Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016475.1_202016-02-08]
166 sequences; 9,367,240 total letters
Query= NC_009334.1
Length=172764
Score E
Sequences producing significant alignments: (Bits) Value
seq76 1018 0.0
seq82 304 1e-77
seq84 250 3e-61
seq75 122 1e-22
>seq76
Length=1131
Score = 1018 bits (1128), Expect = 0.0
Identities = 594/614 (97%), Gaps = 0/614 (0%)
Strand=Plus/Minus
Query 97744 ACCAAGAAGGTGGCCCAGATGGTGAGCCTGACATGCCCCCGGGAGCGATAGAGCAGGGCC 97803
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1131 ACCAAGAAGGTGGCCCAGATGGTGAGCCTGACGTGCCCCCGGGAGCGATAGAGCAGGGCC 1072
Query 97804 CCGCAGATGACCCAGGAGAAGGCCCAAGCACTGGACCCCGGGGTCAGGGTGATGGAGGCA 97863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1071 CCGCAGATGACCCAGGAGAAGGCCCAAGCACTGGACCCCGGGGTCAGGGTGATGGAGGCA 1012
Query 97864 GGCGCAAAAAAGGAGGGTGGTATGGAAAGCATCGTGGTGAAGGAGGTTCCAGCCAGAAAT 97923
||||||||||||||||||||| |||||||||||||||| |||||||||||| || |||||
Sbjct 1011 GGCGCAAAAAAGGAGGGTGGTTTGGAAAGCATCGTGGTCAAGGAGGTTCCAACCCGAAAT 952
Query 97924 TTGAGAACATTGCAGAAGGTTTAAGACTTCTCCTGGCTAGGTGTCACGTAGAAAGGACTA 97983
|||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct 951 TTGAGAACATTGCAGAAGGTTTAAGAGCTCTCCTGGCTAGGAGTCACGTAGAAAGGACTA 892
Query 97984 CCGAGGATGGAAATTGGGTCGCCGGTGTGTTCGTATATGGAGGTAGTAAGACCTCCCTTT 98043
|||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 891 CCGACGAAGGAACTTGGGTCGCCGGTGTGTTCGTATATGGAGGTAGTAAGACCTCCCTTT 832
Query 98044 ACAACCTCAGGCGAGGAATTGGCCTTGCTATTCCACAATGTCGTCTTACACCATTGAGTC 98103
||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 831 ACAACCTAAGGCGAGGAACTGCCCTTGCTATTCCACAATGTCGTCTTACACCATTGAGTC 772
Query 98104 GTCTCCCCTTTGGAATGGCCCCTGGACCCGGCCCACAACCTGGCCCACTAAGGGAGTCCA 98163
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 771 GTCTCCCCTTTGGAATGGCCCCTGGACCCGGCCCACAACCTGGCCCGCTAAGGGAGTCCA 712
Query 98164 TTGTCTGTTATTTCATTGTCTTTTTACAAACTCATATATTTGCTGAGGGTTTGAAGGATG 98223
|||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct 711 TTGTCTGTTATTTCATGGTCTTTTTACAAACTCATATATTTGCTGAGGTTTTGAAGGATG 652
Query 98224 CGATTAAGGACCTTGTTTTGCCAAAGCCCGCTCCTACCTGCAATATCAAGGTGACTGTGT 98283
||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||
Sbjct 651 CGATTAAGGACCTTGTTATGACAAAGCCCGCTCCTACCTGCAATATCAGGGTGACTGTGT 592
Query 98284 GCAGCTTTGACGATGGAGTAGATTTGCCTCCCTGGTTTCCACCTATGGTGGAAGGGGCTG 98343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 591 GCAGCTTTGACGATGGAGTAGATTTGCCTCCCTGGTTTCCACCTATGGTGGAAGGGGCTG 532
Query 98344 CCGCGGAGGGTGAT 98357
||||||||||||||
Sbjct 531 CCGCGGAGGGTGAT 518
Score = 544 bits (602), Expect = 9e-150
Identities = 306/309 (99%), Gaps = 0/309 (0%)
Strand=Plus/Minus
Query 98414 GTGATGTAACTTGTTAGGAGACGCCCTCAATCGTATTAAAAGCCGTGTATTCCCCCGCAC 98473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 461 GTGATGTAACTTGTTAGGAGACGCCCTCAATCGTATTAAAAGCCGTGTATTCCCCCGCAC 402
Query 98474 TAAAGAATAAATCCCCAGTAGACATCATGCGTACTGTTGGTGTATTTCTGGCCACCTGTC 98533
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct 401 TAAAGAATAAATCCCCAGTAGACATCATGCGTGCTGTTGGTGTATTTCTGGCCATCTGTC 342
Query 98534 TTGTCACCATTTTCGTCCTCCCAACATGGGGCAATTGGGCATACCCATGTTGTCACGTCA 98593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 341 TTGTCACCATTTTCGTCCTCCCAACATGGGGCAATTGGGCATACCCATGTTGTCACGTCA 282
Query 98594 CTCAGCTCCGCGCTCAACACCTTCTCGCGTTGGAAAACATTAGCGACATTTACCTGGTGA 98653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 281 CTCAGCTCCGCGCTCAACACCTTCTCGCGTTGGAAAACATTAGCGACATTTACCTGGTGA 222
Query 98654 GCAATCAGACATGCGACGGCTTTAGCCTGGCCTCCTTAAATTCACCTAAGAATGGGAGCA 98713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 221 GCAATCAGACATGCGACGGCTTTAGCCTGGCCTCCTTAAATTCACCTAAGAATGGGAGCA 162
Query 98714 ACCAGCTGG 98722
|||||| ||
Sbjct 161 ACCAGCAGG 153
Score = 199 bits (220), Expect = 4e-46
Identities = 113/115 (98%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 7342 GCAGGAAAAGGACAAGCAGCGAAAATTCACGCCCCCTTGGGAGGTGGCGGCATATGCAAA 7401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 157 GCAGGAAAAGGACAAGCAGCGAAAATTCACGCCCCCTTGGGAGGTGGCGGCATATGCAAA 98
Query 7402 GGATAGCACTCCCACTCTACTACTGGGTATTATATGCTGACTGTATATGCATTAG 7456
|||||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct 97 GGATAGCACTCCCACTCTACTACTGGGTATCATATGCTGACTGTATATGCATGAG 43
>seq82
Length=531
Score = 304 bits (336), Expect = 1e-77
Identities = 173/175 (99%), Gaps = 1/175 (1%)
Strand=Plus/Plus
Query 9330 TGCTTCAGGATGAAAGCCACTCAGTGTTGGCAAATGTGCACATCCATTTATAAGGATGTC 9389
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TGCTCCAGGATGAAAGCCACTCAGTGTTGGCAAATGTGCACATCCATTTATAAGGATGTC 60
Query 9390 AACTACAGTCAGAGAACCCCTTTGTGTTTGGTcccccccccGTGTCACATGTGGAACAGG 9449
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 61 AACTACAGTCAGAGAACCCCTTTGTGTTTGGT-CCCCCCCCGTGTCACATGTGGAACAGG 119
Query 9450 GCCCAGTTGGCAAGTTGTACCAACCAACTGAAGGGATTACATGCACTGCCCCGCG 9504
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 120 GCCCAGTTGGCAAGTTGTACCAACCAACTGAAGGGATTACATGCACTGCCCCGCG 174
>seq84
Length=513
Score = 250 bits (276), Expect = 3e-61
Identities = 144/148 (97%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 8014 ATCGCAACATTAGCCCACCGTGCTCTCAACGACCTCGTGAATATGAGGACCAACAACCCT 8073
|| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 366 ATGGCAACATTAGCCCACCGTGCTCTCAGCGACCTCGTGAATATGAGGACCAACAACCCT 425
Query 8074 GTGCTTGGCGCTCAGGCGCAAGTGTGTGTAACTTGTCTTCCAGATCGCAGCAATCGCGCC 8133
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 426 GTGCTTGGCGCTCAGGCGCAAGTGTGTGTAATTTGTCCTCCAGATCGCAGCAATCGCGCC 485
Query 8134 CCTATCTTGGCCCGCCCACCTACTTATG 8161
||||||||||||||||||||||||||||
Sbjct 486 CCTATCTTGGCCCGCCCACCTACTTATG 513
>seq75
Length=1131
Score = 122 bits (134), Expect = 1e-22
Identities = 69/70 (99%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 96108 GATCCTCACAGGCCGCACCCAGCTCTTCTTCCGTTGCCCCAGTAGCATCTCTGTCTGGTG 96167
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1062 GATCCTCACAGGCCGCACCCAGCTTTTCTTCCGTTGCCCCAGTAGCATCTCTGTCTGGTG 1121
Query 96168 ACCTTGAAGA 96177
||||||||||
Sbjct 1122 ACCTTGAAGA 1131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 552715653112640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |