Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08] 165 sequences; 9,358,797 total letters Query= NC_027339.1 Length=38389 Score E Sequences producing significant alignments: (Bits) Value seq57 405 1e-108 >seq57 Length=4629 Score = 405 bits (448), Expect = 1e-108 Identities = 733/1060 (69%), Gaps = 19/1060 (2%) Strand=Plus/Minus Query 21245 GGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAAT-CAATAAGTTACACATCATTA 21303 || || |||||||| |||| || |||||| ||| |||| |||||| | | || Sbjct 1212 GGCCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTT 1153 Query 21304 GTACCTTCCTTATTTTTTGACTGGGACAAATTTGGGACCGATGGGTTC--AGGATCGAGT 21361 || | ||| || ||| || ||||||| ||||||||| || | | || || Sbjct 1152 ATATCCTCCATAATTTCAGAGTGGGACATATTTGGGAC--ATTATCACCAAAAATGTCGT 1095 Query 21362 CTATTTGCCGTGCGTGTTCGGTAAGGTGATTAGGTGCAAGGTGAGCATATCGACGAACCA 21421 |||||| || || || || || | |||||||| |||||||||||||| | |||||||| Sbjct 1094 CTATTTTCCTCGCATGCTCTGTCAAATGATTAGGCGCAAGGTGAGCATACCTACGAACCA 1035 Query 21422 TTTCGATAGACTCCCAGCCTCCCATTTCCTGTAACACTGACAATGGGACTCCGGCTTGAA 21481 |||| || |||||||| || ||||||||||| | |||||| |||||||| || | |||| Sbjct 1034 TTTCTATGGACTCCCATCCGCCCATTTCCTGAAGCACTGATAATGGGACGCCTGACTGAA 975 Query 21482 CCAGCCAACTTGCCCAGGTGTGTCTCAAGTCGTGAAATCTGAAATCATCAATACCAGCCC 21541 |||||| ||||||||||||||||| | ||| || || | |||||| ||||| || || | Sbjct 974 TCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCAATTCCTGCAC 915 Query 21542 GTCTCAGCGCCGCTTTCCAGGCTGTGTTTGCGTCATACCGCATCTTCCTTACTGTTGGCG 21601 | | || | | ||| | ||| || ||| ||||||||||| || | |||| Sbjct 914 GACGACAAGCTGATAGCCATGATGTCTTGCTGTCGATGCGCATCTTCCTGACCGCAGGCG 855 Query 21602 CTTTCGTTCCGTCTGGTTTGGTA-CAGCTTTCCTTGTATACAAATACCCAACGGTGATGA 21660 | ||||| |||| | || | || || | | |||||| ||||| |||||| Sbjct 854 TTGATGTTCCATCTGCTCGCTTAGCCGCCTTGGTA-TGTACAAACACCCATTTGTGATGC 796 Query 21661 TTCCCGATTTGTTTTTTCAATACGCGACATGCAGTATCATTCAGCGCAACGCCAATTGCG 21720 || || ||||| | ||| || ||| || ||||| |||||||| || ||||| ||| Sbjct 795 TTGCCTATTTGATCACGCAACACTTTACAGGCGGTATCGTTCAGCGCCACACCAATGGCG 736 Query 21721 CGGTTTGATTTACTCTCTTCCGGGTTTATCCATGCCACCCGGCGCTGCATGTCTATTTGT 21780 ||||||||||| |||||||| || || | ||| || || || ||||||||||| |||||| Sbjct 735 CGGTTTGATTTGCTCTCTTCTGGATTCACCCAGGCAACTCGTCGCTGCATGTCGATTTGT 676 Query 21781 TGCCATTCAAGGTTGATGATGTTCGAGCGTCTTAAGCCTGTTGCCAGTGCAAATTCAACA 21840 |||||||| || || ||||||||||| ||| | || |||||||| ||||| | || Sbjct 675 TGCCATTCCAGATTTATGATGTTCGACTTTCTCAGACCAGTTGCCAGCGCAAACTTGACG 616 Query 21841 ACAGACTTTAATGGCTCCGGACATTCATCAATCAGCCTTTGTGCTTCATGAGGCTCCAGC 21900 ||||| || | ||| || || || |||||||| || | || |||||| | |||||| Sbjct 615 ACAGATTTCAGTGGTTCGGGGCACTCATCAATAAGGCGTTTTGCTTCCTCCTTTTCCAGC 556 Query 21901 CAGCGGATACG-TTTATTCT-TCGGTTGAGGCACTTTAATAATTGGTGCCTTATCCAGCA 21958 || | || || || |||| | | | || | || || | || || || |||||| Sbjct 555 CATCTGACTCGCTTGTTTCTGACCGCT--GGTATCTTGATGACAGGCGCTTTTTCCAGCC 498 Query 21959 TTTTCCATTCACGCTCTGCGGCTCTTAGCAGGGCCTTTATAAATGAAAGATGCGTAGCCT 22018 ||||| || || ||||| || | || | ||||||||| | | ||||||| | |||| Sbjct 497 ACTTCCAGTCGCGTTCTGCAGCACGGAGAATGGCCTTTATCATGGCAAGATGCTTTGCCT 438 Query 22019 TCGTTGCAACGGACGCTGGTTTTGGCGTGTATTCTGGAACAGGTTTCCCtttttttCTGC 22078 | || | || |||| ||||| || | || | ||| ||||| | || Sbjct 437 TTGTCTGAGTTGATACTGGCTTTGGTTCATAAACAGGCAGTTCTTTACCTTTCCTGATGG 378 Query 22079 ATGCTTCTGCCCTGAGTTTCCAGTTTTCCTCATGACGCCGGTTCGTCAT--TTTCTGC-- 22134 || | | | ||||||| |||| | || | | || || |||||| Sbjct 377 CGGCCTGAACTTTCTGTTTCCATATTTC----TTTCGTCTTTCTGTTATGCATTCTGCTT 322 Query 22135 ATTGCTGAATAAATTTTTGATTCAGTAATGTCTTTTAGTTGCATTCCTGCGAAATGTTGA 22194 | || || ||||| |||| || | || ||||| || || || | ||||||| | Sbjct 321 ACAGCAGAGTAAATCTTTGCCTCCGAGATATCTTTAAGCCTTATACCCTCAAAATGTTCA 262 Query 22195 AGCCAGAATCCGATCCGGCTTTTGTCATCGTCCAGTGATTTTTTATGTGCTTTCTCTTCG 22254 |||||||| | ||||||||||| || || || |||||||||| ||||| || || Sbjct 261 AGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCA 202 Query 22255 AGCCACCTGACACACGCTTCCTCAAACGTCATATCAGGTA 22294 ||||| || | || || || ||||| || | |||||||| Sbjct 201 AGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTA 162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122722959539230