Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08] 165 sequences; 9,358,797 total letters Query= NC_029120.1 Length=60875 Score E Sequences producing significant alignments: (Bits) Value seq57 845 0.0 >seq57 Length=4629 Score = 845 bits (936), Expect = 0.0 Identities = 806/1031 (78%), Gaps = 0/1031 (0%) Strand=Plus/Minus Query 35 CATTCTAATTCAATTGCTTATGCTTTCTTTGCATCCTCAAAAACCTCAGGGTGGGACAAA 94 |||| |||||||| ||| || |||||| |||||| | || |||| |||||||| | Sbjct 1182 CATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACATA 1123 Query 95 TTTGGGACATCGTCACTCAATATGTCGTCAATTTTCCTCGCGTGCTCTGTCAAATGATTA 154 |||||||||| |||| || |||||||| ||||||||||| |||||||||||||||||| Sbjct 1122 TTTGGGACATTATCACCAAAAATGTCGTCTATTTTCCTCGCATGCTCTGTCAAATGATTA 1063 Query 155 GGTGCAAGGTGTGCGTACCTACGCACCATTTCGATAGACTCCCAGCCGCCCATTTCCTGA 214 || |||||||| || |||||||| |||||||| || |||||||| ||||||||||||||| Sbjct 1062 GGCGCAAGGTGAGCATACCTACGAACCATTTCTATGGACTCCCATCCGCCCATTTCCTGA 1003 Query 215 AGTACTGACAGCGGTACACCTGACTGAATTAACCAACTGGCCCAAGTGTGGCGGAGGTCA 274 || ||||| | || || ||||||||||| | ||| || ||||| ||||| | ||||||| Sbjct 1002 AGCACTGATAATGGGACGCCTGACTGAATCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCA 943 Query 275 TGAAAACGGAAATTTTCAATTCCTGCCCGACGACATGCTGTTAACCACGATGTGTTATAG 334 || |||||||||| |||||||||||| |||||||| |||| || ||| ||||| || | Sbjct 942 TGGAAACGGAAATCTTCAATTCCTGCACGACGACAAGCTGATAGCCATGATGTCTTGCTG 883 Query 335 TCCAGGCGCATCTTTCTGATGCTTGGTGTCATTGTCCCGTCAGGCCTTCTGGCAGCAGTG 394 || | ||||||||| |||| || || ||| || || | | | || || || Sbjct 882 TCGATGCGCATCTTCCTGACCGCAGGCGTTGATGTTCCATCTGCTCGCTTAGCCGCCTTG 823 Query 395 GTATAAACAAACACCCAGCGGTGATGTTTGCCTATTTGATCACGCAACACCTTGCAGGCA 454 |||| ||||||||||| |||||| ||||||||||||||||||||||| || ||||| Sbjct 822 GTATGTACAAACACCCATTTGTGATGCTTGCCTATTTGATCACGCAACACTTTACAGGCG 763 Query 455 GTGTCATTCAGTGCGACCCCAATAGCGCGGTTTGACTTACTGTCTTCAGGGTTTACCCAG 514 || || ||||| || || ||||| ||||||||||| || || ||||| || || |||||| Sbjct 762 GTATCGTTCAGCGCCACACCAATGGCGCGGTTTGATTTGCTCTCTTCTGGATTCACCCAG 703 Query 515 GCAACACGTCGCTGCATATCGATTTGTTGCCACTCCAGATTAATAATGTTTGATCTCCTC 574 ||||| ||||||||||| |||||||||||||| |||||||| || ||||| || | ||| Sbjct 702 GCAACTCGTCGCTGCATGTCGATTTGTTGCCATTCCAGATTTATGATGTTCGACTTTCTC 643 Query 575 AGGCCAGTTGCCAGTGCAAATTTAACTACAGATTTCAGGGGATCAGAACATGCATCAATG 634 || ||||||||||| ||||| || || ||||||||||| || || | || ||||||| Sbjct 642 AGACCAGTTGCCAGCGCAAACTTGACGACAGATTTCAGTGGTTCGGGGCACTCATCAATA 583 Query 635 AGTCTCCTGGCTTCTTCTTTTTCCAGCCATCTCACGCGTTTGTTTTTTACGGCAGGTATT 694 || | | ||||| || |||||||||||||| || || |||||| | || || ||||| Sbjct 582 AGGCGTTTTGCTTCCTCCTTTTCCAGCCATCTGACTCGCTTGTTTCTGACCGCTGGTATC 523 Query 695 TTGATTACAGGTGCTTTTTCAAGCCATTTCCAGTCTCGCTCTGCGGCGCGCAGAATAGCC 754 ||||| ||||| |||||||| ||||| |||||||| || ||||| || || ||||| ||| Sbjct 522 TTGATGACAGGCGCTTTTTCCAGCCACTTCCAGTCGCGTTCTGCAGCACGGAGAATGGCC 463 Query 755 TTGATCATTGCCAGGTGTGTTGCTTTTGTTTGCGTGCTCACCGATTTAGGTATATAGGCT 814 || ||||| || || || |||| ||||| || || || | || ||| ||| | Sbjct 462 TTTATCATGGCAAGATGCTTTGCCTTTGTCTGAGTTGATACTGGCTTTGGTTCATAAACA 403 Query 815 GGTGGTTCTTTCCCTTTTCTTAATGCAGCCTCCACCTGCAACTTCCATCTCTCCTTTGTT 874 || ||||||| ||||| || | || |||| || | | |||||| | || || || Sbjct 402 GGCAGTTCTTTACCTTTCCTGATGGCGGCCTGAACTTTCTGTTTCCATATTTCTTTCGTC 343 Query 875 TTTCGGTTATACGCTTTGCTGATAACTGAGTAGATCATTGCCTCCGATATATCCTTAATC 934 |||| ||||| | | |||| | | | ||||| ||| |||||||||| ||||| |||| | Sbjct 342 TTTCTGTTATGCATTCTGCTTACAGCAGAGTAAATCTTTGCCTCCGAGATATCTTTAAGC 283 Query 935 CTTATTCCCTCGAAATGCTCAATCCAGAATGCGATTCTGGATTTATCGGAATCGATGGAT 994 ||||| ||||| ||||| |||| |||||| | || | | |||||| ||||||| ||| Sbjct 282 CTTATACCCTCAAAATGTTCAAGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGAT 223 Query 995 TTCTTGTCGGCTTTTTCCTCAAGCCATCTCAGGCAGGCTTCTTCGAAAGTGACATCTGGC 1054 || || || |||||||||||||||||||| |||||||| ||||| ||||||||||| || Sbjct 222 TTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGT 163 Query 1055 ATATCCCCCAG 1065 | |||||| || Sbjct 162 AAATCCCCTAG 152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194678018552010