Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08] 165 sequences; 9,358,797 total letters Query= NC_031019.1 Length=41809 Score E Sequences producing significant alignments: (Bits) Value seq57 378 2e-100 >seq57 Length=4629 Score = 378 bits (418), Expect = 2e-100 Identities = 683/991 (69%), Gaps = 16/991 (2%) Strand=Plus/Minus Query 30732 TCCTTATTTTTACTGTGGGACATATTTGGGACAGAAGTACCAAAAATCGAGTCAATTTGT 30791 ||| || ||| | ||||||||||||||||||| | ||||||||| ||| |||| Sbjct 1146 TCCATAATTTCAGAGTGGGACATATTTGGGACATTATCACCAAAAATGTCGTCTATTTTC 1087 Query 30792 CGAGCATGTTCAGTCAGGTGATTTGGTGCCAGATGAGCATATCGGCGAACCATTTCGATA 30851 | ||||| || |||| ||||| || || || |||||||| | ||||||||||| || Sbjct 1086 CTCGCATGCTCTGTCAAATGATTAGGCGCAAGGTGAGCATACCTACGAACCATTTCTATG 1027 Query 30852 GACTCCCAGCCACCCATTTCCTGCAATACCGAAATCGGAACGCCAGCCTGAACTAACCAA 30911 |||||||| || ||||||||||| | || || | || ||||| | ||||| | ||| Sbjct 1026 GACTCCCATCCGCCCATTTCCTGAAGCACTGATAATGGGACGCCTGACTGAATCAGCCAG 967 Query 30912 CTTGCCCACGTGTGCCTCAGGTCATGAAAACGGAAGTCTTCAATGCCCGCTCGTTTTAAT 30971 |||||||| ||||| || |||||||| |||||||| |||||||| || || || | Sbjct 966 CTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCAATTCCTGCACGACGACAA 907 Query 30972 GCTGCCCTCCATGCAGTATTAGCGTCATAGCGCATCTTCCTCACTACAGGTGATTTAGTT 31031 |||| ||||| || || ||| |||||||||||| || |||| | | ||| Sbjct 906 GCTGATAGCCATGATGTCTTGCTGTCGATGCGCATCTTCCTGACCGCAGGCGTTGATGTT 847 Query 31032 CCGTCTGGTTTGGT-GCTGCTTTCCT-TGTAGACGAACACCCATTTGTGATGATTGCCGA 31089 || |||| | | || || || | |||| | ||||||||||||||||| ||||| | Sbjct 846 CCATCTGCTCGCTTAGCCGCCTTGGTATGTACA--AACACCCATTTGTGATGCTTGCCTA 789 Query 31090 TTTGCTTTTTCAGCACCCGGCAAGCGGTATCATTCAGCGCCACTCCAATGGCATGATTAG 31149 |||| | || ||| || |||||||| ||||||||||| |||||||| | || | Sbjct 788 TTTGATCACGCAACACTTTACAGGCGGTATCGTTCAGCGCCACACCAATGGCGCGGTTTG 729 Query 31150 ACTTGCTTTGTTCCGGGTGTATCCATGCCACCTTTCGTTGCATGTCTATCTGCTGCCACT 31209 | ||||| | ||| || | | ||| || || ||| |||||||| || || ||||| | Sbjct 728 ATTTGCTCTCTTCTGGATTCACCCAGGCAACTCGTCGCTGCATGTCGATTTGTTGCCATT 669 Query 31210 CCAGATTGATAATGTTAGACCGCCTTAAGCCAGTAGAAAGCGCAAACTCTACGACTGACT 31269 ||||||| || ||||| ||| || | ||||| | |||||||||| ||||| || | Sbjct 668 CCAGATTTATGATGTTCGACTTTCTCAGACCAGTTGCCAGCGCAAACTTGACGACAGATT 609 Query 31270 TTAGCGGTTCCTGGCATTCATCAATCAACCTTTTTGCCTCGTGAGGCTCAAGCCAGCGGA 31329 | || ||||| |||| |||||||| | | |||||| || | || ||||| | || Sbjct 608 TCAGTGGTTCGGGGCACTCATCAATAAGGCGTTTTGCTTCCTCCTTTTCCAGCCATCTGA 549 Query 31330 TACGCTTATTTTT--CGGCTGAGGAACTTTGATGATCGGAGCCTTATCCAGCATCTTCCA 31387 ||||| ||| | | ||| || | ||||||| || || || |||||| |||||| Sbjct 548 CTCGCTTGTTTCTGACCGCT--GGTATCTTGATGACAGGCGCTTTTTCCAGCCACTTCCA 491 Query 31388 TTCGCGTTCAGCAGCCCGGAGGAGTGCCTTAATGAATAAAAGGTGAGTTGCTTTTGTAGC 31447 |||||||| ||||| ||||| | ||||| || | ||| || |||| ||||| Sbjct 490 GTCGCGTTCTGCAGCACGGAGAATGGCCTTTATCATGGCAAGATGCTTTGCCTTTGTCTG 431 Query 31448 TACTGCTGCCGGCTTAGGCTTGAATACCGGAGGCTGCTTCCCATTCTTCCTGCAAGCTTC 31507 || | | ||||| || | | || || | | || || ||| | || || | Sbjct 430 AGTTGATACTGGCTTTGGTTCATAAACAGGCAGTTCTTTACCTTTCCTGATGGCGGCCTG 371 Query 31508 ATCCATTAACTTCCAGTTTTCCTCATGCCGCCGATTAGTTAT--CTTCTG--GATGGCGG 31563 | | | ||||| |||| | || | | ||||| ||||| | || | Sbjct 370 AACTTTCTGTTTCCATATTTC----TTTCGTCTTTCTGTTATGCATTCTGCTTACAGCAG 315 Query 31564 AGTAAATCTTCGTCTCGGTAATATCCTTCAACTGCATTCCTGCAAAATGCTGGAGCCAGA 31623 |||||||||| | ||| | ||||| || | | || || ||||||| | ||||||| Sbjct 314 AGTAAATCTTTGCCTCCGAGATATCTTTAAGCCTTATACCCTCAAAATGTTCAAGCCAGA 255 Query 31624 ATCCTATCCGACTCTTGTCATCATCCAGCGACTTCTTATGCGCCTTCTCCTCTAACCACC 31683 | | ||||| || || || ||| || || || |||| || || ||||| | ||| | Sbjct 254 ACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATC 195 Query 31684 TGACACAGGCCCCCTCAAAAGTCATGTCAGG 31714 | | |||||| | |||||||| | ||||| Sbjct 194 TTAGGCAGGCCTCTTCAAAAGTGACATCAGG 164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133666938095830