Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016475.1_202016-02-08]
166 sequences; 9,367,240 total letters
Query= NC_006146.1
Length=171096
Score E
Sequences producing significant alignments: (Bits) Value
seq76 379 2e-100
>seq76
Length=1131
Score = 379 bits (420), Expect = 2e-100
Identities = 267/304 (88%), Gaps = 2/304 (1%)
Strand=Plus/Minus
Query 91292 GGCAGGAGTGATGTAACTTATTAGGAGACGCCCTCAATCGTATTAAAAGCCATGTATTCC 91351
||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct 468 GGCAGGAGTGATGTAACTTGTTAGGAGACGCCCTCAATCGTATTAAAAGCCGTGTATTCC 409
Query 91352 CCCGCACTAAAGAATAAACCCCC--TTGCCATCATGCGTGCTGTTAGTGGGTTTCTGTCC 91409
|||||||||||||||||| |||| | | |||||||||||||||| ||| |||||| ||
Sbjct 408 CCCGCACTAAAGAATAAATCCCCAGTAGACATCATGCGTGCTGTTGGTGTATTTCTGGCC 349
Query 91410 GTCTTTCTCGCTGTCATTTTTGTCCTCCCCACGTGGGGCAACTGGGCCTACCCATGTTGT 91469
||| ||| | |||||| |||||||| || |||||||| ||||| ||||||||||||
Sbjct 348 ATCTGTCTTGTCACCATTTTCGTCCTCCCAACATGGGGCAATTGGGCATACCCATGTTGT 289
Query 91470 CATGTCACTCAGCTCCGCGCTGAACACCTCCTTGCGCTGGAAAACATCAGCGACATTTAC 91529
|| |||||||||||||||||| ||||||| || ||| |||||||||| ||||||||||||
Sbjct 288 CACGTCACTCAGCTCCGCGCTCAACACCTTCTCGCGTTGGAAAACATTAGCGACATTTAC 229
Query 91530 CTGGTGAGCAATAAGACCTGTGATGGCTTCAGCCTGGCCTCCTTAAATTCAGCAAAGAAC 91589
|||||||||||| |||| || || ||||| ||||||||||||||||||||| | |||||
Sbjct 228 CTGGTGAGCAATCAGACATGCGACGGCTTTAGCCTGGCCTCCTTAAATTCACCTAAGAAT 169
Query 91590 GGGA 91593
||||
Sbjct 168 GGGA 165
Score = 98.7 bits (108), Expect = 1e-15
Identities = 271/412 (66%), Gaps = 14/412 (3%)
Strand=Plus/Minus
Query 90710 GAGGCAGTGGTAAAAAGGGAGGGTGGTTTGGGAGGCGCCGCGGCGAGGGTGGCAGAGGTT 90769
||||||| | ||||| |||||||||||||| | || || || | || |||||
Sbjct 1017 GAGGCAGGCGCAAAAAAGGAGGGTGGTTTGGAAAGCATCGTGGTCAAGG------AGGTT 964
Query 90770 TCAA---GAAGTTTGAAAACATGGCAAAAAATCTCAAGGTGCTTCTAGCCAGATGTCAGG 90826
||| ||| ||||| ||||| ||| || | | | | || || || || |||| |
Sbjct 963 CCAACCCGAAATTTGAGAACATTGCAGAAGGTTTAAGAGCTCTCCTGGCTAGGAGTCACG 904
Query 90827 CTGAGCGGACGAAC-ACAACCGGTAACTGGCCATTTGGAGTTTTTGTATATGGCCCTA-- 90883
|| |||| | | || | || | ||| || || || |||||||| ||
Sbjct 903 TAGAAAGGACTACCGACGAA-GGAACTTGGGTCGCCGGTGTGTTCGTATATGGAGGTAGT 845
Query 90884 -AAACTTCCTGTTACAACCTGAGGCGATGTATTGCCTGTTGTATACCAGAGTGCCGCCTT 90942
| || ||| ||||||||| |||||| | | |||| | ||| ||| | || || |||
Sbjct 844 AAGACCTCCCTTTACAACCTAAGGCGAGGAACTGCCCTTGCTATTCCACAATGTCGTCTT 785
Query 90943 ACGCCTCTAGGACGGCTGCCATTTGGCTATGCACCCGAGCCTGGCCCTCAACCTGGGCCC 91002
|| || | | || || || ||||| || || | || ||||| |||||||| ||
Sbjct 784 ACACCATTGAGTCGTCTCCCCTTTGGAATGGCCCCTGGACCCGGCCCACAACCTGGCCCG 725
Query 91003 ATGAGAGAGTCTACAGATTGCTACTTCATCGTATTTTTACAAACTATGATATTTGCCGAA 91062
| || ||||| | | || || ||||| || |||||||||||| |||||||| ||
Sbjct 724 CTAAGGGAGTCCATTGTCTGTTATTTCATGGTCTTTTTACAAACTCATATATTTGCTGAG 665
Query 91063 TGTGTTAAGGATGCCCTTCGAGACTACATTATGACCAAGCCACTTCCGACCT 91114
| | |||||||| || ||| ||||||| ||||| ||| ||||
Sbjct 664 GTTTTGAAGGATGCGATTAAGGACCTTGTTATGACAAAGCCCGCTCCTACCT 613
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547378064188160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |