Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016455.1_202016-02-08]
151 sequences; 9,358,738 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq28 183 3e-41
>seq28
Length=426132
Score = 183 bits (202), Expect = 3e-41
Identities = 544/833 (65%), Gaps = 11/833 (1%)
Strand=Plus/Plus
Query 23240 TTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTA- 23298
||||||| || || || ||||| | || || || || ||||| || |||||||||||
Sbjct 105998 TTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTCTCCATGAAGTCAAATGGATTGT 106057
Query 23299 -GAAGTATTATATACAGCTTTACAT-GATAATTCCTTTAAA-AGCCTATCTGCTACAAAT 23355
|| || | |||| |||| | | | || | || || || || || ||
Sbjct 106058 TGACGT----TGTACACCTTTTTGTTGCCCAGAGCTACCAGTAGTCTGTCAGCAACGAAC 106113
Query 23356 TCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCA 23415
|||| ||| || |||||||| |||| || || | || || |||| || ||
Sbjct 106114 TCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAGGAGACAGGAAGAGCGTCT 106173
Query 23416 TATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAACAATAACTTCTTCA 23475
||| | |||||| || ||||| ||| | || || | ||| | ||| |||
Sbjct 106174 GTGAAGTACCTTTTTTCGATCTCGACAGCCTCTGTGATAATCTTTTCAACGATTTCCTCA 106233
Query 23476 CTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCA 23535
|| | | || ||||||| ||| | || || ||||| ||| |||| || ||
Sbjct 106234 CTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAAAGTCAGTGTGTAATCCCTCG 106293
Query 23536 TCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATC 23595
|| || | ||| | ||||| || || || || |||||||| | |||| || || | |
Sbjct 106294 TCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCATGAGACCTCTCTTCTTCAAC 106353
Query 23596 CAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACA 23655
|| || || | |||||| ||||| |||||||| |||||||||||||| || ||||| ||
Sbjct 106354 CAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCTCAACAGCAGCGAAGGCAACC 106413
Query 23656 AGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTC 23715
| |||| | | || ||||| | ||||||||||||| | | | ||| | ||||||
Sbjct 106414 AAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATCTCATGGCCCAGTCAGCCTTT 106473
Query 23716 AATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCT 23775
||| | ||| ||| || || || || || || || || |||| ||||
Sbjct 106474 TCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGGAATTCAGACTCTTTTGGATCT 106533
Query 23776 GTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATC 23835
| || || |||||||| || || || | || || ||||| || || || |||
Sbjct 106534 TTGATGTAAGTATCAATCAGCAAGGAGTAAGTCTCGGAGTGAATGTTCTCCATCATGATC 106593
Query 23836 TGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCT 23895
|| || || ||||| ||| | ||||| | | |||||| ||| | || ||| |
Sbjct 106594 TGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAACCTCAGCACTGAAATTTTCCACC 106653
Query 23896 AAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAA 23955
|| ||||| || |||||||| ||| ||||||||||| ||||| || || ||
Sbjct 106654 AAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGAAGGCAAGGACTCTCGAGATGAAG 106713
Query 23956 TGTCTTTCATCA--GTTGATA-ATTTTTTCCAATCATTAATATCTTTTGATAAATCAACT 24012
| |||||| | ||| ||| || ||||| |||| | ||| || | || | |
Sbjct 106714 AATTTTTCATTATCGTTCATACGATTATTCCAGTCATGCAAATCCTTACCCAGGTCTATT 106773
Query 24013 TCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATC 24065
|| ||| | |||||||| || ||| |||| |||||| |||| |||||
Sbjct 106774 TCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGTACATTTGCCAGATATC 106826
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521487015691400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |