCATCTGCTCGCTTAGCCGCCTTGGTATGTACAAACAC 809
Query 22018 CCATTTATGATGCTTACCAATCTGTTCACGCAATACCTTACAGGCAGTGTCATTTAGCGC 22077
|||||| |||||||| || || || |||||||| || |||||||| || || || |||||
Sbjct 808 CCATTTGTGATGCTTGCCTATTTGATCACGCAACACTTTACAGGCGGTATCGTTCAGCGC 749
Query 22078 TACGCCAATAGCGCGGTTTGACTTGCTGTCTTCAGGGTTCACCCAGGCAACACGACGTTG 22137
|| ||||| ||||||||||| ||||| ||||| || |||||||||||||| || || ||
Sbjct 748 CACACCAATGGCGCGGTTTGATTTGCTCTCTTCTGGATTCACCCAGGCAACTCGTCGCTG 689
Query 22138 CATGTCAATCTGTTGCCATTCCATATTGATGATGTTAGACCGCCTAAGTCCTGTTGCCAG 22197
|||||| || ||||||||||||| ||| |||||||| ||| || || || ||||||||
Sbjct 688 CATGTCGATTTGTTGCCATTCCAGATTTATGATGTTCGACTTTCTCAGACCAGTTGCCAG 629
Query 22198 CGCAAATTTAACAACAGATTTCAACGGTTCAGGGCATTCATCAATCAGGCGTTTTGCCTC 22257
|||||| || || |||||||||| ||||| ||||| |||||||| ||||||||||| ||
Sbjct 628 CGCAAACTTGACGACAGATTTCAGTGGTTCGGGGCACTCATCAATAAGGCGTTTTGCTTC 569
Query 22258 TTCTTTCTCCAGCCATCTGACGCGTTTGTTTCTGACGGCTGGAACCTTGATTACAGGCGC 22317
|| || |||||||||||||| || ||||||||||| ||||| | |||||| ||||||||
Sbjct 568 CTCCTTTTCCAGCCATCTGACTCGCTTGTTTCTGACCGCTGGTATCTTGATGACAGGCGC 509
Query 22318 TTTCTCCAGCCATTTCCAGTCACGTTCTGCTGCACGCAGAATAGCCTTCATTAATGCCAG 22377
||| |||||||| |||||||| |||||||| ||||| ||||| ||||| || | || ||
Sbjct 508 TTTTTCCAGCCACTTCCAGTCGCGTTCTGCAGCACGGAGAATGGCCTTTATCATGGCAAG 449
Query 22378 GTGTTTGGCCTTAGTGGAGGTTTTGACCGGTTTAGCTGAATAGATTGGTGCAGGTTCT-- 22435
|| || ||||| || ||| || || || | | ||| | | ||| |||||
Sbjct 448 ATGCTTTGCCTTTGTCTGAGTTGATACTGGCTTTGGTTCATAAACAG--GCA-GTTCTTT 392
Query 22436 -CCATTCTTCTGCGCCGCGGCAGCTTTGATTTTCCATATCTCAAGCTGTTTGCGGTTGCT 22494
|| ||| | || || | |||| ||||||||| || | || | |||
Sbjct 391 ACCTTTCCTGATGGCGGCCTGAACTTTCTGTTTCCATATTTCTTTCGTCTTTCTGTTATG 332
Query 22495 CATCTTGTTTACTGCTAAGTAAATCTTTTGCTCGGTTACATCCTTTAACCGTACTCCCTC 22554
||| || |||| || ||||||||||| ||| | | ||| || | || || |||||
Sbjct 331 CATTCTGCTTACAGCAGAGTAAATCTTTGCCTCCGAGATATCTTTAAGCCTTATACCCTC 272
Query 22555 AAAATGCGCCAGCCAGAAAGCCATACGGCTACGGTCATCT---TTCAGTGATTTCTTCTC 22611
|||||| | |||||||| | || ||||| | |||| | || ||||| || ||
Sbjct 271 AAAATGTTCAAGCCAGAACTCAATCCGGCT---TTTATCTGAATCGAGAGATTTTTTATC 215
Query 22612 CGCTTTTTCCTCAAGCCAGCGCATGCAGGCATCATCAAACGTTACATCAGGGAAATCACC 22671
||||||||||||||||| | | |||||| || ||||| || |||||||| ||||| ||
Sbjct 214 AGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCC 155
Query 22672 AAG 22674
||
Sbjct 154 TAG 152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 137529330527940
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |