Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016475.1_202016-02-08] 166 sequences; 9,367,240 total letters Query= NC_006273.2 Length=235646 Score E Sequences producing significant alignments: (Bits) Value seq81 958 0.0 >seq81 Length=593 Score = 958 bits (1062), Expect = 0.0 Identities = 560/587 (95%), Gaps = 0/587 (0%) Strand=Plus/Plus Query 175152 CGTTGAATTTGGTGCCAAAACAAACTNNNNNNNNNNNNNNNNNNNNNNNGACTTGGAAAT 175211 |||||| ||||||||||||||||||| ||||||||||| Sbjct 1 CGTTGATTTTGGTGCCAAAACAAACTCCCATTGACGTCAATGGGGTGGAGACTTGGAAAT 60 Query 175212 CCCCGTGAGTCAAACCGCTATCCACGCCCATTGATGTACTGCCAAAACCGCATCACCATG 175271 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 61 CCCCGTGAGTCAAACCGCTATCCACGCCCATTGGTGTACTGCCAAAACCGCATCACCATG 120 Query 175272 GTAATAGCGATGACTAATACGTAGATGTACTGCCAAGTAGGAAAGTCCCGTAAGGTCATG 175331 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GTAATAGCGATGACTAATACGTAGATGTACTGCCAAGTAGGAAAGTCCCGTAAGGTCATG 180 Query 175332 TACTGGGCATAATGCCAGGCGGGCCATTTACCGTCATTGACGTCAATAGGGGGCGTACTT 175391 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 181 TACTGGGCATAATGCCAGGCGGGCCATTTACCGTCATTGACGTCAATAGGGGGCGGACTT 240 Query 175392 GGCATATGATACACTTGATGTACTGCCAAGTGGGCAGTTTACCGTAAATACTCCACCCAT 175451 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 GGCATATGATACACTTGATGTACTGCCAAGTGGGCAGTTTACCGTAAATACTCCACCCAT 300 Query 175452 TGACGTCAATGGAAAGTCCCTATTGGCGTTACTATGGGAACATACGTCATTATTGACGTC 175511 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 TGACGTCAATGGAAAGTCCCTATTGGCGTTACTATGGGAACATACGTCATTATTGACGTC 360 Query 175512 AATGGGCGGGGGTCGTTGGGCGGTCAGCCAGGCGGGCCATTTACCGTAAGTTATGTAACG 175571 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 AATGGGCGGGGGTCGTTGGGCGGTCAGCCAGGCGGGCCATTTACCGTAAGTTATGTAACG 420 Query 175572 CGGAACTCCATATATGGGCTATGAACTAATGACCCCGTAATTGATTACTATTAATAACTA 175631 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 CGGAACTCCATATATGGGCTATGAACTAATGACCCCGTAATTGATTACTATTAATAACTA 480 Query 175632 GTCAATAATCAATGTCAACATGGCGGTCATATTGGACATGAGCCAATATAAATGTACATA 175691 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 GTCAATAATCAATGTCAACATGGCGGTCATATTGGACATGAGCCAATATAAATGTACATA 540 Query 175692 TTATGATATAGATACAACGTATGCAATGGCCATTAGCCAATATTGAT 175738 |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 541 TTATGATATAGATACAACGTATGCAATGGCCAATAGCCAATATTGAT 587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 753937635576160