Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016455.1_202016-02-08]
151 sequences; 9,358,738 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq32 214 2e-50
seq28 113 6e-20
>seq32
Length=271156
Score = 214 bits (236), Expect = 2e-50
Identities = 682/1042 (65%), Gaps = 23/1042 (2%)
Strand=Plus/Minus
Query 111619 ACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGA 111678
|| || | ||||| || || ||||| || ||||| || || |||| ||| | || |
Sbjct 89601 ACTTGATTATGCGTGTTGCTATCGGCATTCATGGTGATGACATTGCAAGAGTTATTGAAA 89542
Query 111679 CATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCT 111737
| || || ||| | | |||| |||| || || | || || || || ||||||
Sbjct 89541 CTTATAACTTTATGAGTCAGAAGTAT-TTCACTCATGCCTCTCCTACTCTGTTTAACGCT 89483
Query 111738 GGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATC 111797
||||| || || |||||||| |||||| | |||| | ||| || |||||
Sbjct 89482 GGTACCCCTCACCCACAAATGTCATCATGTTTCTTAGTTGCCATGCGGGATGACTCAATT 89423
Query 111798 AATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATC 111857
| |||||||||| ||| | | |||||||| |||||| || |||||||| ||
Sbjct 89422 GAAGGCATTTACGATACTTTGAAGGAATGTGCTTTAATCTCCAAAACTGCTGGTGGAATT 89363
Query 111858 GGGATGCACATCCATGATGTCAGAGCCAACAAG-TCTCGTATTAGAGGTACAAATGGTCA 111916
|| ||||||| ||| || | | ||| ||| | || ||| ||||| || |||
Sbjct 89362 GGTTTGCACATTCATAATATTCGTGCC-ACAGGATCCTACATTGCTGGTACTAACGGTAC 89304
Query 111917 ATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCA 111976
|| ||||||||||||||||| | | || || ||| ||| || || ||||| ||||
Sbjct 89303 TTCGAATGGTATTATTCCAATGGTGAGGGTCTTCAACAACACTGCTCGTTATGTTGACCA 89244
Query 111977 AGCTGGGCGTCGCAAGGGATCTATCGCAGT--CTAT---CTT-GAGCCATGGCACGCGGA 112030
|| || || ||| | || ||| | || | ||| ||||||||||| || ||
Sbjct 89243 AGGTG---GTAACAAACGTCCTGGTGCATTTGCTTTGTACTTGGAGCCATGGCATGCCGA 89187
Query 112031 TATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC-CGCG 112089
||| | | ||| |||| | ||| ||||| ||| | ||||| | | | || | |
Sbjct 89186 CATCTTTGCCTTCATTGATATTCGTAAGAACCATGGTAAAGAGGA-GATCAGAGCTAGAG 89128
Query 112090 ATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCA 112149
| | ||| ||||| | ||||| || ||||| |||||||| ||||| || ||| ||||
Sbjct 89127 ACTTATTCCCCGCTTTGTGGATCCCTGATCTGTTCATGAAAAGAGTAGAACAGAATGGCG 89068
Query 112150 ATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGT 112209
||||| | || || | |||| | || || || || |||| | | || || || |
Sbjct 89067 ATTGGACCCTGTTCTCTCCAAGTGAAGCTCCTGGCCTTGCCGACGTCTATGGAGATGAAT 89008
Query 112210 TTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTG 112269
|||| | | ||| || ||||| | ||| |||| | | || | |||
Sbjct 89007 TTGAGGAATTGTACGAAAGATACGAAAAGGAAGGTCGTGGAAGACAAACCATCAAAGCCC 88948
Query 112270 CCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTT 112329
| | ||| | || || || || | ||||| || |||||||| |||| ||||| |
Sbjct 88947 AAAAGCTTTGGTACGCCATCCTTGAGGCACAAACAGAAACTGGTACTCCATTCATGCTGT 88888
Query 112330 ACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCA 112389
| || || || |||||| |||| | ||| || ||||| |||||||| || || || |
Sbjct 88887 ATAAGGATGCTTGTAACAAAAAAACTAACCAGAAGAACTTGGGTGTCATTAAATCCTCTA 88828
Query 112390 ACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCG 112449
|||| || ||||| | |||| | | || ||||| ||||| |||||| | |
Sbjct 88827 ACCTTTGCTGTGAAATTGTTGAATACTCTTCCCCGGAAGAGACTGCTGTCTGTAACTTGG 88768
Query 112450 CATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGACATTTG-----ATTATG 112503
| || || ||||| || | ||| || | || || | || || | | ||
Sbjct 88767 CTTCTATTGCTCTTCCAGCCTTTGTTGAAACCGATGATACTCACTGCTGGTACAACTTTG 88708
Query 112504 AAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAA 112563
|||| || || ||| | || ||| || || ||| | |||||| |||| || ||||
Sbjct 88707 AAAAGCTGCATGAAATCACCAAAGTGGTTACTCGTAACTTGAACAGAATTATCGACAGAA 88648
Query 112564 ATTTTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTC 112622
|||||||||||||| ||| ||| | | ||| |||||| | | | || || | | |
Sbjct 88647 ATTTTTACCCCGTTCCAGA-AGCTAGGAGATCGAATATGCGTAATAGACCTATAGCTGTG 88589
Query 112623 GGTGTCCAAGGTCTCGCGGATG 112644
||||| |||||| | || ||||
Sbjct 88588 GGTGTTCAAGGTTTAGCTGATG 88567
>seq28
Length=426132
Score = 113 bits (124), Expect = 6e-20
Identities = 349/524 (67%), Gaps = 22/524 (4%)
Strand=Plus/Minus
Query 102099 GCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT 102158
|||||| | || |||||||||| || | || || || ||||| |||| ||| || |
Sbjct 106502 GCCATCGAGACCATTCCATGTATCAAAGAAAAGGCTGACTGGGCCATGAGATGGATTTCT 106443
Query 102159 -ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTT 102217
| | | || || || ||||| || | | || || || |||||||||||||||
Sbjct 106442 GATGACGATGCATTG-TTCGCTGAACGTTTGGTTGCCTTCGCTGCTGTTGAGGGTATCTT 106384
Query 102218 CTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTC 102276
||| || || || || ||| |||| | ||| | |||||| |||||||||||||||||
Sbjct 106383 CTTTTCAGGATCTTT-TGCTTCTATCTTCTGGTTGAAGAAGAGAGGTCTCATGCCAGGTT 106325
Query 102277 TCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC--GGT 102334
| ||||||||| |||||||| | | ||||||||| | ||| || ||||| | |
Sbjct 106324 TGACCTTCTCCAATGAGCTTATTTGCAGAGACGAGGGATTACACACTGACTTTGCTTGCT 106265
Query 102335 GGAACTTTTCAAATTATTGCGTATTAAACCAACGACTGAGACTATTCATTCTATTGTTAA 102394
| ||||| ||| | || | ||| || || | || | ||| | |
Sbjct 106264 TGCTATTTTCTCATT-TAAACAATAGAGCCAGTGA-GGAAATCGTTGAAAAGATTATCAC 106207
Query 102395 GGAAGCCGTTGAGATTG--AGAAGGGA-TTCATATTGGATGCCCTTCCATGCGCTCTCAT 102451
|| || || ||||| | | |||| | |||| | || || ||||| | | | |
Sbjct 106206 AGAGGCTGTCGAGATCGAAAAAAGGTACTTCACA---GACGCTCTTCCTGTCTCCTTACT 106150
Query 102452 CGGTATGAATTCTGAA--AAGATGTCCGAATATATTGAGTATGTATCTGATAGATTGTTG 102509
|| ||||| ||| | ||||| | | ||| |||||| || |||| ||| | ||
Sbjct 106149 GGGGATGAA--CTGCAGCTTGATGTGCCAGTATGTTGAGTTCGTTGCTGACAGACTACTG 106092
Query 102510 AAGCAGATCGGGGTGCCTCCAA--TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGA 102567
| || || ||| | || | | ||| ||| ||||||||||||||||||||||
Sbjct 106091 --GTAGCTCTGGGCAACAAAAAGGTGTACAACGTCAACAATCCATTTGACTTCATGGAGA 106034
Query 102568 ACATTAGCCTCGACGGGAAGACAAACTTCTTCGAAAAGAGGGTT 102611
||||| | | ||| || || ||||||||||||||||| |||
Sbjct 106033 ACATTTCTTTGGCCGGTAAAACCAACTTCTTCGAAAAGAGAGTT 105990
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620741228348720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |