Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016475.1_202016-02-08]
166 sequences; 9,367,240 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq22 136 8e-27
seq24 98.7 2e-15
>seq22
Length=546675
Score = 136 bits (150), Expect = 8e-27
Identities = 313/467 (67%), Gaps = 17/467 (4%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|||||||| ||||| ||||| || ||||||||| || | || || || || ||||||
Sbjct 330276 GTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTTTCAGGATCTTTTGCTTCTATCTTCTGG 330335
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| ||||| || ||| | |||| ||| | |||| |||||||||| | |||| || |||
Sbjct 330336 TTGAAGAAGAGAGGTCTCATGCCAGGTTTGACCTTCTCCAATGAGCTTATTTGCAGAGAC 330395
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097
|| || | || |||||||| ||| |||| || | | || | || |
Sbjct 330396 GAGGGATTACACACTGACTTTGCTTGCTTGCTATTT--------TCTCATTTAAACA--A 330445
Query 102098 TCAAG--AGAAAGGAT-TC-TTGAAA---TTGTCACTGAAGCCGTCCGAATTGAACAAGA 102150
| || || |||| || |||||| || |||| || || ||| || ||| ||
Sbjct 330446 TAGAGCCAGTGAGGAAATCGTTGAAAAGATTATCACAGAGGCTGTCGAGATCGAAAAAAG 330505
Query 102151 ATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCA 102210
| |||||| | || ||||| ||| |||| |||||||||| |||||| ||||
Sbjct 330506 GTACTTCACAGACGCTCTTCCTGTCTCCTTACTGGGGATGAACTGCAGCTTGATGTGCCA 330565
Query 102211 GTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAA 102270
||| |||| || || || || | |||| |||| | |||| ||||| || ||
Sbjct 330566 GTATGTTGAGTTCGTTGCTGACAGACTACTGGTAGCTCTGGGCAACAAAAAGGTGTACAA 330625
Query 102271 TGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTT 102330
|| | ||| || || |||||||| || ||||| | | ||| |||||||| ||
Sbjct 330626 CGTCAACAATCCATTTGACTTCATGGAGAACATTTCTTTGGCCGGTAAAACCAACTTCTT 330685
Query 102331 TGAAAAGAGAGTCGCCGAGTATCAACGTGCCCAGGTCATGGCTTCTA 102377
||||||||||| | || || ||| || |||||||||||||
Sbjct 330686 CGAAAAGAGAGTTTCTGATTACCAAAAGGCAGGTGTCATGGCTTCTA 330732
>seq24
Length=401274
Score = 98.7 bits (108), Expect = 2e-15
Identities = 186/271 (69%), Gaps = 2/271 (1%)
Strand=Plus/Plus
Query 94770 ATCATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAG 94829
|| ||||| ||| | || | ||| |||||||| |||||||| | || ||||| |
Sbjct 219463 ATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGCACATTCCTTCAA 219522
Query 94830 AGTATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAG 94889
|||||| ||||| || ||||| ||||| | | | | | | ||| || || || |
Sbjct 219523 AGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAAACATGATGACAT 219582
Query 94890 TTGGGGTGTGACTGTT-CCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCC 94948
||| || |||| | | ||| |||||||| || || || ||||| || ||||| | |
Sbjct 219583 TTGTGG-GTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGTGAAATACTTCT 219641
Query 94949 TCGACATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAG 95008
||| | | ||| |||||||| || | ||||| || |||||||||| ||
Sbjct 219642 GACTCATAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACCATGAATGCCGATAG 219701
Query 95009 CCACACGCATAATCATGTCCTGAGGGCGCTC 95039
| ||||||||||||| || ||||| || ||
Sbjct 219702 CAACACGCATAATCAAGTGTTGAGGACGTTC 219732
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989581895278530
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |