Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016475.1_202016-02-08] 166 sequences; 9,367,240 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq24 311 1e-79 seq22 170 2e-37 >seq24 Length=401274 Score = 311 bits (344), Expect = 1e-79 Identities = 1211/1903 (64%), Gaps = 45/1903 (2%) Strand=Plus/Plus Query 62035 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 62094 ||||||| | ||| || ||||||| ||| | || | || ||||| || |||||||| | Sbjct 217953 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 218012 Query 62095 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCG 62154 | || |||| || |||| || ||||| |||||||| || | ||| | | | Sbjct 218013 CAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTG 218072 Query 62155 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 62214 || | | || || |||| || ||| ||||||||| ||||| || || |||| Sbjct 218073 GAGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAG 218132 Query 62215 CCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 62274 |||| | || || |||||||| | ||| ||||||| ||| || |||| | |||| | Sbjct 218133 CCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTT 218192 Query 62275 CTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGA 62331 || || | ||| | ||| ||||| || || ||| || || ||| || | Sbjct 218193 GCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCA 218252 Query 62332 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTT 62391 | | ||| | ||| | || || | | | | | | || ||||| | || Sbjct 218253 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 218312 Query 62392 GGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACT 62451 | |||||||||| ||||| | || | ||| || || || || ||||| | ||| Sbjct 218313 GAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACT 218372 Query 62452 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 62511 | || | |||| |||||| | |||||| ||||| ||||||||||| || | || | Sbjct 218373 CGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGT 218432 Query 62512 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACG 62571 |||| | ||| | || || |||| || |||||| | ||| || || || | Sbjct 218433 TTCTTAAACCTGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAGG 218492 Query 62572 G-------TACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCT 62624 | | | ||| |||||| | ||| || | | || || ||| Sbjct 218493 GCTTCTTGTCCCACAAGTC-------ATATTGCAAAATGCCCTGAGATGCTGGAGAACCT 218545 Query 62625 ACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCG 62684 | || || || | |||||| | | |||| || || || || || | Sbjct 218546 TGGAAGGTTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCA 218605 Query 62685 TAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGA 62744 | || || |||||||| |||| |||| || | || ||||| || |||||| ||| Sbjct 218606 TGGTAGATAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGA 218665 Query 62745 TAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGT 62804 | || ||||| || || ||||| ||||||||||| | | | |||||||||| Sbjct 218666 ATTCTCAACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTA 218725 Query 62805 CTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTG 62864 | | |||| || | ||||||||||| || ||| |||| | || |||||| | || Sbjct 218726 CGCATATTCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTC 218785 Query 62865 AGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCC----- 62919 | || | || |||||| | || | ||| || ||| | | | | Sbjct 218786 AAGTTACGAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGA 218845 Query 62920 ----CATCTATTACAAACATG--TTCAAT-GCAACAGATGCCAGATTACACACGGCTACC 62972 |||| || ||| | | | || |||| ||| |||| ||||| || || | Sbjct 218846 GTATCATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTC 218905 Query 62973 TCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCT 63032 || | | | |||| | || ||| |||||| ||| | || || || Sbjct 218906 TCTTCCGGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCC 218965 Query 63033 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCA 63092 || || | || ||| | ||||||||||| ||||||||||| || ||||||||||||||| Sbjct 218966 AAGTTCTTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCA 219025 Query 63093 GTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTG 63152 ||||| | || | || | || || | ||| | | | || || || | |||| Sbjct 219026 GTTTCTGTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT----GGTTTG 219081 Query 63153 TATCTC----CTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAAC 63208 | | | | ||| |||||||| |||||| || || || ||||| | || Sbjct 219082 TCTTCCACGACCTTCCTTTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGAC 219141 Query 63209 ATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCAC 63268 | | | | | |||| |||| ||| | | || | ||| || || | | | || Sbjct 219142 GTCGGCAAGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTAC 219201 Query 63269 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTC 63328 || |||||| || |||||||| ||||| | ||| |||| ||||| | ||| || Sbjct 219202 TCTTTTCATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTC 219261 Query 63329 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 63388 ||| || || ||||| || ||| | ||| || | || || | |||||| || || Sbjct 219262 CTCTTTACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTC 219321 Query 63389 CAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 63448 |||||| | || | | ||||| |||||||| || || || || | || | ||| || Sbjct 219322 CAAGTACAAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGT 219381 Query 63449 GTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGAT 63508 ||| || | || |||| ||||||||||||||| || || |||| || ||||| | || Sbjct 219382 GTTGTTGAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAAT 219441 Query 63509 ATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGA 63568 ||| ||| |||||||||||||| ||| | ||| ||||| || || |||| || Sbjct 219442 GTAGGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGA 219501 Query 63569 GATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTT 63628 |||||| || ||| || || || || || |||||||| || ||||| |||| Sbjct 219502 GATTAAAGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGC 219561 Query 63629 AAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGA 63688 || || ||||| |||||||| | ||| || || || ||||| | |||||||| Sbjct 219562 AACTAAGAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGA 219621 Query 63689 AGCGTGCGTAAACCATTT----TTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTA 63744 || || || || | || ||| |||| || || || |||||| || | | Sbjct 219622 GGCATGAGTGAAATACTTCTGACTCATAAAG----TTATAAGTTTCAATAACTCTTGCAA 219677 Query 63745 TATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAA 63804 | || |||||| || | || |||||||| | || ||| ||||| | ||| ||| Sbjct 219678 TGTCATCACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAA 219737 Query 63805 TTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 63864 || || ||| ||| | ||| ||| ||||||| || || || ||||| ||||| | Sbjct 219738 CATTACCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTAT 219797 Query 63865 ATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATC 63907 | |||||||| ||||| | |||| | || || |||| ||| Sbjct 219798 ACTGAAAGTCTCTATCGTAGACAATAGCAGAGTTCAGCTCATC 219840 >seq22 Length=546675 Score = 170 bits (188), Expect = 2e-37 Identities = 574/882 (65%), Gaps = 14/882 (2%) Strand=Plus/Minus Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350 |||||||| ||| || | |||||||| || || ||||| || |||| || || || Sbjct 330712 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 330653 Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410 |||||||| ||||| |||||| | || ||||| | ||||| |||| | | Sbjct 330652 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 330593 Query 33411 AATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGT 33470 | ||| || || ||||| || | ||| ||||| || ||||| || | | Sbjct 330592 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 330533 Query 33471 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAAT 33529 || |||||||| | || ||| | | || ||| || || || | ||| ||||| Sbjct 330532 GAGACAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAAT 330474 Query 33530 AAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAA 33589 | |||| |||| ||||| | | || |||||| ||| | ||| || || || Sbjct 330473 CTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAAA 330414 Query 33590 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCAT 33649 || ||| | ||||||||||| | ||| | || || || || || | || ||||| Sbjct 330413 GTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCAT 330354 Query 33650 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTC 33709 || || | ||| || | ||| || || ||||| || ||||| ||||||||||| || || Sbjct 330353 GAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCTC 330294 Query 33710 TACTGCAGCAAAGGCAATAAGTCTCTCTCC--ATAA-CCGGCGCTGTCATGTATCCA-CT 33765 || ||||| ||||||| | | || | | || | || ||| ||||| || Sbjct 330293 AACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATCT 330234 Query 33766 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33825 || ||||| || ||||| | ||| | ||| || || || || |||||||| || || Sbjct 330233 CATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGGA 330175 Query 33826 AGtttttttCATTACTATCTTTAACATAAGTATCGATCA--AAAGACTATACATTTCCGA 33883 | | || || |||||| | |||||||| |||| || || || | || || Sbjct 330174 ATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGA--GTAAGTCTCGGA 330117 Query 33884 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCAC 33943 |||||||| || || ||||| || ||||| || ||| | || |||| || || || Sbjct 330116 GTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAAC 330057 Query 33944 TTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAA 34003 || | || || ||| | || |||||||| || || || ||| ||| ||||| || Sbjct 330056 CTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGAA 329997 Query 34004 CGCCAATACATGTTTTATAAAATATTTTTC-GTCTGGT--GTTAGTTTATTCCAATCATT 34060 || | || || || ||||||| | | || | | |||||||| |||| Sbjct 329996 GGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCATG 329937 Query 34061 GATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 34120 | ||| ||| | || | ||| || | |||||||| || || || |||| || || Sbjct 329936 CAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGTA 329877 Query 34121 CATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162 ||| | |||||| || || || | | ||||| | ||||| Sbjct 329876 CATTTGCCAGATATCGTGGTACTTCAAAGGGAAGAGCACAAA 329835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816293128480