Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016455.1_202016-02-08] 151 sequences; 9,358,738 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq32 248 2e-60 seq4 89.7 1e-12 >seq32 Length=271156 Score = 248 bits (274), Expect = 2e-60 Identities = 539/801 (67%), Gaps = 7/801 (1%) Strand=Plus/Minus Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 ||||||||||||||| || || | |||||||| || || |||||||| |||| ||| | Sbjct 89614 GAACGTCCTCAACACTTGATTATGCGTGTTGCTATCGGCATTCATGGTGATGACATTGCA 89555 Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483 ||||||||| |||| | | | ||| | ||| | | |||||| ||||||| Sbjct 89554 AGAGTTATTGAAACTTATAACTTTATGAGTCAGAAGTATTTCACTCATGCCTCTCCTACT 89495 Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAATTAA 110542 || |||||||| || || | |||| || | || || |||||| | | || Sbjct 89494 CTGTTTAACGCTGGTACCCCTCACCCACAAATGTCATCATG-TTTCTTAGTTGCCATGCG 89436 Query 110543 CGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAA 110602 ||||| || |||||||| ||||| ||| || | || ||| |||| | || || |||| Sbjct 89435 GGATGACTCAATTGAAGGCATTTACGATACTTTGAAGGAATGTGCTTTAATCTCCAAAAC 89376 Query 110603 CTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAAC 110662 |||| ||||||||| | ||| ||||| ||||||| | | |||| | | || || Sbjct 89375 TGCTGGTGGAATTGGTTTGCACATTCATAATATTCGTGCCACAGGATCCTACATTGCTGG 89316 Query 110663 AGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAA 110722 | || ||| |||| | ||| || |||||||| | || ||||||||| ||||||| Sbjct 89315 TACTAACGGTACTTCGAATGGTATTATTCCAATGGTGAGGGTCTTCAACAACACTGCTCG 89256 Query 110723 ATATGTGAATCAAGGTGGTAAGA---GAAATGGCTCATTTGCTATCTATCTCGAACCTTG 110779 ||||| | ||||||||||| | | ||| |||||||| | || | || || || Sbjct 89255 TTATGTTGACCAAGGTGGTAACAAACGTCCTGGTGCATTTGCTTTGTACTTGGAGCCATG 89196 Query 110780 GCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAG 110839 |||| | || || |||| ||| | || ||||||| || || || || || || Sbjct 89195 GCATGCCGACATCTTTGCCTTCATTGATATTCGTAAGAACCATGGTAAAGAGGAGATCAG 89136 Query 110840 AGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGA 110899 ||| | || ||||| || ||||||| | ||| | ||||||||| | || || | Sbjct 89135 AGCTAGAGACTTATTCCCCGCTTTGTGGATCCCTGATCTGTTCATGAAAAGAGTAGAACA 89076 Query 110900 AAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGG 110959 |||||| ||| | || | | ||| | ||||||| || | || || ||||| Sbjct 89075 GAATGGCGATTGGACCCTGTTCTCTCCAAGTGAAGCTCCTGGCCTTGCCGACGTCTATGG 89016 Query 110960 AAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGG-CAAGTTTCGCAAACAAA 111018 | | || ||||| || | ||||||| ||| ||||| ||||| | | ||||| | Sbjct 89015 AGATGAATTTGAGGAATTGTACGAAAGATACGAAAAGGAAGGTCGTGGAAGACAAAC-CA 88957 Query 111019 TTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTT 111078 | ||| ||| | ||||||| | |||||||| ||||| |||||||| ||||| | Sbjct 88956 TCAAAGCCCAAAAGCTTTGGTACGCCATCCTTGAGGCACAAACAGAAACTGGTACTCCAT 88897 Query 111079 ATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTA 111138 || ||||||| ||| | ||| ||| |||| || | ||| || || |||| Sbjct 88896 TCATGCTGTATAAGGATGCTTGTAACAAAAAAACTAACCAGAAGAACTTGGGTGTCATTA 88837 Query 111139 AGTCTAGTAATTTGTGCTGTG 111159 | || ||| | ||||||| Sbjct 88836 AATCCTCTAACCTTTGCTGTG 88816 >seq4 Length=489148 Score = 89.7 bits (98), Expect = 1e-12 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 305306 AGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATG 305365 ||||| ||| || ||||| || || || || | ||||| ||| | ||||||||| Sbjct 376030 AGACACCTGATGGATGATGATCCTGTCCTTTTTAACCGTCAACCGTCATTACATAAAATG 375971 Query 305366 TCTATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAATGTAAGT 305425 || |||||||| |||| |||||||||| | | | || ||| || ||||| || | Sbjct 375970 TCCATGATGGCACATAGAGTCAAAGTAATGCCCTACTCTACTTTTAGACTAAATTTATCT 375911 Query 305426 GCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAA 305485 | | | || || ||||| ||||| || || |||||||||||| | || || || ||| Sbjct 375910 GTTACATCACCGTACAATGCTGATTTCGACGGTGATGAAATGAATTTACACGTTCCACAA 375851 Query 305486 TC 305487 || Sbjct 375850 TC 375849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186810503888111