Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08]
165 sequences; 9,358,797 total letters
Query= NC_029120.1
Length=60875
Score E
Sequences producing significant alignments: (Bits) Value
seq57 845 0.0
>seq57
Length=4629
Score = 845 bits (936), Expect = 0.0
Identities = 806/1031 (78%), Gaps = 0/1031 (0%)
Strand=Plus/Minus
Query 35 CATTCTAATTCAATTGCTTATGCTTTCTTTGCATCCTCAAAAACCTCAGGGTGGGACAAA 94
|||| |||||||| ||| || |||||| |||||| | || |||| |||||||| |
Sbjct 1182 CATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACATA 1123
Query 95 TTTGGGACATCGTCACTCAATATGTCGTCAATTTTCCTCGCGTGCTCTGTCAAATGATTA 154
|||||||||| |||| || |||||||| ||||||||||| ||||||||||||||||||
Sbjct 1122 TTTGGGACATTATCACCAAAAATGTCGTCTATTTTCCTCGCATGCTCTGTCAAATGATTA 1063
Query 155 GGTGCAAGGTGTGCGTACCTACGCACCATTTCGATAGACTCCCAGCCGCCCATTTCCTGA 214
|| |||||||| || |||||||| |||||||| || |||||||| |||||||||||||||
Sbjct 1062 GGCGCAAGGTGAGCATACCTACGAACCATTTCTATGGACTCCCATCCGCCCATTTCCTGA 1003
Query 215 AGTACTGACAGCGGTACACCTGACTGAATTAACCAACTGGCCCAAGTGTGGCGGAGGTCA 274
|| ||||| | || || ||||||||||| | ||| || ||||| ||||| | |||||||
Sbjct 1002 AGCACTGATAATGGGACGCCTGACTGAATCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCA 943
Query 275 TGAAAACGGAAATTTTCAATTCCTGCCCGACGACATGCTGTTAACCACGATGTGTTATAG 334
|| |||||||||| |||||||||||| |||||||| |||| || ||| ||||| || |
Sbjct 942 TGGAAACGGAAATCTTCAATTCCTGCACGACGACAAGCTGATAGCCATGATGTCTTGCTG 883
Query 335 TCCAGGCGCATCTTTCTGATGCTTGGTGTCATTGTCCCGTCAGGCCTTCTGGCAGCAGTG 394
|| | ||||||||| |||| || || ||| || || | | | || || ||
Sbjct 882 TCGATGCGCATCTTCCTGACCGCAGGCGTTGATGTTCCATCTGCTCGCTTAGCCGCCTTG 823
Query 395 GTATAAACAAACACCCAGCGGTGATGTTTGCCTATTTGATCACGCAACACCTTGCAGGCA 454
|||| ||||||||||| |||||| ||||||||||||||||||||||| || |||||
Sbjct 822 GTATGTACAAACACCCATTTGTGATGCTTGCCTATTTGATCACGCAACACTTTACAGGCG 763
Query 455 GTGTCATTCAGTGCGACCCCAATAGCGCGGTTTGACTTACTGTCTTCAGGGTTTACCCAG 514
|| || ||||| || || ||||| ||||||||||| || || ||||| || || ||||||
Sbjct 762 GTATCGTTCAGCGCCACACCAATGGCGCGGTTTGATTTGCTCTCTTCTGGATTCACCCAG 703
Query 515 GCAACACGTCGCTGCATATCGATTTGTTGCCACTCCAGATTAATAATGTTTGATCTCCTC 574
||||| ||||||||||| |||||||||||||| |||||||| || ||||| || | |||
Sbjct 702 GCAACTCGTCGCTGCATGTCGATTTGTTGCCATTCCAGATTTATGATGTTCGACTTTCTC 643
Query 575 AGGCCAGTTGCCAGTGCAAATTTAACTACAGATTTCAGGGGATCAGAACATGCATCAATG 634
|| ||||||||||| ||||| || || ||||||||||| || || | || |||||||
Sbjct 642 AGACCAGTTGCCAGCGCAAACTTGACGACAGATTTCAGTGGTTCGGGGCACTCATCAATA 583
Query 635 AGTCTCCTGGCTTCTTCTTTTTCCAGCCATCTCACGCGTTTGTTTTTTACGGCAGGTATT 694
|| | | ||||| || |||||||||||||| || || |||||| | || || |||||
Sbjct 582 AGGCGTTTTGCTTCCTCCTTTTCCAGCCATCTGACTCGCTTGTTTCTGACCGCTGGTATC 523
Query 695 TTGATTACAGGTGCTTTTTCAAGCCATTTCCAGTCTCGCTCTGCGGCGCGCAGAATAGCC 754
||||| ||||| |||||||| ||||| |||||||| || ||||| || || ||||| |||
Sbjct 522 TTGATGACAGGCGCTTTTTCCAGCCACTTCCAGTCGCGTTCTGCAGCACGGAGAATGGCC 463
Query 755 TTGATCATTGCCAGGTGTGTTGCTTTTGTTTGCGTGCTCACCGATTTAGGTATATAGGCT 814
|| ||||| || || || |||| ||||| || || || | || ||| ||| |
Sbjct 462 TTTATCATGGCAAGATGCTTTGCCTTTGTCTGAGTTGATACTGGCTTTGGTTCATAAACA 403
Query 815 GGTGGTTCTTTCCCTTTTCTTAATGCAGCCTCCACCTGCAACTTCCATCTCTCCTTTGTT 874
|| ||||||| ||||| || | || |||| || | | |||||| | || || ||
Sbjct 402 GGCAGTTCTTTACCTTTCCTGATGGCGGCCTGAACTTTCTGTTTCCATATTTCTTTCGTC 343
Query 875 TTTCGGTTATACGCTTTGCTGATAACTGAGTAGATCATTGCCTCCGATATATCCTTAATC 934
|||| ||||| | | |||| | | | ||||| ||| |||||||||| ||||| |||| |
Sbjct 342 TTTCTGTTATGCATTCTGCTTACAGCAGAGTAAATCTTTGCCTCCGAGATATCTTTAAGC 283
Query 935 CTTATTCCCTCGAAATGCTCAATCCAGAATGCGATTCTGGATTTATCGGAATCGATGGAT 994
||||| ||||| ||||| |||| |||||| | || | | |||||| ||||||| |||
Sbjct 282 CTTATACCCTCAAAATGTTCAAGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGAT 223
Query 995 TTCTTGTCGGCTTTTTCCTCAAGCCATCTCAGGCAGGCTTCTTCGAAAGTGACATCTGGC 1054
|| || || |||||||||||||||||||| |||||||| ||||| ||||||||||| ||
Sbjct 222 TTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGT 163
Query 1055 ATATCCCCCAG 1065
| |||||| ||
Sbjct 162 AAATCCCCTAG 152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 194678018552010
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |