Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08] 165 sequences; 9,358,797 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq28 149 5e-31 >seq28 Length=426313 Score = 149 bits (164), Expect = 5e-31 Identities = 391/585 (67%), Gaps = 24/585 (4%) Strand=Plus/Minus Query 43721 TATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAA 43780 || || || || |||||||||||||| | || | || || |||||||| || || ||| Sbjct 106957 TACCACGATATCTGGCAAATGTACAAGCAGGCCGAAGCTTCCTTTTGGACTGCTGAGGAA 106898 Query 43781 GTTGATTTGACTAAAGACTTAGCAC-ATTGGATTG--CATTAAAACCACAA-GAAAAACA 43836 | || || ||| || || ||| | |||| | | | ||| | || |||||| Sbjct 106897 ATAGACCTGGGTAAGGATTT-GCATGACTGGAATAATCGTATGAACGATAATGAAAAATT 106839 Query 43837 TTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTT 43896 || || || || | || || |||||||| ||||| || ||||||||||| || Sbjct 106838 CTTCATCTCGAGAGTCCTTGCCTTCTTTGCTGCCTCTGACGGTATTGTCAATGAAAACTT 106779 Query 43897 GGTTAGTCGGTTT--GCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTT 43954 ||| | ||| | || || |||||| | || |||||| ||| ||||| || || Sbjct 106778 GGTG-GAAAATTTCAGTGCT-GAGGTTCAACTTCCCGAAGCAAAATGCTTTTACGGTTTC 106721 Query 43955 CAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATC 44014 || || || || || ||||| || || | ||| | ||||| ||||| |||||| Sbjct 106720 CAGATCATGATGGAGAACATTCACTCCGAGACTTACTCCTTGCTGATTGATACTTACATC 106661 Query 44015 AAAGATGGGCACGAGAAGCATCGATT---GTTTAATGCGATAGAAACAGTACCTGCGATT 44071 |||||| || ||| | | ||| ||| ||||| || || || | || || Sbjct 106660 AAAGATC--CAAAAGAGTC-TGAATTCCTGTTCAATGCCATCGAGACCATTCCATGTATC 106604 Query 44072 AAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCT------TTTGGA 44125 ||| | || || ||||||||| | | |||||| ||| |||| | || | Sbjct 106603 AAAGAAAAGGCTGACTGGGCCATGAGATGGAT---TTCTGATGACGATGCATTGTTCGCT 106547 Query 44126 GAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCC 44185 ||||| | || || || || | ||| || || || |||||||||||||| ||||| | Sbjct 106546 GAACGTTTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTTTCAGGATCTTTTGCTTCT 106487 Query 44186 ATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATA 44245 || || ||||| ||||| ||||| | ||||| || ||||| || || |||||| | || Sbjct 106486 ATCTTCTGGTTGAAGAAGAGAGGTCTCATGCCAGGTTTGACCTTCTCCAATGAGCTTATT 106427 Query 44246 AGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTT 44290 | | || || || ||||| || |||||||||||| || || Sbjct 106426 TGCAGAGACGAGGGATTACACACTGACTTTGCTTGCTTGCTATTT 106382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455200740825