Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08] 165 sequences; 9,358,797 total letters Query= NC_025115.1 Length=40002 Score E Sequences producing significant alignments: (Bits) Value seq57 136 1e-27 >seq57 Length=4629 Score = 136 bits (150), Expect = 1e-27 Identities = 271/389 (70%), Gaps = 12/389 (3%) Strand=Plus/Minus Query 18142 GCATCCACGCCAATGTGCGCTTTCATTCCGAAATGCCACTGGTTACCTTTCTTGGTCTGG 18201 ||||| || |||||||| || ||||| || || |||||||| || |||||||||||||| Sbjct 4214 GCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGA 4155 Query 18202 TGCATCTCGGGGTCGCGCTTGCCGCT-GCCATTCTTGGTCGAGCTGGGCGCGGCAATCAG 18260 |||||||| || ||||| |||| ||| ||||||||||||||||| || |||| | Sbjct 4154 TGCATCTCCGGATCGCG-TTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGAT 4096 Query 18261 CGAGGCGTCGACCACCGTGCCCTCTTTGAGCAGGTAGCC--CTTCGCACTGAGTTGCGCG 18318 | ||| ||||||| ||||| | | | || | ||| ||||| | | ||| Sbjct 4095 GGTGGCATCGACCAAGGTGCCTTGAGTCATCATGACGCCTGCTTCGGCCAG-CCAGCG-A 4038 Query 18319 TTGACCGTCTGCAGAAATTGCTCGGCCAGTTGGTGTCGCTCCAGCAAGTGCCGAAAGCGC 18378 |||| |||| | ||||| ||||||||| || ||||||||| ||| || || | Sbjct 4037 TTGATGGTCTTGAACAATTGGCGGGCCAGTTGATGCTGCTCCAGCAGGTGGCGGAAATTC 3978 Query 18379 AGAATGCTGACCCGGTCCGGCAGTCGGCTTATGC-CTCCCAGCCCCGCGAATTGCCG-AT 18436 | ||| || |||||||||| || ||| | | || || || | || || Sbjct 3977 ATGATGGTGGTGCGGTCCGGCAAGGCGC-TATCCAGGGATAACCGGGCAAACAGACGCAT 3919 Query 18437 ACAACGGC-ACGTCGTACAGCGCCTCTTCCATCGCCACGTCCGTCAGCCCGAACCATTGC 18495 | ||| | |||||||| || ||||||||||| | || |||| | |||| ||| Sbjct 3918 GGA--GGCGATTTCGTACAGAGCATCTTCCATCGCGCCATCGCTCAGGTTGTACCAATGC 3861 Query 18496 TGCAGAAAGTGGATGCGCAGCATCGTTTC 18524 |||| |||| ||||| ||||| ||||| Sbjct 3860 TGCATGCAGTGAATGCGTAGCATGGTTTC 3832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127884549425720