Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08]
165 sequences; 9,358,797 total letters
Query= NC_017985.1
Length=40128
Score E
Sequences producing significant alignments: (Bits) Value
seq57 387 4e-103
>seq57
Length=4629
Score = 387 bits (428), Expect = 4e-103
Identities = 678/979 (69%), Gaps = 10/979 (1%)
Strand=Plus/Minus
Query 3104 TCCTTATTTTTACTGTGGGACATATTTGGGACAGAAGTACCAAAAATCGAGTCAATTTGT 3163
||| || ||| | ||||||||||||||||||| | ||||||||| ||| ||||
Sbjct 1146 TCCATAATTTCAGAGTGGGACATATTTGGGACATTATCACCAAAAATGTCGTCTATTTTC 1087
Query 3164 CGAGCATGTTCAGTCAGGTGATTTGGTGCCAGATGAGCATATCGGCGAACCATTTCGATA 3223
| ||||| || |||| ||||| || || || |||||||| | ||||||||||| ||
Sbjct 1086 CTCGCATGCTCTGTCAAATGATTAGGCGCAAGGTGAGCATACCTACGAACCATTTCTATG 1027
Query 3224 GACTCCCAGCCACCCATTTCCTGCAATACCGAAATCGGAACGCCAGCCTGAACTAACCAA 3283
|||||||| || ||||||||||| | || || | || ||||| | ||||| | |||
Sbjct 1026 GACTCCCATCCGCCCATTTCCTGAAGCACTGATAATGGGACGCCTGACTGAATCAGCCAG 967
Query 3284 CTTGCCCACGTGTGCCTCAGGTCATGAAAACGGAAGTCTTCAATGCCCGCTCGTTTTAAT 3343
|||||||| ||||| || |||||||| |||||||| |||||||| || || || |
Sbjct 966 CTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCAATTCCTGCACGACGACAA 907
Query 3344 GCTGCCCTCCATGCAGTATTAGCGTCATAGCGCATCTTCCTCACTACAGGTGATTTAGTT 3403
|||| ||||| || || ||| |||||||||||| || |||| | | |||
Sbjct 906 GCTGATAGCCATGATGTCTTGCTGTCGATGCGCATCTTCCTGACCGCAGGCGTTGATGTT 847
Query 3404 CCGTCTGGTTTGGT-GCTGCTTTCCT-TGTAGACGAACACCCATTTGTGATGATTGCCGA 3461
|| |||| | | || || || | |||| | ||||||||||||||||| ||||| |
Sbjct 846 CCATCTGCTCGCTTAGCCGCCTTGGTATGTACA--AACACCCATTTGTGATGCTTGCCTA 789
Query 3462 TTTGCTTTTTCAGCACCCGGCAAGCGGTATCATTCAGCGCCACTCCAATGGCATGATTAG 3521
|||| | || ||| || |||||||| ||||||||||| |||||||| | || |
Sbjct 788 TTTGATCACGCAACACTTTACAGGCGGTATCGTTCAGCGCCACACCAATGGCGCGGTTTG 729
Query 3522 ACTTGCTTTGTTCCGGGTGTATCCATGCCACCTTTCGTTGCATGTCTATCTGCTGCCACT 3581
| ||||| | ||| || | | ||| || || ||| |||||||| || || ||||| |
Sbjct 728 ATTTGCTCTCTTCTGGATTCACCCAGGCAACTCGTCGCTGCATGTCGATTTGTTGCCATT 669
Query 3582 CCAGATTGATAATGTTAGACCTCCTTAAGCCAGTAGAAAGCGCAAACTCTACGACTGACT 3641
||||||| || ||||| ||| | || | ||||| | |||||||||| ||||| || |
Sbjct 668 CCAGATTTATGATGTTCGACTTTCTCAGACCAGTTGCCAGCGCAAACTTGACGACAGATT 609
Query 3642 TTAGCGGTTCCTGGCATTCATCAATCAACCTTTTTGCCTCGTGAGGCTCAAGCCAGCGGA 3701
| || ||||| |||| |||||||| | | |||||| || | || ||||| | ||
Sbjct 608 TCAGTGGTTCGGGGCACTCATCAATAAGGCGTTTTGCTTCCTCCTTTTCCAGCCATCTGA 549
Query 3702 TACGCTTATTTTT--CGGCTGAGGAACTTTGATGATCGGAGCCTTATCCAGCATCTTCCA 3759
||||| ||| | | ||| || | ||||||| || || || |||||| ||||||
Sbjct 548 CTCGCTTGTTTCTGACCGCT--GGTATCTTGATGACAGGCGCTTTTTCCAGCCACTTCCA 491
Query 3760 TTCGCGTTCAGCAGCCCGGAGGAGTGCCTTAATGAATGAAAGGTGAGTTGCTTTTGTGGC 3819
|||||||| ||||| ||||| | ||||| || | | ||| || |||| |||||
Sbjct 490 GTCGCGTTCTGCAGCACGGAGAATGGCCTTTATCATGGCAAGATGCTTTGCCTTTGTCTG 431
Query 3820 TACTGCTGCCGGCTTAGGCTTGAATACTGGAGGCTGCTTCCCATTCTTCCTGCAAGCTTC 3879
|| | | ||||| || | | || || | | || || ||| | || || |
Sbjct 430 AGTTGATACTGGCTTTGGTTCATAAACAGGCAGTTCTTTACCTTTCCTGATGGCGGCCTG 371
Query 3880 ATCCATTAACTTCCAGTTTTCCTCATGCCGCCGATTAGTCA-TCTTCTGGATGGCGGAGT 3938
| | | ||||| |||| | | | ||| || ||| || | || ||||
Sbjct 370 AACTTTCTGTTTCCATATTTCTTTCGTCTTTCTGTTATGCATTCTGCT-TACAGCAGAGT 312
Query 3939 AAATCTTCGTCTCGGTAATATCCTTCAACTGCATCCCTGCAAAATGCTGGAGCCAGAATC 3998
||||||| | ||| | ||||| || | | || || ||||||| | ||||||||
Sbjct 311 AAATCTTTGCCTCCGAGATATCTTTAAGCCTTATACCCTCAAAATGTTCAAGCCAGAACT 252
Query 3999 CTATCCGACTCTTGTCATCATCCAGCGACTTCTTATGCGCCTTCTCCTCTAACCACCTGA 4058
| ||||| || || || ||| || || || |||| || || ||||| | ||| || |
Sbjct 251 CAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTA 192
Query 4059 CACAGGCCTCCTCAAAAGT 4077
|||||||| ||||||||
Sbjct 191 GGCAGGCCTCTTCAAAAGT 173
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 128287748635700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |