Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08]
165 sequences; 9,358,797 total letters
Query= NC_026611.1
Length=43129
Score E
Sequences producing significant alignments: (Bits) Value
seq57 154 4e-33
>seq57
Length=4629
Score = 154 bits (170), Expect = 4e-33
Identities = 333/490 (68%), Gaps = 10/490 (2%)
Strand=Plus/Minus
Query 22385 GTCAATTTTCTTGGCATGCTCAGTGAGATGGTTGGGGGCTAGGTGCGCGTATCTCCTGAC 22444
||| |||||| | |||||||| || | ||| || || || ||||| || || || | ||
Sbjct 1096 GTCTATTTTCCTCGCATGCTCTGTCAAATGATTAGGCGCAAGGTGAGCATACCTACGAAC 1037
Query 22445 CATCTCTATGCACTCCCAGCCTCCCATTTCTTGGAGCGCTGAAAGCGGTACTCCAGCTTG 22504
||| |||||| ||||||| || |||||||| || ||| |||| | || || || | ||
Sbjct 1036 CATTTCTATGGACTCCCATCCGCCCATTTCCTGAAGCACTGATAATGGGACGCCTGACTG 977
Query 22505 GATTAGCCAACTCGCCCACGTGTGCCGGAGATCGTGAAATCTGAAATCCTCTATCCCGGC 22564
|| ||||| || ||||| ||||| | ||| || || || | |||||| || || || ||
Sbjct 976 AATCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCAATTCCTGC 917
Query 22565 CCT-CTTTAGTCCAATATTCCACGCTGTATTGTCGTCAACCCTCATCTTTCGCACTGCGG 22623
| | | | ||| ||| | ||| ||| ||| | | |||||| | || || |
Sbjct 916 ACGACGACAAGCTGATAG-CCATGATGTCTTGCTGTCGATGCGCATCTTCCTGACCGCAG 858
Query 22624 GTGTTTTTGTCCCATCTGGCCGGTAACCAGGTTTTGTATGAACAAACACCCA-CCGCGAG 22682
| ||| ||| ||||||| || | | | | || ||||| ||||||||||| | ||
Sbjct 857 GCGTTGATGTTCCATCTGCTCGCTTAGCCGCCTTGGTATGTACAAACACCCATTTGTGA- 799
Query 22683 TGCTTCCCTATCTGATCGCGAAGAACTCGACACGCTGTGTCATTGAGTGCGACGCCAAT- 22741
||||| ||||| ||||| || | ||| ||| || || || || || || || |||||
Sbjct 798 TGCTTGCCTATTTGATCACGCAACACTTTACAGGCGGTATCGTTCAGCGCCACACCAATG 739
Query 22742 -CGCCTTACCTCCCTTTGC-GTTTTCCGGGTTTATCCACGCAACCTTCCTCTGCATGTCT 22799
||| | | ||||| | ||| || || | ||| ||||| | |||||||||
Sbjct 738 GCGCGGT---TTGATTTGCTCTCTTCTGGATTCACCCAGGCAACTCGTCGCTGCATGTCG 682
Query 22800 ACCTGGCACCACTCTAGATCCAGAATGTTAGAGCGCCTTAATCCAGTAGCTAGGGCAAAA 22859
| || ||| || |||| | ||||| || || | ||||| || || |||||
Sbjct 681 ATTTGTTGCCATTCCAGATTTATGATGTTCGACTTTCTCAGACCAGTTGCCAGCGCAAAC 622
Query 22860 ATAACGACAG 22869
| |||||||
Sbjct 621 TTGACGACAG 612
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 137890929819430
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |