Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08]
165 sequences; 9,358,797 total letters
Query= NC_028696.2
Length=41338
Score E
Sequences producing significant alignments: (Bits) Value
seq57 764 0.0
>seq57
Length=4629
Score = 764 bits (846), Expect = 0.0
Identities = 811/1077 (75%), Gaps = 0/1077 (0%)
Strand=Plus/Minus
Query 21135 GAACTTCTAAGCCGTGGGTCGCAGGTTCGAATCCTGCAGGGCGCGCCATTATATTTCAGC 21194
|| |||||||| |||||| |||||||||||||||||||||||||||||||| | ||||
Sbjct 1228 GACCTTCTAAGTCGTGGGCCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAAT 1169
Query 21195 AAGTTACCTATNNNNNNNNNNNNNNNNNNNNNNCTGGTGGGACATATTTGGGACATCATC 21254
|||||| | |||||||||||||||||||| |||
Sbjct 1168 CAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACATATTTGGGACATTATC 1109
Query 21255 ACTGAAAATCGAGTCAATTTGCTTTGCGTGTTCCGTTAAATGGTTCGGAGCAAGGTGAGC 21314
|| ||||| ||| |||| | | || || || || ||||| || || |||||||||||
Sbjct 1108 ACCAAAAATGTCGTCTATTTTCCTCGCATGCTCTGTCAAATGATTAGGCGCAAGGTGAGC 1049
Query 21315 ATATCGGCGCACCATCTCGATGCTCTCCCATCCTCCCATTTCCTGCAGAACAGAAAGCGG 21374
||| | || ||||| || ||| ||||||||| ||||||||||| || || || | ||
Sbjct 1048 ATACCTACGAACCATTTCTATGGACTCCCATCCGCCCATTTCCTGAAGCACTGATAATGG 989
Query 21375 CACTCCGGACTGAATTAGCCAACTGGCCCACGTGTGCCTCAGATCGTGGAAACGGAAATC 21434
|| || |||||||| ||||| || ||||| ||||| || || || ||||||||||||||
Sbjct 988 GACGCCTGACTGAATCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATC 929
Query 21435 ATCAATTCCAGCCCGGCGGCAAGCTGCATTCCATGCTCGCTGGTCATCGACGCGCATCTT 21494
|||||||| || || || ||||||| ||||| | || | |||| |||||||||
Sbjct 928 TTCAATTCCTGCACGACGACAAGCTGATAGCCATGATGTCTTGCTGTCGATGCGCATCTT 869
Query 21495 TCTGATAGTCGGCGTCTTTGAGCCATCGGGACGGATGCCTTCTTTCGTATGCACGAACAC 21554
|||| | ||||| || ||||| | || | | | || ||||| || |||||
Sbjct 868 CCTGACCGCAGGCGTTGATGTTCCATCTGCTCGCTTAGCCGCCTTGGTATGTACAAACAC 809
Query 21555 CCATTTATGATGCTTACCAATCTGGTCACGCAGAACCTTACAGGCCGTGTCATTCAGCGC 21614
|||||| |||||||| || || || ||||||| || |||||||| || || ||||||||
Sbjct 808 CCATTTGTGATGCTTGCCTATTTGATCACGCAACACTTTACAGGCGGTATCGTTCAGCGC 749
Query 21615 TACGCCAATAGCGCGGTTTGACTTGCTGTCTTCAGGGTTCACCCAGGCAACGCGACGTTG 21674
|| ||||| ||||||||||| ||||| ||||| || |||||||||||||| || || ||
Sbjct 748 CACACCAATGGCGCGGTTTGATTTGCTCTCTTCTGGATTCACCCAGGCAACTCGTCGCTG 689
Query 21675 CATGTCAATCTGTTGCCATTCCATATTGATGATGTTAGACCGCCTAAGTCCCGTTGCCAG 21734
|||||| || ||||||||||||| ||| |||||||| ||| || || || ||||||||
Sbjct 688 CATGTCGATTTGTTGCCATTCCAGATTTATGATGTTCGACTTTCTCAGACCAGTTGCCAG 629
Query 21735 CGCAAATTTAACAACAGATTTCAACGGTTCCTGACATTCTTCAATAAGTCTTTTTGCCTC 21794
|||||| || || |||||||||| ||||| | || || |||||||| | |||||| ||
Sbjct 628 CGCAAACTTGACGACAGATTTCAGTGGTTCGGGGCACTCATCAATAAGGCGTTTTGCTTC 569
Query 21795 ATCACGCTCAAGCCACCTCACGCGTTTGTTTCTGACAGCAGGCACCTTGATTACAGGTGC 21854
|| || ||||| || || || ||||||||||| || || | |||||| ||||| ||
Sbjct 568 CTCCTTTTCCAGCCATCTGACTCGCTTGTTTCTGACCGCTGGTATCTTGATGACAGGCGC 509
Query 21855 TTTCTCCAGCCATTTCCAGTCACGTTCTGCTGCACGCAAAATCGCCTTCATTAATGCCAG 21914
||| |||||||| |||||||| |||||||| ||||| | ||| ||||| || | || ||
Sbjct 508 TTTTTCCAGCCACTTCCAGTCGCGTTCTGCAGCACGGAGAATGGCCTTTATCATGGCAAG 449
Query 21915 ATGTTTGGCCTTAGTGGAGGTTGTGACCGGCTTGGGCTCAAATACTGGCGCTTCTTTACC 21974
||| || ||||| || |||| || ||||| || ||| | || ||| |||||||||
Sbjct 448 ATGCTTTGCCTTTGTCTGAGTTGATACTGGCTTTGGTTCATAAACAGGCAGTTCTTTACC 389
Query 21975 CTTTCTCTTGGCAGATTCAACTTTCTGCTGCCATATCTCCTTTACCTTCCTGTTTTGCAT 22034
|| || |||| | | ||||||||| | |||||| || || ||| ||||| |||||
Sbjct 388 TTTCCTGATGGCGGCCTGAACTTTCTGTTTCCATATTTCTTTCGTCTTTCTGTTATGCAT 329
Query 22035 CCTGCTCACCGCGGCGTAAATCTTCGCCTCAGTGATATCCTTTATCCTTACTCCTTCGAA 22094
||||| || || | ||||||||| ||||| | |||||| || | ||||| || || ||
Sbjct 328 TCTGCTTACAGCAGAGTAAATCTTTGCCTCCGAGATATCTTTAAGCCTTATACCCTCAAA 269
Query 22095 ATGCTCAATCCAGAATCCCATCCGGCCTTTATCGGTATCGAGCGATTTCTTGTCTGCTTT 22154
||| |||| |||||| | ||||||| |||||| | |||||| ||||| || || |||||
Sbjct 268 ATGTTCAAGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTT 209
Query 22155 CTCTTCCAGCCAGCGGAGGCATGCTTCTTCAAAAGTCACTTCAGGAAAGTCGCCTAG 22211
|| || ||||| | ||||| || ||||||||||| || ||||| || || |||||
Sbjct 208 TTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAG 152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 132159741049000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |