Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08] 165 sequences; 9,358,797 total letters Query= NC_026611.1 Length=43129 Score E Sequences producing significant alignments: (Bits) Value seq57 154 4e-33 >seq57 Length=4629 Score = 154 bits (170), Expect = 4e-33 Identities = 333/490 (68%), Gaps = 10/490 (2%) Strand=Plus/Minus Query 22385 GTCAATTTTCTTGGCATGCTCAGTGAGATGGTTGGGGGCTAGGTGCGCGTATCTCCTGAC 22444 ||| |||||| | |||||||| || | ||| || || || ||||| || || || | || Sbjct 1096 GTCTATTTTCCTCGCATGCTCTGTCAAATGATTAGGCGCAAGGTGAGCATACCTACGAAC 1037 Query 22445 CATCTCTATGCACTCCCAGCCTCCCATTTCTTGGAGCGCTGAAAGCGGTACTCCAGCTTG 22504 ||| |||||| ||||||| || |||||||| || ||| |||| | || || || | || Sbjct 1036 CATTTCTATGGACTCCCATCCGCCCATTTCCTGAAGCACTGATAATGGGACGCCTGACTG 977 Query 22505 GATTAGCCAACTCGCCCACGTGTGCCGGAGATCGTGAAATCTGAAATCCTCTATCCCGGC 22564 || ||||| || ||||| ||||| | ||| || || || | |||||| || || || || Sbjct 976 AATCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCAATTCCTGC 917 Query 22565 CCT-CTTTAGTCCAATATTCCACGCTGTATTGTCGTCAACCCTCATCTTTCGCACTGCGG 22623 | | | | ||| ||| | ||| ||| ||| | | |||||| | || || | Sbjct 916 ACGACGACAAGCTGATAG-CCATGATGTCTTGCTGTCGATGCGCATCTTCCTGACCGCAG 858 Query 22624 GTGTTTTTGTCCCATCTGGCCGGTAACCAGGTTTTGTATGAACAAACACCCA-CCGCGAG 22682 | ||| ||| ||||||| || | | | | || ||||| ||||||||||| | || Sbjct 857 GCGTTGATGTTCCATCTGCTCGCTTAGCCGCCTTGGTATGTACAAACACCCATTTGTGA- 799 Query 22683 TGCTTCCCTATCTGATCGCGAAGAACTCGACACGCTGTGTCATTGAGTGCGACGCCAAT- 22741 ||||| ||||| ||||| || | ||| ||| || || || || || || || ||||| Sbjct 798 TGCTTGCCTATTTGATCACGCAACACTTTACAGGCGGTATCGTTCAGCGCCACACCAATG 739 Query 22742 -CGCCTTACCTCCCTTTGC-GTTTTCCGGGTTTATCCACGCAACCTTCCTCTGCATGTCT 22799 ||| | | ||||| | ||| || || | ||| ||||| | ||||||||| Sbjct 738 GCGCGGT---TTGATTTGCTCTCTTCTGGATTCACCCAGGCAACTCGTCGCTGCATGTCG 682 Query 22800 ACCTGGCACCACTCTAGATCCAGAATGTTAGAGCGCCTTAATCCAGTAGCTAGGGCAAAA 22859 | || ||| || |||| | ||||| || || | ||||| || || ||||| Sbjct 681 ATTTGTTGCCATTCCAGATTTATGATGTTCGACTTTCTCAGACCAGTTGCCAGCGCAAAC 622 Query 22860 ATAACGACAG 22869 | ||||||| Sbjct 621 TTGACGACAG 612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137890929819430