Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08]
165 sequences; 9,358,797 total letters
Query= NC_019705.1
Length=38759
Score E
Sequences producing significant alignments: (Bits) Value
seq57 136 1e-27
>seq57
Length=4629
Score = 136 bits (150), Expect = 1e-27
Identities = 227/328 (69%), Gaps = 0/328 (0%)
Strand=Plus/Minus
Query 20125 TATTTGTGCCATTGCGACTTATAATCGCATCGATTTTGCTCGCGTGCTCGGTGAGATGCC 20184
|||||| | |||| || | ||| | || ||||| ||||| ||||| || | |||
Sbjct 1124 TATTTGGGACATTATCACCAAAAATGTCGTCTATTTTCCTCGCATGCTCTGTCAAATGAT 1065
Query 20185 CGGCTGAAAGGTGGGCGTATCTTTGAACCATTTCGAGAGTTTCCCATCCTCCCATCTCTT 20244
| | |||||| || || || |||||||||| | | |||||||| ||||| || |
Sbjct 1064 TAGGCGCAAGGTGAGCATACCTACGAACCATTTCTATGGACTCCCATCCGCCCATTTCCT 1005
Query 20245 TAAGTGCAAGAAGAGAGACACCGGACTGAACCAGCCAGCTTGCCCAAGTATGCCTCAGGT 20304
||| | | | ||| || ||||||| ||||||||||||||| || || || ||||
Sbjct 1004 GAAGCACTGATAATGGGACGCCTGACTGAATCAGCCAGCTTGCCCAGGTGTGTCTGAGGT 945
Query 20305 CATGGAAGCGGAAGTTGCTAATGCCTGCCCGCTTTAACGCTCCCTTCCATGCCTTGTTGC 20364
||||||| ||||| | ||| ||||| || | ||| ||||| | ||||
Sbjct 944 CATGGAAACGGAAATCTTCAATTCCTGCACGACGACAAGCTGATAGCCATGATGTCTTGC 885
Query 20365 TGTCGGTTCTCATCTTCCTTACCGCTGCTGTTTTTGTTCCGTCGCTTCGGTAGGCAGGTT 20424
||||| | | ||||||||| ||||| | ||| |||||| || ||| | || | |
Sbjct 884 TGTCGATGCGCATCTTCCTGACCGCAGGCGTTGATGTTCCATCTGCTCGCTTAGCCGCCT 825
Query 20425 TGGTGTGGACAAACACCCATCTCTTATG 20452
|||| || |||||||||||| | | |||
Sbjct 824 TGGTATGTACAAACACCCATTTGTGATG 797
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 123906957219330
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |