Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08]
165 sequences; 9,358,797 total letters
Query= NC_022749.1
Length=39758
Score E
Sequences producing significant alignments: (Bits) Value
seq57 387 3e-103
>seq57
Length=4629
Score = 387 bits (428), Expect = 3e-103
Identities = 729/1060 (69%), Gaps = 19/1060 (2%)
Strand=Plus/Minus
Query 23212 GGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAAT-CAATAAGTTACACATCATTA 23270
|| || |||||||| |||| || |||||| ||| |||| |||||| | | ||
Sbjct 1212 GGCCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTT 1153
Query 23271 GTACCTTCCTTATTTTTTGACTGGGACAAATTTGGGACCGATGGGTTC--AGGATCGAGT 23328
|| | ||| || ||| || ||||||| ||||||||| || | | || ||
Sbjct 1152 ATATCCTCCATAATTTCAGAGTGGGACATATTTGGGAC--ATTATCACCAAAAATGTCGT 1095
Query 23329 CTATTTGCCGTGCGTGTTCGGTAAGGTGATTAGGTGCAAGGTGAGCATATCGACGAACCA 23388
|||||| || || || || || | |||||||| |||||||||||||| | ||||||||
Sbjct 1094 CTATTTTCCTCGCATGCTCTGTCAAATGATTAGGCGCAAGGTGAGCATACCTACGAACCA 1035
Query 23389 TTTCGATAGACTCCCAGCCTCCCATTTCCTGTAAAACTGACAACGGGACTCCGGCTTGAA 23448
|||| || |||||||| || ||||||||||| | ||||| || ||||| || | ||||
Sbjct 1034 TTTCTATGGACTCCCATCCGCCCATTTCCTGAAGCACTGATAATGGGACGCCTGACTGAA 975
Query 23449 CCAGCCAACTTGCCCAGGTGTGTCTCAAGTCGTGAAATCTGAAATCATCAATACCAGCCC 23508
|||||| ||||||||||||||||| | ||| || || | |||||| ||||| || || |
Sbjct 974 TCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCAATTCCTGCAC 915
Query 23509 GTCTCAGCGCCGCTTTCCAGGCTGTGTTTGCGTCATACCGCATCTTCCTTACTGTTGGCG 23568
| | || | | ||| | ||| || ||| ||||||||||| || | ||||
Sbjct 914 GACGACAAGCTGATAGCCATGATGTCTTGCTGTCGATGCGCATCTTCCTGACCGCAGGCG 855
Query 23569 CTTTCGTTCCGTCTGGTTTGGTA-CAGCTTTCCT-TGTACACAAATACCCAACGGTGATG 23626
| ||||| |||| | || | || || | |||||| || ||||| ||||||
Sbjct 854 TTGATGTTCCATCTGCTCGCTTAGCCGCCTTGGTATGTACA--AACACCCATTTGTGATG 797
Query 23627 ATTCCCGATTTGTTTTTTCAATACGCGACATGCAGTATCATTCAGCGCAACGCCAATTGC 23686
|| || ||||| | ||| || ||| || ||||| |||||||| || ||||| ||
Sbjct 796 CTTGCCTATTTGATCACGCAACACTTTACAGGCGGTATCGTTCAGCGCCACACCAATGGC 737
Query 23687 GCGGTTTGATTTACTCTCTTCCGGGTTTATCCATGCCACCCGGCGCTGCATATCTATTTG 23746
|||||||||||| |||||||| || || | ||| || || || |||||||| || |||||
Sbjct 736 GCGGTTTGATTTGCTCTCTTCTGGATTCACCCAGGCAACTCGTCGCTGCATGTCGATTTG 677
Query 23747 TTGCCATTCAAGGTTGATGATGTTCGAGCGTCTTAAGCCTGTTGCCAGTGCAAATTCAAC 23806
||||||||| || || ||||||||||| ||| | || |||||||| ||||| | ||
Sbjct 676 TTGCCATTCCAGATTTATGATGTTCGACTTTCTCAGACCAGTTGCCAGCGCAAACTTGAC 617
Query 23807 AACAGACTTTAATGGCTCCGGACATTCATCAATCAGCCTTTGTGCTTCATGGGGCTCCAG 23866
||||| || | ||| || || || |||||||| || | || |||||| | |||||
Sbjct 616 GACAGATTTCAGTGGTTCGGGGCACTCATCAATAAGGCGTTTTGCTTCCTCCTTTTCCAG 557
Query 23867 CCAGCGGATCCGTTTATTCTTTGGTTG-AGGCACTTTAATAATTGGTGCCTTATCCAGCA 23925
||| | || || || || | || | || | || || | || || || ||||||
Sbjct 556 CCATCTGACTCGCTTGTT-TCTGACCGCTGGTATCTTGATGACAGGCGCTTTTTCCAGCC 498
Query 23926 TTTTCCATTCACGCTCTGCGGCTCTTAGTAGGGCCTTTATAAATGAAAGATGCGTAGCCT 23985
||||| || || ||||| || | || | ||||||||| | | ||||||| | ||||
Sbjct 497 ACTTCCAGTCGCGTTCTGCAGCACGGAGAATGGCCTTTATCATGGCAAGATGCTTTGCCT 438
Query 23986 TCGTTGCAACGGACGCTGGTTTTGGCGTGTATTCTGGAACAGGTTTCCCtttttttCTGC 24045
| || | || |||| ||||| || | || | ||| ||||| | ||
Sbjct 437 TTGTCTGAGTTGATACTGGCTTTGGTTCATAAACAGGCAGTTCTTTACCTTTCCTGATGG 378
Query 24046 ATGCTTCTGCCCTGAGTTTCCAGTTTTCCTCATGACGCCGGTTCGTCAT--TTTCTGC-- 24101
|| | | | ||||||| |||| | || | | || || ||||||
Sbjct 377 CGGCCTGAACTTTCTGTTTCCATATTTC----TTTCGTCTTTCTGTTATGCATTCTGCTT 322
Query 24102 ATTGCTGAATAAATTTTTGATTCAGTAATGTCTCTTAGTTGCATTCCTGCGAAATGTTGA 24161
| || || ||||| |||| || | || ||| | || || || | ||||||| |
Sbjct 321 ACAGCAGAGTAAATCTTTGCCTCCGAGATATCTTTAAGCCTTATACCCTCAAAATGTTCA 262
Query 24162 AGCCAGAATCCGATCCGGCTTTTGTCATCGTCCAGTGATTTTTTATGTGCTTTCTCTTCA 24221
|||||||| | ||||||||||| || || || |||||||||| ||||| || |||
Sbjct 261 AGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCA 202
Query 24222 AGCCACCTGACACACGCTTCCTCGAACGTTATATCAGGTA 24261
||||| || | || || || || || || | ||||||||
Sbjct 201 AGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTA 162
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127103750955600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |