Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016475.1_202016-02-08]
166 sequences; 9,367,240 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq7 163 5e-35
seq14 161 2e-34
seq2 154 3e-32
seq15 145 1e-29
>seq7
Length=1035456
Score = 163 bits (180), Expect = 5e-35
Identities = 162/210 (77%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||| ||| | || ||||| || |||||||| || || || || || || || |||||
Sbjct 572185 ACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGAGTTCTACCGTCTTCC 572244
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||||| || || || || | | ||||||||| || ||||| |||||||||||||||
Sbjct 572245 AGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGAATTCCTTCCTTGTCTTGA 572304
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| | |||||| ||||||||||| | || || ||||||||||| || || ||
Sbjct 572305 ATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACTTCCAAGGTAATAGTCTTA 572364
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || | |||||||||||| |||||||||
Sbjct 572365 CCGGTTAAGGTCTTGACGAAAATCTGCATT 572394
>seq14
Length=213732
Score = 161 bits (178), Expect = 2e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309
||||||||||| || ||||| || ||||| || || ||||| || || || || || |||
Sbjct 213406 AATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTACCGTCT 213465
Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369
|| | ||||| || ||||| || | | ||| ||||| || ||||| ||||||||||||
Sbjct 213466 TCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTCT 213525
Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429
|||||||| | |||||| || || || |||| ||| ||||| || | ||||| ||
Sbjct 213526 TGAATCTTAGATTTGACGTTATCAATAGTATCTGATGACTCTACCTCAAGAGTGATAGTC 213585
Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || || ||||||||||| ||||||||
Sbjct 213586 TTACCAGTTAGAGTCTTGACGAAAATCTGCAT 213617
>seq2
Length=641799
Score = 154 bits (170), Expect = 3e-32
Identities = 162/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| | || ||||| ||||||||||| || || || | || || ||||| ||
Sbjct 409884 ACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCCTCC 409943
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
|| ||||| || || || || || | |||||||| || ||||| || |||||||| |||
Sbjct 409944 AATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAGGAATTCCCTCCTTGTCCTGA 410003
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| | ||||||| || || ||||| | || || || ||||||||||| || ||
Sbjct 410004 ATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCACCTCCAAGGTGATAGTCTTA 410063
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
|| || |||||||| ||||| || |||||| ||
Sbjct 410064 CCGGTAAGGGTCTTTACGAAAATTTGCATTTTG 410096
>seq15
Length=97362
Score = 145 bits (160), Expect = 1e-29
Identities = 158/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || ||||| || ||||||||||| ||||| || || || || || |||||
Sbjct 86 ACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGAAAGAGTTCTACCGTCTTCC 145
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||||| || || || || | | ||| ||||| || ||||| |||||||| ||||||
Sbjct 146 AGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCAGGAGGAATACCTTCCTTATCTTGA 205
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| | ||||| || || ||||||| ||| || || || | ||||| || ||
Sbjct 206 ATCTTGGATTTGACATTATCAATAGTGTCTGATGACTCCACCTCAAGAGTGATAGTCTTA 265
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || ||||| || || || |||||||||
Sbjct 266 CCTGTTAGGGTTTTAACAAAAATCTGCATT 295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921620487633520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |