Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08]
165 sequences; 9,358,797 total letters
Query= NC_019927.1
Length=47611
Score E
Sequences producing significant alignments: (Bits) Value
seq57 356 7e-94
>seq57
Length=4629
Score = 356 bits (394), Expect = 7e-94
Identities = 509/712 (71%), Gaps = 12/712 (2%)
Strand=Plus/Minus
Query 7560 TTTCCGTGTGGGACAAATTTGGGACGCAATCTCCAAAAATTGAGTCTATTTGCTTCGCGT 7619
|||| | |||||||| ||||||||| ||| |||||||| |||||||| | |||| |
Sbjct 1139 TTTCAGAGTGGGACATATTTGGGACATTATCACCAAAAATGTCGTCTATTTTCCTCGCAT 1080
Query 7620 GCTCGGTCAGGTGATTAGGTGCCAGATGTGCATAACGGCGGACCATTTCTATTGACTCCC 7679
|||| |||| |||||||| || || || ||||| | || ||||||||||| |||||||
Sbjct 1079 GCTCTGTCAAATGATTAGGCGCAAGGTGAGCATACCTACGAACCATTTCTATGGACTCCC 1020
Query 7680 ATCCTCCCATCTCCTGAAGAACCGAAATCGGGACGCCCGCCTGAACTAACCAGCTTGCCC 7739
|||| ||||| |||||||| || || | |||||||| | ||||| | |||||||||||
Sbjct 1019 ATCCGCCCATTTCCTGAAGCACTGATAATGGGACGCCTGACTGAATCAGCCAGCTTGCCC 960
Query 7740 AAGTGTGTCTCAGGTCATGGAAGCGGAAATCCTCAATGCCAGCACGTTTAAGCGCAGCCC 7799
| |||||||| ||||||||||| |||||||| ||||| || ||||| | || |
Sbjct 959 AGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCAATTCCTGCACGACGACAAGCTGATA 900
Query 7800 TCCACGCCGTGTTTGCGTCGTAACGCATTTTCCTCACTGTCGGAACTTTG--GTTCCATC 7857
||| | || || |||| ||||| ||||| || | || | ||| ||||||||
Sbjct 899 GCCATGATGTCTTGCTGTCGATGCGCATCTTCCTGACCGCAGG--CGTTGATGTTCCATC 842
Query 7858 TGGCCGGGT-GCAGCTTTCCT-TGTAGACAAAAACCCACTTGTGGTGATTGCCTATTTGC 7915
|| || | || || || | ||| ||||| ||||| ||||| || |||||||||||
Sbjct 841 TGCTCGCTTAGCCGCCTTGGTATGT--ACAAACACCCATTTGTGATGCTTGCCTATTTGA 784
Query 7916 CTTTTCAGCACACGACATGCAGTATCATTCAGCGCCACGCCAATGGCCTGATTTNNNNNN 7975
|| ||| ||| || ||||| ||||||||||| |||||||| | |||
Sbjct 783 TCACGCAACACTTTACAGGCGGTATCGTTCAGCGCCACACCAATGGCGCGGTTTGATTTG 724
Query 7976 NNNNNNNCCGGGTGTATCCACGCCACCCGGCGCTGCATGTCTATCTGCTGCCATTCAAGA 8035
| || | | ||| || || || ||||||||||| || || |||||||| |||
Sbjct 723 CTCTCTTCTGGATTCACCCAGGCAACTCGTCGCTGCATGTCGATTTGTTGCCATTCCAGA 664
Query 8036 TTGATGATGTTCGACCGCCGTAGCCCCGTCGCCAGCGCAAACTCGACAACGGACTTAAGC 8095
|| |||||||||||| | || || || ||||||||||||| ||| || || || ||
Sbjct 663 TTTATGATGTTCGACTTTCTCAGACCAGTTGCCAGCGCAAACTTGACGACAGATTTCAGT 604
Query 8096 GGGTCTGGGCATTCATCAATCAGCCTTTTCGCCTCATGAGGCTCCAGCCATCGAATGCGT 8155
|| || ||||| |||||||| || | ||| || || | |||||||||| | ||
Sbjct 603 GGTTCGGGGCACTCATCAATAAGGCGTTTTGCTTCCTCCTTTTCCAGCCATCTGACTCGC 544
Query 8156 TTG-TTCT-TCGGCTGAGGCACCTTCACAATCGGCGCTTTGTCCAGCATCTTCCATTCAC 8213
||| |||| | ||| || | ||| | | |||||||| |||||| |||||| || |
Sbjct 543 TTGTTTCTGACCGCT--GGTATCTTGATGACAGGCGCTTTTTCCAGCCACTTCCAGTCGC 486
Query 8214 GCTCAGCGGCGCGTAACAACGCTTTGATGAAGGAAAGGTGAGTGGCCTTTGT 8265
| || || || || | | || || || | || ||| || | ||||||||
Sbjct 485 GTTCTGCAGCACGGAGAATGGCCTTTATCATGGCAAGATGCTTTGCCTTTGT 434
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 152233301717290
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |