Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016475.1_202016-02-08] 166 sequences; 9,367,240 total letters Query= NC_006146.1 Length=171096 Score E Sequences producing significant alignments: (Bits) Value seq76 379 2e-100 >seq76 Length=1131 Score = 379 bits (420), Expect = 2e-100 Identities = 267/304 (88%), Gaps = 2/304 (1%) Strand=Plus/Minus Query 91292 GGCAGGAGTGATGTAACTTATTAGGAGACGCCCTCAATCGTATTAAAAGCCATGTATTCC 91351 ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| Sbjct 468 GGCAGGAGTGATGTAACTTGTTAGGAGACGCCCTCAATCGTATTAAAAGCCGTGTATTCC 409 Query 91352 CCCGCACTAAAGAATAAACCCCC--TTGCCATCATGCGTGCTGTTAGTGGGTTTCTGTCC 91409 |||||||||||||||||| |||| | | |||||||||||||||| ||| |||||| || Sbjct 408 CCCGCACTAAAGAATAAATCCCCAGTAGACATCATGCGTGCTGTTGGTGTATTTCTGGCC 349 Query 91410 GTCTTTCTCGCTGTCATTTTTGTCCTCCCCACGTGGGGCAACTGGGCCTACCCATGTTGT 91469 ||| ||| | |||||| |||||||| || |||||||| ||||| |||||||||||| Sbjct 348 ATCTGTCTTGTCACCATTTTCGTCCTCCCAACATGGGGCAATTGGGCATACCCATGTTGT 289 Query 91470 CATGTCACTCAGCTCCGCGCTGAACACCTCCTTGCGCTGGAAAACATCAGCGACATTTAC 91529 || |||||||||||||||||| ||||||| || ||| |||||||||| |||||||||||| Sbjct 288 CACGTCACTCAGCTCCGCGCTCAACACCTTCTCGCGTTGGAAAACATTAGCGACATTTAC 229 Query 91530 CTGGTGAGCAATAAGACCTGTGATGGCTTCAGCCTGGCCTCCTTAAATTCAGCAAAGAAC 91589 |||||||||||| |||| || || ||||| ||||||||||||||||||||| | ||||| Sbjct 228 CTGGTGAGCAATCAGACATGCGACGGCTTTAGCCTGGCCTCCTTAAATTCACCTAAGAAT 169 Query 91590 GGGA 91593 |||| Sbjct 168 GGGA 165 Score = 98.7 bits (108), Expect = 1e-15 Identities = 271/412 (66%), Gaps = 14/412 (3%) Strand=Plus/Minus Query 90710 GAGGCAGTGGTAAAAAGGGAGGGTGGTTTGGGAGGCGCCGCGGCGAGGGTGGCAGAGGTT 90769 ||||||| | ||||| |||||||||||||| | || || || | || ||||| Sbjct 1017 GAGGCAGGCGCAAAAAAGGAGGGTGGTTTGGAAAGCATCGTGGTCAAGG------AGGTT 964 Query 90770 TCAA---GAAGTTTGAAAACATGGCAAAAAATCTCAAGGTGCTTCTAGCCAGATGTCAGG 90826 ||| ||| ||||| ||||| ||| || | | | | || || || || |||| | Sbjct 963 CCAACCCGAAATTTGAGAACATTGCAGAAGGTTTAAGAGCTCTCCTGGCTAGGAGTCACG 904 Query 90827 CTGAGCGGACGAAC-ACAACCGGTAACTGGCCATTTGGAGTTTTTGTATATGGCCCTA-- 90883 || |||| | | || | || | ||| || || || |||||||| || Sbjct 903 TAGAAAGGACTACCGACGAA-GGAACTTGGGTCGCCGGTGTGTTCGTATATGGAGGTAGT 845 Query 90884 -AAACTTCCTGTTACAACCTGAGGCGATGTATTGCCTGTTGTATACCAGAGTGCCGCCTT 90942 | || ||| ||||||||| |||||| | | |||| | ||| ||| | || || ||| Sbjct 844 AAGACCTCCCTTTACAACCTAAGGCGAGGAACTGCCCTTGCTATTCCACAATGTCGTCTT 785 Query 90943 ACGCCTCTAGGACGGCTGCCATTTGGCTATGCACCCGAGCCTGGCCCTCAACCTGGGCCC 91002 || || | | || || || ||||| || || | || ||||| |||||||| || Sbjct 784 ACACCATTGAGTCGTCTCCCCTTTGGAATGGCCCCTGGACCCGGCCCACAACCTGGCCCG 725 Query 91003 ATGAGAGAGTCTACAGATTGCTACTTCATCGTATTTTTACAAACTATGATATTTGCCGAA 91062 | || ||||| | | || || ||||| || |||||||||||| |||||||| || Sbjct 724 CTAAGGGAGTCCATTGTCTGTTATTTCATGGTCTTTTTACAAACTCATATATTTGCTGAG 665 Query 91063 TGTGTTAAGGATGCCCTTCGAGACTACATTATGACCAAGCCACTTCCGACCT 91114 | | |||||||| || ||| ||||||| ||||| ||| |||| Sbjct 664 GTTTTGAAGGATGCGATTAAGGACCTTGTTATGACAAAGCCCGCTCCTACCT 613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547378064188160