Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08]
165 sequences; 9,358,797 total letters
Query= NC_015265.1
Length=37236
Score E
Sequences producing significant alignments: (Bits) Value
seq57 138 3e-28
>seq57
Length=4629
Score = 138 bits (152), Expect = 3e-28
Identities = 330/492 (67%), Gaps = 13/492 (3%)
Strand=Plus/Plus
Query 9180 GTGATCGGGCCGTATTACCCGAAGGGCGAGCGTGGCCGGCCGCCGATTGGCCTGGAACGG 9239
|| |||| ||||| |||||| |||| | |||||||| || | ||||||
Sbjct 3778 GTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGCTGGAAACC 3837
Query 9240 ATGCTGCGGATCTACTTGCTGCAGCAGTGGTACGGGTTGTCGGACGAAGGGCTTGAAGAT 9299
||||| || || ||| ||||||| |||||| || || | | | | ||||||
Sbjct 3838 ATGCTACGCATTCACTGCATGCAGCATTGGTACAACCTGAGCGATGGCGCGATGGAAGAT 3897
Query 9300 GCGCTCTACGACAGCATCGCGATGCGCGCCTTCGC--GGGCATCGACCTGGCGCGCGAGA 9357
|| || ||||| | | | | ||||| || || || ||| ||||| |||
Sbjct 3898 GCTCTGTACGAAATCGCCTCCATGCGTCTGTTTGCCCGGTTATC--CCTGGATAGCGC-- 3953
Query 9358 ACGTGCCGGACGCCACCACGCTGTTGAAATTCCGGCGCCTGCTGGTCGAGCACGCACTGA 9417
| |||||||| |||||| | |||| ||||| | |||||||| |||| ||||
Sbjct 3954 -CTTGCCGGACCGCACCACCATCATGAATTTCCGCCACCTGCTGGAGCAGCATCAACTGG 4012
Query 9418 CGCGAAAGCTGTTCGACGAGATCGGCATCGA--GTTGTGCGAGCGCGGGC-TGATGATGA 9474
| || | ||||| | ||| |||| | || ||| || ||| | |||||||
Sbjct 4013 CCCGCCAATTGTTCAAGACCATCA--ATCGCTGGCTGGCCGAA-GCAGGCGTCATGATGA 4069
Query 9475 AGGAAGGCACGCTGGTGGATGCGACGATCTTCGAGGCTGCGCCGTCCACGAAGAACGCCG 9534
||||||| |||| ||||| || ||| | ||||| | || || |||||| |
Sbjct 4070 CTCAAGGCACCTTGGTCGATGCCACCATCATTGAGGCACCCAGCTCGACCAAGAACAAAG 4129
Query 9535 GGAAGAGCCGTGACCCGGAGATGCATCAGACGAAGAAGGGCAACGACTGGTATTTCGGCA 9594
| || || || ||||||||||||||||| ||||| ||||| | ||| | || ||||
Sbjct 4130 AGCAGCAACGCGATCCGGAGATGCATCAGACCAAGAAAGGCAATCAGTGGCACTTTGGCA 4189
Query 9595 TGAAGGCCCATGTCGGCGTCGACGCCGACTCGGGTCTGGTGCATAGCGTGGTCACCACGG 9654
|||||||||| | || ||||| ||| | || ||| || ||| |||||||||| |
Sbjct 4190 TGAAGGCCCACATTGGTGTCGATGCCAAGAGTGGCCTGACCCACAGCCTGGTCACCACCG 4249
Query 9655 CGGCCAACGAGC 9666
||||||||||||
Sbjct 4250 CGGCCAACGAGC 4261
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 119033366768540
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |