Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08]
165 sequences; 9,358,797 total letters
Query= NC_030919.1
Length=42418
Score E
Sequences producing significant alignments: (Bits) Value
seq57 387 4e-103
>seq57
Length=4629
Score = 387 bits (428), Expect = 4e-103
Identities = 678/979 (69%), Gaps = 10/979 (1%)
Strand=Plus/Minus
Query 3396 TCCTTATTTTTACTGTGGGACATATTTGGGACAGAAGTACCAAAAATCGAGTCAATTTGT 3455
||| || ||| | ||||||||||||||||||| | ||||||||| ||| ||||
Sbjct 1146 TCCATAATTTCAGAGTGGGACATATTTGGGACATTATCACCAAAAATGTCGTCTATTTTC 1087
Query 3456 CGAGCATGTTCAGTCAGGTGATTTGGTGCCAGATGAGCATATCGGCGAACCATTTCGATA 3515
| ||||| || |||| ||||| || || || |||||||| | ||||||||||| ||
Sbjct 1086 CTCGCATGCTCTGTCAAATGATTAGGCGCAAGGTGAGCATACCTACGAACCATTTCTATG 1027
Query 3516 GACTCCCAGCCACCCATTTCCTGCAATACCGAAATCGGAACGCCAGCCTGAACTAACCAA 3575
|||||||| || ||||||||||| | || || | || ||||| | ||||| | |||
Sbjct 1026 GACTCCCATCCGCCCATTTCCTGAAGCACTGATAATGGGACGCCTGACTGAATCAGCCAG 967
Query 3576 CTTGCCCACGTGTGCCTCAGGTCATGAAAACGGAAGTCTTCAATGCCCGCTCGTTTTAAT 3635
|||||||| ||||| || |||||||| |||||||| |||||||| || || || |
Sbjct 966 CTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCAATTCCTGCACGACGACAA 907
Query 3636 GCTGCCCTCCATGCAGTATTAGCGTCATAGCGCATCTTCCTCACTACAGGTGATTTAGTT 3695
|||| ||||| || || ||| |||||||||||| || |||| | | |||
Sbjct 906 GCTGATAGCCATGATGTCTTGCTGTCGATGCGCATCTTCCTGACCGCAGGCGTTGATGTT 847
Query 3696 CCGTCTGGTTTGGT-GCTGCTTTCCT-TGTAGACGAACACCCATTTGTGATGATTGCCGA 3753
|| |||| | | || || || | |||| | ||||||||||||||||| ||||| |
Sbjct 846 CCATCTGCTCGCTTAGCCGCCTTGGTATGTACA--AACACCCATTTGTGATGCTTGCCTA 789
Query 3754 TTTGCTTTTTCAGCACCCGGCAAGCGGTATCATTCAGCGCCACTCCAATGGCATGATTAG 3813
|||| | || ||| || |||||||| ||||||||||| |||||||| | || |
Sbjct 788 TTTGATCACGCAACACTTTACAGGCGGTATCGTTCAGCGCCACACCAATGGCGCGGTTTG 729
Query 3814 ACTTGCTTTGTTCCGGGTGTATCCATGCCACCTTTCGTTGCATGTCTATCTGCTGCCACT 3873
| ||||| | ||| || | | ||| || || ||| |||||||| || || ||||| |
Sbjct 728 ATTTGCTCTCTTCTGGATTCACCCAGGCAACTCGTCGCTGCATGTCGATTTGTTGCCATT 669
Query 3874 CCAGATTGATAATGTTAGACCTCCTTAAGCCAGTAGAAAGCGCAAACTCTACGACTGACT 3933
||||||| || ||||| ||| | || | ||||| | |||||||||| ||||| || |
Sbjct 668 CCAGATTTATGATGTTCGACTTTCTCAGACCAGTTGCCAGCGCAAACTTGACGACAGATT 609
Query 3934 TTAGCGGTTCCTGGCATTCATCAATCAACCTTTTTGCCTCGTGAGGCTCAAGCCAGCGGA 3993
| || ||||| |||| |||||||| | | |||||| || | || ||||| | ||
Sbjct 608 TCAGTGGTTCGGGGCACTCATCAATAAGGCGTTTTGCTTCCTCCTTTTCCAGCCATCTGA 549
Query 3994 TACGCTTATTTTT--CGGCTGAGGAACTTTGATGATCGGAGCCTTATCCAGCATCTTCCA 4051
||||| ||| | | ||| || | ||||||| || || || |||||| ||||||
Sbjct 548 CTCGCTTGTTTCTGACCGCT--GGTATCTTGATGACAGGCGCTTTTTCCAGCCACTTCCA 491
Query 4052 TTCGCGTTCAGCAGCCCGGAGGAGTGCCTTAATGAATGAAAGGTGAGTTGCTTTTGTGGC 4111
|||||||| ||||| ||||| | ||||| || | | ||| || |||| |||||
Sbjct 490 GTCGCGTTCTGCAGCACGGAGAATGGCCTTTATCATGGCAAGATGCTTTGCCTTTGTCTG 431
Query 4112 TACTGCTGCCGGCTTAGGCTTGAATACTGGAGGCTGCTTCCCATTCTTCCTGCAAGCTTC 4171
|| | | ||||| || | | || || | | || || ||| | || || |
Sbjct 430 AGTTGATACTGGCTTTGGTTCATAAACAGGCAGTTCTTTACCTTTCCTGATGGCGGCCTG 371
Query 4172 ATCCATTAACTTCCAGTTTTCCTCATGCCGCCGATTAGTCA-TCTTCTGGATGGCGGAGT 4230
| | | ||||| |||| | | | ||| || ||| || | || ||||
Sbjct 370 AACTTTCTGTTTCCATATTTCTTTCGTCTTTCTGTTATGCATTCTGCT-TACAGCAGAGT 312
Query 4231 AAATCTTCGTCTCGGTAATATCCTTCAACTGCATCCCTGCAAAATGCTGGAGCCAGAATC 4290
||||||| | ||| | ||||| || | | || || ||||||| | ||||||||
Sbjct 311 AAATCTTTGCCTCCGAGATATCTTTAAGCCTTATACCCTCAAAATGTTCAAGCCAGAACT 252
Query 4291 CTATCCGACTCTTGTCATCATCCAGCGACTTCTTATGCGCCTTCTCCTCTAACCACCTGA 4350
| ||||| || || || ||| || || || |||| || || ||||| | ||| || |
Sbjct 251 CAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTA 192
Query 4351 CACAGGCCTCCTCAAAAGT 4369
|||||||| ||||||||
Sbjct 191 GGCAGGCCTCTTCAAAAGT 173
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 135615734277400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |