Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08]
165 sequences; 9,358,797 total letters
Query= NC_021857.1
Length=41475
Score E
Sequences producing significant alignments: (Bits) Value
seq57 401 2e-107
>seq57
Length=4629
Score = 401 bits (444), Expect = 2e-107
Identities = 732/1060 (69%), Gaps = 19/1060 (2%)
Strand=Plus/Minus
Query 24849 GGTCGTAGGTTCGACTCCTATTATCGGCACCATTTAAAT-CAATAAGTTACACATCATTA 24907
|| || |||||||| |||| || ||||| ||| |||| |||||| | | ||
Sbjct 1212 GGCCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTT 1153
Query 24908 GTACCTTCCTTATTTTTTGACTGGGACAAATTTGGGACCGATGGGTTC--AGGATCGAGT 24965
|| | ||| || ||| || ||||||| ||||||||| || | | || ||
Sbjct 1152 ATATCCTCCATAATTTCAGAGTGGGACATATTTGGGAC--ATTATCACCAAAAATGTCGT 1095
Query 24966 CTATTTGCCGTGCATGTTCGGTAAGGTGATTAGGTGCGAGGTGAGCATATCGACGAACCA 25025
|||||| || ||||| || || | |||||||| || ||||||||||| | ||||||||
Sbjct 1094 CTATTTTCCTCGCATGCTCTGTCAAATGATTAGGCGCAAGGTGAGCATACCTACGAACCA 1035
Query 25026 TTTCGATAGACTCCCAGCCTCCCATTTCCTGTAACACTGACAACGGGACTCCGGCTTGAA 25085
|||| || |||||||| || ||||||||||| | |||||| || ||||| || | ||||
Sbjct 1034 TTTCTATGGACTCCCATCCGCCCATTTCCTGAAGCACTGATAATGGGACGCCTGACTGAA 975
Query 25086 CCAGCCAACTTGCCCAGGTGTGTCTCAAGTCGTGAAATCTGAAATCATCAATACCTGCTC 25145
|||||| ||||||||||||||||| | ||| || || | |||||| ||||| ||||| |
Sbjct 974 TCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCAATTCCTGCAC 915
Query 25146 GTCTCAGCGCCGCTTTCCAGGCTGTGTTTGCGTCATACCGCATCTTCCTGACCGTTGGCG 25205
| | || | | ||| | ||| || ||| |||||||||||||||| ||||
Sbjct 914 GACGACAAGCTGATAGCCATGATGTCTTGCTGTCGATGCGCATCTTCCTGACCGCAGGCG 855
Query 25206 CTTTCGTTCCGTCTGGTTTGGTA-CAGCTTTCCT-TGTAAACAAATACCCAACGGTGATG 25263
| ||||| |||| | || | || || | |||| |||| ||||| ||||||
Sbjct 854 TTGATGTTCCATCTGCTCGCTTAGCCGCCTTGGTATGTA--CAAACACCCATTTGTGATG 797
Query 25264 ATTCCCGATTTGTTTTTTCAATACGCGACATGCAGTATCATTCAGCGCAACGCCAATTGC 25323
|| || ||||| | ||| || ||| || ||||| |||||||| || ||||| ||
Sbjct 796 CTTGCCTATTTGATCACGCAACACTTTACAGGCGGTATCGTTCAGCGCCACACCAATGGC 737
Query 25324 GCGGTTTGATTTACTCTCTTCCGGGTTTATCCATGCCACCCGGCGCTGCATATCTATTTG 25383
|||||||||||| |||||||| || || | ||| || || || |||||||| || |||||
Sbjct 736 GCGGTTTGATTTGCTCTCTTCTGGATTCACCCAGGCAACTCGTCGCTGCATGTCGATTTG 677
Query 25384 TTGCCATTCAAGGTTGATGATGTTCGAGCGTCTTAAGCCTGTTGCCAGTGCAAATTCAAC 25443
||||||||| || || ||||||||||| ||| | || |||||||| ||||| | ||
Sbjct 676 TTGCCATTCCAGATTTATGATGTTCGACTTTCTCAGACCAGTTGCCAGCGCAAACTTGAC 617
Query 25444 AACAGACTTTAATGGCTCCGGACATTCATCAATCAGCCTTTGTGCTTCATGGGGCTCCAG 25503
||||| || | ||| || || || |||||||| || | || |||||| | |||||
Sbjct 616 GACAGATTTCAGTGGTTCGGGGCACTCATCAATAAGGCGTTTTGCTTCCTCCTTTTCCAG 557
Query 25504 CCAGCGGATCCGTTTATTCTTTGGTTG-AGGCACTTTAATAATTGGTGCCTTATCCAGCA 25562
||| | || || || || | || | || | || || | || || || ||||||
Sbjct 556 CCATCTGACTCGCTTGTT-TCTGACCGCTGGTATCTTGATGACAGGCGCTTTTTCCAGCC 498
Query 25563 TTTTCCATTCACGCTCTGCGGCTCTTAGTAGGGCCTTTATAAATGAAAGATGCGTAGCCT 25622
||||| || || ||||| || | || | ||||||||| | | ||||||| | ||||
Sbjct 497 ACTTCCAGTCGCGTTCTGCAGCACGGAGAATGGCCTTTATCATGGCAAGATGCTTTGCCT 438
Query 25623 TCGTTGCAACGGACGCTGGTTTTGGCGTGTATTCTGGAACAGGTTTCCCtttttttCTGC 25682
| || | || |||| ||||| || | || | ||| ||||| | ||
Sbjct 437 TTGTCTGAGTTGATACTGGCTTTGGTTCATAAACAGGCAGTTCTTTACCTTTCCTGATGG 378
Query 25683 ATGCTTCTGCCCTGAGTTTCCAGTTTTCCTCATGACGCCGGTTCGTCAT--TTTCTGC-- 25738
|| | | | ||||||| |||| | || | | || || ||||||
Sbjct 377 CGGCCTGAACTTTCTGTTTCCATATTTC----TTTCGTCTTTCTGTTATGCATTCTGCTT 322
Query 25739 ATTGCTGAATAAATTTTTGATTCAGTGATGTCTCTTAGTTGCATCCCTGCGAAATGTTGA 25798
| || || ||||| |||| || | ||| ||| | || || || | ||||||| |
Sbjct 321 ACAGCAGAGTAAATCTTTGCCTCCGAGATATCTTTAAGCCTTATACCCTCAAAATGTTCA 262
Query 25799 AGCCAGAATCCGATCCGGCTTTTGTCATCGTCCAGTGATTTCTTATGTGCTTTCTCTTCG 25858
|||||||| | ||||||||||| || || || ||||| |||| ||||| || ||
Sbjct 261 AGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCA 202
Query 25859 AGCCACCTGACACACGCTTCCTCAAACGTCATATCAGGTA 25898
||||| || | || || || ||||| || | ||||||||
Sbjct 201 AGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTA 162
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 132598140190010
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |