Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016455.1_202016-02-08] 151 sequences; 9,358,738 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq32 327 2e-84 seq28 212 9e-50 >seq32 Length=271156 Score = 327 bits (362), Expect = 2e-84 Identities = 1221/1901 (64%), Gaps = 41/1901 (2%) Strand=Plus/Plus Query 68363 CCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATAC 68422 |||| || | |||||||||||||| | | || | || ||||| || |||||||||| Sbjct 87835 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 87894 Query 68423 CGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTG 68482 | || || | ||| |||| || || || |||||||| || | ||| | ||| Sbjct 87895 CAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTG 87954 Query 68483 GATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCG 68542 || | | ||||| |||| ||| ||| ||||||||| | ||| |||||| || | Sbjct 87955 GAGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAG 88014 Query 68543 CCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATAT 68602 |||| | |||||| ||||||||| ||| ||||||| |||||| ||| ||| | | Sbjct 88015 CCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTT 88074 Query 68603 CATCTGGAAGGCTCGT---ATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGA 68659 || || | | | | ||||||||| || || || || || || ||| || | Sbjct 88075 GCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCA 88134 Query 68660 TCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTT 68719 | | ||| | ||| | ||| || | | | | | | |||||||| |||| Sbjct 88135 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 88194 Query 68720 GAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATT 68779 ||||||| |||| ||| || | || | ||| || || || || ||||| | | | | Sbjct 88195 GAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACT 88254 Query 68780 CATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTAT 68839 | || | ||||||||||| | |||||| ||||| ||||||||||| || | || | Sbjct 88255 CGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGT 88314 Query 68840 TTCTAAGACCATGTGTTATGATT-TTATCTTTTAGATGTTTCCAATCCCAAAGATCAGAT 68898 |||| | ||| |||| | | | || |||| || || ||| ||||| || ||||| Sbjct 88315 TTCTTAAACC-TGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAG 88373 Query 68899 GGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATAT 68958 || | ||| | || ||||| | ||| || | | ||| || || | | Sbjct 88374 GGCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGAAG 88433 Query 68959 GTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAA 69018 ||||| || | |||||| | | |||| ||| || || || || | | || Sbjct 88434 GTTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAG 88493 Query 69019 ATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGT 69078 || ||||| ||||||| |||| || | || |||||| || ||| || ||| | | | Sbjct 88494 ATAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGA-ATTCT 88552 Query 69079 AAAAGA-ATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTT 69137 || ||||| ||||| || || || ||||| || | | | |||||||||| | | | Sbjct 88553 CAACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCAT 88612 Query 69138 ATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATT 69197 ||| || || ||||||||||| || ||| |||| | || |||||| | || | || Sbjct 88613 ATTCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTT 88672 Query 69198 TCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCATCTATAAC 69257 || || ||||| | || | || || ||| | | | | | || | Sbjct 88673 ACGAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGAGTATC 88732 Query 69258 A--------AACATATTC----AGTGCTACAGATGCTAGATTACAAACTGCTACCTCATT 69305 | |||| | | || || | ||| || | ||||| || || ||| | Sbjct 88733 ATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTC 88792 Query 69306 AGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATT 69365 | | |||| | || || || || ||| |||| || |||| || Sbjct 88793 CGGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTT 88852 Query 69366 TTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTC 69425 | ||| ||| | ||||||||||| || ||||| || || || || |||||||||||||| Sbjct 88853 CTTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTC 88912 Query 69426 AATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTA--- 69482 | || | || | || | | ||||| || || || ||| |||| Sbjct 88913 TGTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT---GGT-TTGTCTTC 88968 Query 69483 -ACGCTTCTCTTTTTCATATTGT--GTATATAGCCGTTCGAATTCATCTCCCCAAACATC 69539 ||| || ||||| ||| | ||| | || || ||||||||||| | || || Sbjct 88969 CACGACCTTCCTTTTCGTATCTTTCGTACAATTCC--TCAAATTCATCTCCATAGACGTC 89026 Query 69540 ATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCG 69599 | | |||||| |||| ||||| | | || | ||| | ||| | | |||| Sbjct 89027 GGCAAGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCT 89086 Query 69600 TTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTC 69659 |||||| || ||||| || ||||| | ||| || | ||||| | ||| | || || Sbjct 89087 TTTCATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTC 89146 Query 69660 ATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAG 69719 || || || || || ||| | || | | || || | ||||||||| || | Sbjct 89147 TTTACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAA 89206 Query 69720 ATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTT 69779 || | || | | || || ||||| || || || || || | || | |||||||| Sbjct 89207 GTACAAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTT 89266 Query 69780 ATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATA 69839 || |||| |||| ||| |||||||||||||| || |||| || || |||| ||| || Sbjct 89267 GTTGAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTA 89326 Query 69840 ACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGAT 69899 |||| | || ||||||||| ||| | ||| ||||| || || |||| ||||| Sbjct 89327 GGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGAT 89386 Query 69900 TAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAG 69959 || |||||| ||||| || || || || || || || ||||| |||| || Sbjct 89387 TAAAGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAAC 89446 Query 69960 AAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGC 70019 | ||||| |||||||| | || || || || ||||| | |||||||| || Sbjct 89447 TAAGAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGC 89506 Query 70020 GTGAGTGAACCATTT----TTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATAT 70075 |||||||| | || ||| |||| || || ||||||||| || | | || | Sbjct 89507 ATGAGTGAAATACTTCTGACTCATAAAG----TTATAAGTTTCAATAACTCTTGCAATGT 89562 Query 70076 C-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTT 70134 | ||| |||||| || || || |||||||| | || || ||||| |||||| | Sbjct 89563 CATCAC-CATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACA 89621 Query 70135 TTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTAT 70194 ||| ||| ||| ||| ||||| ||| |||||| || || || ||||| ||||| || Sbjct 89622 TTACCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATAC 89681 Query 70195 GAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATC 70235 ||||||||| ||||| | |||| |||| || || | ||| Sbjct 89682 TGAAAGTCTCTATCGTAGACAATAGCAGAGTTCAGCTCATC 89722 >seq28 Length=426132 Score = 212 bits (234), Expect = 9e-50 Identities = 565/854 (66%), Gaps = 12/854 (1%) Strand=Plus/Plus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 |||||||| ||| ||| | || ||||| || || ||||| || |||| || || || Sbjct 105976 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 106035 Query 39386 TCCATGAAATCAAACGGATTAGTTG-CATTATAtttttttttAAATCCTAATTCTGAAAT 39444 |||||||| ||||| ||||| |||| | || || ||||| || | || | Sbjct 106036 TCCATGAAGTCAAATGGATT-GTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAG 106094 Query 39445 CAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAG 39504 | ||| || ||||| || || | || ||||| || ||||| || | | Sbjct 106095 TAGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAA 106154 Query 39505 TTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTAT 39564 || || ||||| || || | || ||||||||| || || |||||||| || || Sbjct 106155 GGAGACAGGAAGAGCGTCTGTGAAGTACCTTTTTTCGATCTCGACAGCCTCTGTGATAAT 106214 Query 39565 CGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAA 39624 | | || | || ||||| | | || |||||| ||| | ||||| || || Sbjct 106215 CTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAAA 106274 Query 39625 GTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCAT 39684 |||| |||| ||||| ||||| | ||| | || || || || || | || ||||| Sbjct 106275 GTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCAT 106334 Query 39685 TAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTC 39744 ||||| | ||| || | ||| || || | |||||||||||| ||||||||||| || || Sbjct 106335 GAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCTC 106394 Query 39745 TACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTA---TCATTATGTATCCACTT 39801 || || || || ||||| | | || || | || | |||| | ||||| | Sbjct 106395 AACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATCT 106454 Query 39802 CTGTGCCCAATCAGCTTTCTTCTTT-ACACAAGGCATTGTTTCTATAGCATTAAAGAGAT 39860 | ||||| ||||| || |||||| | ||| || || || || || ||||| || || Sbjct 106455 CATGGCCCAGTCAGCCTT-TTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGGA 106513 Query 39861 AATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAAT 39920 | | || | |||||| | || ||||| || | || || | || || | Sbjct 106514 ATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTAAGTCTCGGAGT 106573 Query 39921 GGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCT 39980 | ||||| || ||| ||||| || |||||||| ||| ||||||| | || ||| |||| Sbjct 106574 GAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAACCT 106633 Query 39981 CTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATG 40040 | | || || ||||| |||| |||||||| || || || ||| || ||||| || | Sbjct 106634 CAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGAAGG 106693 Query 40041 CCAATACATGTTTA-ATAAAATATTTTTC---ATCGGGTGTCAATTTATTCCAGTCATTG 40096 | | || | | | || || ||||||| |||| | ||||||||||||| Sbjct 106694 CAAGGAC-TCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCATGC 106752 Query 40097 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTAC 40156 | ||| || | |||| ||| ||||| |||||||| || || || |||| |||||| Sbjct 106753 AAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGTAC 106812 Query 40157 ATGTTCCATATATC 40170 || | ||| ||||| Sbjct 106813 ATTTGCCAGATATC 106826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686907503459640