Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016455.1_202016-02-08] 151 sequences; 9,358,738 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq28 183 3e-41 >seq28 Length=426132 Score = 183 bits (202), Expect = 3e-41 Identities = 544/833 (65%), Gaps = 11/833 (1%) Strand=Plus/Plus Query 23240 TTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTA- 23298 ||||||| || || || ||||| | || || || || ||||| || ||||||||||| Sbjct 105998 TTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTCTCCATGAAGTCAAATGGATTGT 106057 Query 23299 -GAAGTATTATATACAGCTTTACAT-GATAATTCCTTTAAA-AGCCTATCTGCTACAAAT 23355 || || | |||| |||| | | | || | || || || || || || Sbjct 106058 TGACGT----TGTACACCTTTTTGTTGCCCAGAGCTACCAGTAGTCTGTCAGCAACGAAC 106113 Query 23356 TCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCA 23415 |||| ||| || |||||||| |||| || || | || || |||| || || Sbjct 106114 TCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAGGAGACAGGAAGAGCGTCT 106173 Query 23416 TATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAACAATAACTTCTTCA 23475 ||| | |||||| || ||||| ||| | || || | ||| | ||| ||| Sbjct 106174 GTGAAGTACCTTTTTTCGATCTCGACAGCCTCTGTGATAATCTTTTCAACGATTTCCTCA 106233 Query 23476 CTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCA 23535 || | | || ||||||| ||| | || || ||||| ||| |||| || || Sbjct 106234 CTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAAAGTCAGTGTGTAATCCCTCG 106293 Query 23536 TCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATC 23595 || || | ||| | ||||| || || || || |||||||| | |||| || || | | Sbjct 106294 TCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCATGAGACCTCTCTTCTTCAAC 106353 Query 23596 CAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACA 23655 || || || | |||||| ||||| |||||||| |||||||||||||| || ||||| || Sbjct 106354 CAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCTCAACAGCAGCGAAGGCAACC 106413 Query 23656 AGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTC 23715 | |||| | | || ||||| | ||||||||||||| | | | ||| | |||||| Sbjct 106414 AAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATCTCATGGCCCAGTCAGCCTTT 106473 Query 23716 AATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCT 23775 ||| | ||| ||| || || || || || || || || |||| |||| Sbjct 106474 TCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGGAATTCAGACTCTTTTGGATCT 106533 Query 23776 GTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATC 23835 | || || |||||||| || || || | || || ||||| || || || ||| Sbjct 106534 TTGATGTAAGTATCAATCAGCAAGGAGTAAGTCTCGGAGTGAATGTTCTCCATCATGATC 106593 Query 23836 TGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCT 23895 || || || ||||| ||| | ||||| | | |||||| ||| | || ||| | Sbjct 106594 TGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAACCTCAGCACTGAAATTTTCCACC 106653 Query 23896 AAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAA 23955 || ||||| || |||||||| ||| ||||||||||| ||||| || || || Sbjct 106654 AAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGAAGGCAAGGACTCTCGAGATGAAG 106713 Query 23956 TGTCTTTCATCA--GTTGATA-ATTTTTTCCAATCATTAATATCTTTTGATAAATCAACT 24012 | |||||| | ||| ||| || ||||| |||| | ||| || | || | | Sbjct 106714 AATTTTTCATTATCGTTCATACGATTATTCCAGTCATGCAAATCCTTACCCAGGTCTATT 106773 Query 24013 TCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATC 24065 || ||| | |||||||| || ||| |||| |||||| |||| ||||| Sbjct 106774 TCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGTACATTTGCCAGATATC 106826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487015691400