Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08] 165 sequences; 9,358,797 total letters Query= NC_028696.2 Length=41338 Score E Sequences producing significant alignments: (Bits) Value seq57 764 0.0 >seq57 Length=4629 Score = 764 bits (846), Expect = 0.0 Identities = 811/1077 (75%), Gaps = 0/1077 (0%) Strand=Plus/Minus Query 21135 GAACTTCTAAGCCGTGGGTCGCAGGTTCGAATCCTGCAGGGCGCGCCATTATATTTCAGC 21194 || |||||||| |||||| |||||||||||||||||||||||||||||||| | |||| Sbjct 1228 GACCTTCTAAGTCGTGGGCCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAAT 1169 Query 21195 AAGTTACCTATNNNNNNNNNNNNNNNNNNNNNNCTGGTGGGACATATTTGGGACATCATC 21254 |||||| | |||||||||||||||||||| ||| Sbjct 1168 CAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACATATTTGGGACATTATC 1109 Query 21255 ACTGAAAATCGAGTCAATTTGCTTTGCGTGTTCCGTTAAATGGTTCGGAGCAAGGTGAGC 21314 || ||||| ||| |||| | | || || || || ||||| || || ||||||||||| Sbjct 1108 ACCAAAAATGTCGTCTATTTTCCTCGCATGCTCTGTCAAATGATTAGGCGCAAGGTGAGC 1049 Query 21315 ATATCGGCGCACCATCTCGATGCTCTCCCATCCTCCCATTTCCTGCAGAACAGAAAGCGG 21374 ||| | || ||||| || ||| ||||||||| ||||||||||| || || || | || Sbjct 1048 ATACCTACGAACCATTTCTATGGACTCCCATCCGCCCATTTCCTGAAGCACTGATAATGG 989 Query 21375 CACTCCGGACTGAATTAGCCAACTGGCCCACGTGTGCCTCAGATCGTGGAAACGGAAATC 21434 || || |||||||| ||||| || ||||| ||||| || || || |||||||||||||| Sbjct 988 GACGCCTGACTGAATCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATC 929 Query 21435 ATCAATTCCAGCCCGGCGGCAAGCTGCATTCCATGCTCGCTGGTCATCGACGCGCATCTT 21494 |||||||| || || || ||||||| ||||| | || | |||| ||||||||| Sbjct 928 TTCAATTCCTGCACGACGACAAGCTGATAGCCATGATGTCTTGCTGTCGATGCGCATCTT 869 Query 21495 TCTGATAGTCGGCGTCTTTGAGCCATCGGGACGGATGCCTTCTTTCGTATGCACGAACAC 21554 |||| | ||||| || ||||| | || | | | || ||||| || ||||| Sbjct 868 CCTGACCGCAGGCGTTGATGTTCCATCTGCTCGCTTAGCCGCCTTGGTATGTACAAACAC 809 Query 21555 CCATTTATGATGCTTACCAATCTGGTCACGCAGAACCTTACAGGCCGTGTCATTCAGCGC 21614 |||||| |||||||| || || || ||||||| || |||||||| || || |||||||| Sbjct 808 CCATTTGTGATGCTTGCCTATTTGATCACGCAACACTTTACAGGCGGTATCGTTCAGCGC 749 Query 21615 TACGCCAATAGCGCGGTTTGACTTGCTGTCTTCAGGGTTCACCCAGGCAACGCGACGTTG 21674 || ||||| ||||||||||| ||||| ||||| || |||||||||||||| || || || Sbjct 748 CACACCAATGGCGCGGTTTGATTTGCTCTCTTCTGGATTCACCCAGGCAACTCGTCGCTG 689 Query 21675 CATGTCAATCTGTTGCCATTCCATATTGATGATGTTAGACCGCCTAAGTCCCGTTGCCAG 21734 |||||| || ||||||||||||| ||| |||||||| ||| || || || |||||||| Sbjct 688 CATGTCGATTTGTTGCCATTCCAGATTTATGATGTTCGACTTTCTCAGACCAGTTGCCAG 629 Query 21735 CGCAAATTTAACAACAGATTTCAACGGTTCCTGACATTCTTCAATAAGTCTTTTTGCCTC 21794 |||||| || || |||||||||| ||||| | || || |||||||| | |||||| || Sbjct 628 CGCAAACTTGACGACAGATTTCAGTGGTTCGGGGCACTCATCAATAAGGCGTTTTGCTTC 569 Query 21795 ATCACGCTCAAGCCACCTCACGCGTTTGTTTCTGACAGCAGGCACCTTGATTACAGGTGC 21854 || || ||||| || || || ||||||||||| || || | |||||| ||||| || Sbjct 568 CTCCTTTTCCAGCCATCTGACTCGCTTGTTTCTGACCGCTGGTATCTTGATGACAGGCGC 509 Query 21855 TTTCTCCAGCCATTTCCAGTCACGTTCTGCTGCACGCAAAATCGCCTTCATTAATGCCAG 21914 ||| |||||||| |||||||| |||||||| ||||| | ||| ||||| || | || || Sbjct 508 TTTTTCCAGCCACTTCCAGTCGCGTTCTGCAGCACGGAGAATGGCCTTTATCATGGCAAG 449 Query 21915 ATGTTTGGCCTTAGTGGAGGTTGTGACCGGCTTGGGCTCAAATACTGGCGCTTCTTTACC 21974 ||| || ||||| || |||| || ||||| || ||| | || ||| ||||||||| Sbjct 448 ATGCTTTGCCTTTGTCTGAGTTGATACTGGCTTTGGTTCATAAACAGGCAGTTCTTTACC 389 Query 21975 CTTTCTCTTGGCAGATTCAACTTTCTGCTGCCATATCTCCTTTACCTTCCTGTTTTGCAT 22034 || || |||| | | ||||||||| | |||||| || || ||| ||||| ||||| Sbjct 388 TTTCCTGATGGCGGCCTGAACTTTCTGTTTCCATATTTCTTTCGTCTTTCTGTTATGCAT 329 Query 22035 CCTGCTCACCGCGGCGTAAATCTTCGCCTCAGTGATATCCTTTATCCTTACTCCTTCGAA 22094 ||||| || || | ||||||||| ||||| | |||||| || | ||||| || || || Sbjct 328 TCTGCTTACAGCAGAGTAAATCTTTGCCTCCGAGATATCTTTAAGCCTTATACCCTCAAA 269 Query 22095 ATGCTCAATCCAGAATCCCATCCGGCCTTTATCGGTATCGAGCGATTTCTTGTCTGCTTT 22154 ||| |||| |||||| | ||||||| |||||| | |||||| ||||| || || ||||| Sbjct 268 ATGTTCAAGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTT 209 Query 22155 CTCTTCCAGCCAGCGGAGGCATGCTTCTTCAAAAGTCACTTCAGGAAAGTCGCCTAG 22211 || || ||||| | ||||| || ||||||||||| || ||||| || || ||||| Sbjct 208 TTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAG 152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132159741049000