Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08]
165 sequences; 9,358,797 total letters
Query= NC_025115.1
Length=40002
Score E
Sequences producing significant alignments: (Bits) Value
seq57 136 1e-27
>seq57
Length=4629
Score = 136 bits (150), Expect = 1e-27
Identities = 271/389 (70%), Gaps = 12/389 (3%)
Strand=Plus/Minus
Query 18142 GCATCCACGCCAATGTGCGCTTTCATTCCGAAATGCCACTGGTTACCTTTCTTGGTCTGG 18201
||||| || |||||||| || ||||| || || |||||||| || ||||||||||||||
Sbjct 4214 GCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGA 4155
Query 18202 TGCATCTCGGGGTCGCGCTTGCCGCT-GCCATTCTTGGTCGAGCTGGGCGCGGCAATCAG 18260
|||||||| || ||||| |||| ||| ||||||||||||||||| || |||| |
Sbjct 4154 TGCATCTCCGGATCGCG-TTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGAT 4096
Query 18261 CGAGGCGTCGACCACCGTGCCCTCTTTGAGCAGGTAGCC--CTTCGCACTGAGTTGCGCG 18318
| ||| ||||||| ||||| | | | || | ||| ||||| | | |||
Sbjct 4095 GGTGGCATCGACCAAGGTGCCTTGAGTCATCATGACGCCTGCTTCGGCCAG-CCAGCG-A 4038
Query 18319 TTGACCGTCTGCAGAAATTGCTCGGCCAGTTGGTGTCGCTCCAGCAAGTGCCGAAAGCGC 18378
|||| |||| | ||||| ||||||||| || ||||||||| ||| || || |
Sbjct 4037 TTGATGGTCTTGAACAATTGGCGGGCCAGTTGATGCTGCTCCAGCAGGTGGCGGAAATTC 3978
Query 18379 AGAATGCTGACCCGGTCCGGCAGTCGGCTTATGC-CTCCCAGCCCCGCGAATTGCCG-AT 18436
| ||| || |||||||||| || ||| | | || || || | || ||
Sbjct 3977 ATGATGGTGGTGCGGTCCGGCAAGGCGC-TATCCAGGGATAACCGGGCAAACAGACGCAT 3919
Query 18437 ACAACGGC-ACGTCGTACAGCGCCTCTTCCATCGCCACGTCCGTCAGCCCGAACCATTGC 18495
| ||| | |||||||| || ||||||||||| | || |||| | |||| |||
Sbjct 3918 GGA--GGCGATTTCGTACAGAGCATCTTCCATCGCGCCATCGCTCAGGTTGTACCAATGC 3861
Query 18496 TGCAGAAAGTGGATGCGCAGCATCGTTTC 18524
|||| |||| ||||| ||||| |||||
Sbjct 3860 TGCATGCAGTGAATGCGTAGCATGGTTTC 3832
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127884549425720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |