Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08] 165 sequences; 9,358,797 total letters Query= NC_015265.1 Length=37236 Score E Sequences producing significant alignments: (Bits) Value seq57 138 3e-28 >seq57 Length=4629 Score = 138 bits (152), Expect = 3e-28 Identities = 330/492 (67%), Gaps = 13/492 (3%) Strand=Plus/Plus Query 9180 GTGATCGGGCCGTATTACCCGAAGGGCGAGCGTGGCCGGCCGCCGATTGGCCTGGAACGG 9239 || |||| ||||| |||||| |||| | |||||||| || | |||||| Sbjct 3778 GTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGCTGGAAACC 3837 Query 9240 ATGCTGCGGATCTACTTGCTGCAGCAGTGGTACGGGTTGTCGGACGAAGGGCTTGAAGAT 9299 ||||| || || ||| ||||||| |||||| || || | | | | |||||| Sbjct 3838 ATGCTACGCATTCACTGCATGCAGCATTGGTACAACCTGAGCGATGGCGCGATGGAAGAT 3897 Query 9300 GCGCTCTACGACAGCATCGCGATGCGCGCCTTCGC--GGGCATCGACCTGGCGCGCGAGA 9357 || || ||||| | | | | ||||| || || || ||| ||||| ||| Sbjct 3898 GCTCTGTACGAAATCGCCTCCATGCGTCTGTTTGCCCGGTTATC--CCTGGATAGCGC-- 3953 Query 9358 ACGTGCCGGACGCCACCACGCTGTTGAAATTCCGGCGCCTGCTGGTCGAGCACGCACTGA 9417 | |||||||| |||||| | |||| ||||| | |||||||| |||| |||| Sbjct 3954 -CTTGCCGGACCGCACCACCATCATGAATTTCCGCCACCTGCTGGAGCAGCATCAACTGG 4012 Query 9418 CGCGAAAGCTGTTCGACGAGATCGGCATCGA--GTTGTGCGAGCGCGGGC-TGATGATGA 9474 | || | ||||| | ||| |||| | || ||| || ||| | ||||||| Sbjct 4013 CCCGCCAATTGTTCAAGACCATCA--ATCGCTGGCTGGCCGAA-GCAGGCGTCATGATGA 4069 Query 9475 AGGAAGGCACGCTGGTGGATGCGACGATCTTCGAGGCTGCGCCGTCCACGAAGAACGCCG 9534 ||||||| |||| ||||| || ||| | ||||| | || || |||||| | Sbjct 4070 CTCAAGGCACCTTGGTCGATGCCACCATCATTGAGGCACCCAGCTCGACCAAGAACAAAG 4129 Query 9535 GGAAGAGCCGTGACCCGGAGATGCATCAGACGAAGAAGGGCAACGACTGGTATTTCGGCA 9594 | || || || ||||||||||||||||| ||||| ||||| | ||| | || |||| Sbjct 4130 AGCAGCAACGCGATCCGGAGATGCATCAGACCAAGAAAGGCAATCAGTGGCACTTTGGCA 4189 Query 9595 TGAAGGCCCATGTCGGCGTCGACGCCGACTCGGGTCTGGTGCATAGCGTGGTCACCACGG 9654 |||||||||| | || ||||| ||| | || ||| || ||| |||||||||| | Sbjct 4190 TGAAGGCCCACATTGGTGTCGATGCCAAGAGTGGCCTGACCCACAGCCTGGTCACCACCG 4249 Query 9655 CGGCCAACGAGC 9666 |||||||||||| Sbjct 4250 CGGCCAACGAGC 4261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119033366768540