Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08] 165 sequences; 9,358,797 total letters Query= NC_022749.1 Length=39758 Score E Sequences producing significant alignments: (Bits) Value seq57 387 3e-103 >seq57 Length=4629 Score = 387 bits (428), Expect = 3e-103 Identities = 729/1060 (69%), Gaps = 19/1060 (2%) Strand=Plus/Minus Query 23212 GGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAAT-CAATAAGTTACACATCATTA 23270 || || |||||||| |||| || |||||| ||| |||| |||||| | | || Sbjct 1212 GGCCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTT 1153 Query 23271 GTACCTTCCTTATTTTTTGACTGGGACAAATTTGGGACCGATGGGTTC--AGGATCGAGT 23328 || | ||| || ||| || ||||||| ||||||||| || | | || || Sbjct 1152 ATATCCTCCATAATTTCAGAGTGGGACATATTTGGGAC--ATTATCACCAAAAATGTCGT 1095 Query 23329 CTATTTGCCGTGCGTGTTCGGTAAGGTGATTAGGTGCAAGGTGAGCATATCGACGAACCA 23388 |||||| || || || || || | |||||||| |||||||||||||| | |||||||| Sbjct 1094 CTATTTTCCTCGCATGCTCTGTCAAATGATTAGGCGCAAGGTGAGCATACCTACGAACCA 1035 Query 23389 TTTCGATAGACTCCCAGCCTCCCATTTCCTGTAAAACTGACAACGGGACTCCGGCTTGAA 23448 |||| || |||||||| || ||||||||||| | ||||| || ||||| || | |||| Sbjct 1034 TTTCTATGGACTCCCATCCGCCCATTTCCTGAAGCACTGATAATGGGACGCCTGACTGAA 975 Query 23449 CCAGCCAACTTGCCCAGGTGTGTCTCAAGTCGTGAAATCTGAAATCATCAATACCAGCCC 23508 |||||| ||||||||||||||||| | ||| || || | |||||| ||||| || || | Sbjct 974 TCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCAATTCCTGCAC 915 Query 23509 GTCTCAGCGCCGCTTTCCAGGCTGTGTTTGCGTCATACCGCATCTTCCTTACTGTTGGCG 23568 | | || | | ||| | ||| || ||| ||||||||||| || | |||| Sbjct 914 GACGACAAGCTGATAGCCATGATGTCTTGCTGTCGATGCGCATCTTCCTGACCGCAGGCG 855 Query 23569 CTTTCGTTCCGTCTGGTTTGGTA-CAGCTTTCCT-TGTACACAAATACCCAACGGTGATG 23626 | ||||| |||| | || | || || | |||||| || ||||| |||||| Sbjct 854 TTGATGTTCCATCTGCTCGCTTAGCCGCCTTGGTATGTACA--AACACCCATTTGTGATG 797 Query 23627 ATTCCCGATTTGTTTTTTCAATACGCGACATGCAGTATCATTCAGCGCAACGCCAATTGC 23686 || || ||||| | ||| || ||| || ||||| |||||||| || ||||| || Sbjct 796 CTTGCCTATTTGATCACGCAACACTTTACAGGCGGTATCGTTCAGCGCCACACCAATGGC 737 Query 23687 GCGGTTTGATTTACTCTCTTCCGGGTTTATCCATGCCACCCGGCGCTGCATATCTATTTG 23746 |||||||||||| |||||||| || || | ||| || || || |||||||| || ||||| Sbjct 736 GCGGTTTGATTTGCTCTCTTCTGGATTCACCCAGGCAACTCGTCGCTGCATGTCGATTTG 677 Query 23747 TTGCCATTCAAGGTTGATGATGTTCGAGCGTCTTAAGCCTGTTGCCAGTGCAAATTCAAC 23806 ||||||||| || || ||||||||||| ||| | || |||||||| ||||| | || Sbjct 676 TTGCCATTCCAGATTTATGATGTTCGACTTTCTCAGACCAGTTGCCAGCGCAAACTTGAC 617 Query 23807 AACAGACTTTAATGGCTCCGGACATTCATCAATCAGCCTTTGTGCTTCATGGGGCTCCAG 23866 ||||| || | ||| || || || |||||||| || | || |||||| | ||||| Sbjct 616 GACAGATTTCAGTGGTTCGGGGCACTCATCAATAAGGCGTTTTGCTTCCTCCTTTTCCAG 557 Query 23867 CCAGCGGATCCGTTTATTCTTTGGTTG-AGGCACTTTAATAATTGGTGCCTTATCCAGCA 23925 ||| | || || || || | || | || | || || | || || || |||||| Sbjct 556 CCATCTGACTCGCTTGTT-TCTGACCGCTGGTATCTTGATGACAGGCGCTTTTTCCAGCC 498 Query 23926 TTTTCCATTCACGCTCTGCGGCTCTTAGTAGGGCCTTTATAAATGAAAGATGCGTAGCCT 23985 ||||| || || ||||| || | || | ||||||||| | | ||||||| | |||| Sbjct 497 ACTTCCAGTCGCGTTCTGCAGCACGGAGAATGGCCTTTATCATGGCAAGATGCTTTGCCT 438 Query 23986 TCGTTGCAACGGACGCTGGTTTTGGCGTGTATTCTGGAACAGGTTTCCCtttttttCTGC 24045 | || | || |||| ||||| || | || | ||| ||||| | || Sbjct 437 TTGTCTGAGTTGATACTGGCTTTGGTTCATAAACAGGCAGTTCTTTACCTTTCCTGATGG 378 Query 24046 ATGCTTCTGCCCTGAGTTTCCAGTTTTCCTCATGACGCCGGTTCGTCAT--TTTCTGC-- 24101 || | | | ||||||| |||| | || | | || || |||||| Sbjct 377 CGGCCTGAACTTTCTGTTTCCATATTTC----TTTCGTCTTTCTGTTATGCATTCTGCTT 322 Query 24102 ATTGCTGAATAAATTTTTGATTCAGTAATGTCTCTTAGTTGCATTCCTGCGAAATGTTGA 24161 | || || ||||| |||| || | || ||| | || || || | ||||||| | Sbjct 321 ACAGCAGAGTAAATCTTTGCCTCCGAGATATCTTTAAGCCTTATACCCTCAAAATGTTCA 262 Query 24162 AGCCAGAATCCGATCCGGCTTTTGTCATCGTCCAGTGATTTTTTATGTGCTTTCTCTTCA 24221 |||||||| | ||||||||||| || || || |||||||||| ||||| || ||| Sbjct 261 AGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCA 202 Query 24222 AGCCACCTGACACACGCTTCCTCGAACGTTATATCAGGTA 24261 ||||| || | || || || || || || | |||||||| Sbjct 201 AGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTA 162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127103750955600