Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08] 165 sequences; 9,358,797 total letters Query= NC_019927.1 Length=47611 Score E Sequences producing significant alignments: (Bits) Value seq57 356 7e-94 >seq57 Length=4629 Score = 356 bits (394), Expect = 7e-94 Identities = 509/712 (71%), Gaps = 12/712 (2%) Strand=Plus/Minus Query 7560 TTTCCGTGTGGGACAAATTTGGGACGCAATCTCCAAAAATTGAGTCTATTTGCTTCGCGT 7619 |||| | |||||||| ||||||||| ||| |||||||| |||||||| | |||| | Sbjct 1139 TTTCAGAGTGGGACATATTTGGGACATTATCACCAAAAATGTCGTCTATTTTCCTCGCAT 1080 Query 7620 GCTCGGTCAGGTGATTAGGTGCCAGATGTGCATAACGGCGGACCATTTCTATTGACTCCC 7679 |||| |||| |||||||| || || || ||||| | || ||||||||||| ||||||| Sbjct 1079 GCTCTGTCAAATGATTAGGCGCAAGGTGAGCATACCTACGAACCATTTCTATGGACTCCC 1020 Query 7680 ATCCTCCCATCTCCTGAAGAACCGAAATCGGGACGCCCGCCTGAACTAACCAGCTTGCCC 7739 |||| ||||| |||||||| || || | |||||||| | ||||| | ||||||||||| Sbjct 1019 ATCCGCCCATTTCCTGAAGCACTGATAATGGGACGCCTGACTGAATCAGCCAGCTTGCCC 960 Query 7740 AAGTGTGTCTCAGGTCATGGAAGCGGAAATCCTCAATGCCAGCACGTTTAAGCGCAGCCC 7799 | |||||||| ||||||||||| |||||||| ||||| || ||||| | || | Sbjct 959 AGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCAATTCCTGCACGACGACAAGCTGATA 900 Query 7800 TCCACGCCGTGTTTGCGTCGTAACGCATTTTCCTCACTGTCGGAACTTTG--GTTCCATC 7857 ||| | || || |||| ||||| ||||| || | || | ||| |||||||| Sbjct 899 GCCATGATGTCTTGCTGTCGATGCGCATCTTCCTGACCGCAGG--CGTTGATGTTCCATC 842 Query 7858 TGGCCGGGT-GCAGCTTTCCT-TGTAGACAAAAACCCACTTGTGGTGATTGCCTATTTGC 7915 || || | || || || | ||| ||||| ||||| ||||| || ||||||||||| Sbjct 841 TGCTCGCTTAGCCGCCTTGGTATGT--ACAAACACCCATTTGTGATGCTTGCCTATTTGA 784 Query 7916 CTTTTCAGCACACGACATGCAGTATCATTCAGCGCCACGCCAATGGCCTGATTTNNNNNN 7975 || ||| ||| || ||||| ||||||||||| |||||||| | ||| Sbjct 783 TCACGCAACACTTTACAGGCGGTATCGTTCAGCGCCACACCAATGGCGCGGTTTGATTTG 724 Query 7976 NNNNNNNCCGGGTGTATCCACGCCACCCGGCGCTGCATGTCTATCTGCTGCCATTCAAGA 8035 | || | | ||| || || || ||||||||||| || || |||||||| ||| Sbjct 723 CTCTCTTCTGGATTCACCCAGGCAACTCGTCGCTGCATGTCGATTTGTTGCCATTCCAGA 664 Query 8036 TTGATGATGTTCGACCGCCGTAGCCCCGTCGCCAGCGCAAACTCGACAACGGACTTAAGC 8095 || |||||||||||| | || || || ||||||||||||| ||| || || || || Sbjct 663 TTTATGATGTTCGACTTTCTCAGACCAGTTGCCAGCGCAAACTTGACGACAGATTTCAGT 604 Query 8096 GGGTCTGGGCATTCATCAATCAGCCTTTTCGCCTCATGAGGCTCCAGCCATCGAATGCGT 8155 || || ||||| |||||||| || | ||| || || | |||||||||| | || Sbjct 603 GGTTCGGGGCACTCATCAATAAGGCGTTTTGCTTCCTCCTTTTCCAGCCATCTGACTCGC 544 Query 8156 TTG-TTCT-TCGGCTGAGGCACCTTCACAATCGGCGCTTTGTCCAGCATCTTCCATTCAC 8213 ||| |||| | ||| || | ||| | | |||||||| |||||| |||||| || | Sbjct 543 TTGTTTCTGACCGCT--GGTATCTTGATGACAGGCGCTTTTTCCAGCCACTTCCAGTCGC 486 Query 8214 GCTCAGCGGCGCGTAACAACGCTTTGATGAAGGAAAGGTGAGTGGCCTTTGT 8265 | || || || || | | || || || | || ||| || | |||||||| Sbjct 485 GTTCTGCAGCACGGAGAATGGCCTTTATCATGGCAAGATGCTTTGCCTTTGT 434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152233301717290