Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016475.1_202016-02-08] 166 sequences; 9,367,240 total letters Query= NC_004812.1 Length=156789 Score E Sequences producing significant alignments: (Bits) Value seq72 246 3e-60 >seq72 Length=1366 Score = 246 bits (272), Expect = 3e-60 Identities = 201/244 (82%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 47165 TGCGGGACGCTGCTGGCGCTGCTGAACAAGTCGCTGCAGGGCCGCTCGATTTTCCAGGCC 47224 ||||| |||||| || ||||| | | | |||||||||||| |||||| | ||| ||||| Sbjct 1355 TGCGGCACGCTGTTGACGCTGTTAAGCGGGTCGCTGCAGGGTCGCTCGGTGTTCGAGGCC 1296 Query 47225 GCGCGGGTCACCTTAATATGCGAGGTGGACCTGGGGGCGCGGCGCCCCGACTGCCTTTGC 47284 | || ||||||||||||||||| |||||||| || |||| |||||||||||| | ||| Sbjct 1295 ACACGCGTCACCTTAATATGCGAAGTGGACCTCGGACCGCGCCGCCCCGACTGCATCTGC 1236 Query 47285 GTGTTTGAGTTTGCCAATGACGCAACGCTGGGCGGGGTCTGTGTCATCATCGAGCTGAAG 47344 ||||| || || ||||||||| |||||||||||||| ||||||||||| || || ||| Sbjct 1235 GTGTTCGAATTCGCCAATGACAAGACGCTGGGCGGGGTTTGTGTCATCATAGAACTAAAG 1176 Query 47345 ACGTGCAAGTTCATCTCTTCGGGCGACACCGCCAGCAAGCGCGAGCAACGGGCGACCGGG 47404 || ||||| | || ||||| || |||||||||||||| |||||||||||||| || ||| Sbjct 1175 ACATGCAAATATATTTCTTCCGGGGACACCGCCAGCAAACGCGAGCAACGGGCCACGGGG 1116 Query 47405 CTGA 47408 ||| Sbjct 1115 ATGA 1112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 501595759186640