Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016475.1_202016-02-08] 166 sequences; 9,367,240 total letters Query= NC_009334.1 Length=172764 Score E Sequences producing significant alignments: (Bits) Value seq76 1018 0.0 seq82 304 1e-77 seq84 250 3e-61 seq75 122 1e-22 >seq76 Length=1131 Score = 1018 bits (1128), Expect = 0.0 Identities = 594/614 (97%), Gaps = 0/614 (0%) Strand=Plus/Minus Query 97744 ACCAAGAAGGTGGCCCAGATGGTGAGCCTGACATGCCCCCGGGAGCGATAGAGCAGGGCC 97803 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1131 ACCAAGAAGGTGGCCCAGATGGTGAGCCTGACGTGCCCCCGGGAGCGATAGAGCAGGGCC 1072 Query 97804 CCGCAGATGACCCAGGAGAAGGCCCAAGCACTGGACCCCGGGGTCAGGGTGATGGAGGCA 97863 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1071 CCGCAGATGACCCAGGAGAAGGCCCAAGCACTGGACCCCGGGGTCAGGGTGATGGAGGCA 1012 Query 97864 GGCGCAAAAAAGGAGGGTGGTATGGAAAGCATCGTGGTGAAGGAGGTTCCAGCCAGAAAT 97923 ||||||||||||||||||||| |||||||||||||||| |||||||||||| || ||||| Sbjct 1011 GGCGCAAAAAAGGAGGGTGGTTTGGAAAGCATCGTGGTCAAGGAGGTTCCAACCCGAAAT 952 Query 97924 TTGAGAACATTGCAGAAGGTTTAAGACTTCTCCTGGCTAGGTGTCACGTAGAAAGGACTA 97983 |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct 951 TTGAGAACATTGCAGAAGGTTTAAGAGCTCTCCTGGCTAGGAGTCACGTAGAAAGGACTA 892 Query 97984 CCGAGGATGGAAATTGGGTCGCCGGTGTGTTCGTATATGGAGGTAGTAAGACCTCCCTTT 98043 |||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 891 CCGACGAAGGAACTTGGGTCGCCGGTGTGTTCGTATATGGAGGTAGTAAGACCTCCCTTT 832 Query 98044 ACAACCTCAGGCGAGGAATTGGCCTTGCTATTCCACAATGTCGTCTTACACCATTGAGTC 98103 ||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 831 ACAACCTAAGGCGAGGAACTGCCCTTGCTATTCCACAATGTCGTCTTACACCATTGAGTC 772 Query 98104 GTCTCCCCTTTGGAATGGCCCCTGGACCCGGCCCACAACCTGGCCCACTAAGGGAGTCCA 98163 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 771 GTCTCCCCTTTGGAATGGCCCCTGGACCCGGCCCACAACCTGGCCCGCTAAGGGAGTCCA 712 Query 98164 TTGTCTGTTATTTCATTGTCTTTTTACAAACTCATATATTTGCTGAGGGTTTGAAGGATG 98223 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct 711 TTGTCTGTTATTTCATGGTCTTTTTACAAACTCATATATTTGCTGAGGTTTTGAAGGATG 652 Query 98224 CGATTAAGGACCTTGTTTTGCCAAAGCCCGCTCCTACCTGCAATATCAAGGTGACTGTGT 98283 ||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| Sbjct 651 CGATTAAGGACCTTGTTATGACAAAGCCCGCTCCTACCTGCAATATCAGGGTGACTGTGT 592 Query 98284 GCAGCTTTGACGATGGAGTAGATTTGCCTCCCTGGTTTCCACCTATGGTGGAAGGGGCTG 98343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 591 GCAGCTTTGACGATGGAGTAGATTTGCCTCCCTGGTTTCCACCTATGGTGGAAGGGGCTG 532 Query 98344 CCGCGGAGGGTGAT 98357 |||||||||||||| Sbjct 531 CCGCGGAGGGTGAT 518 Score = 544 bits (602), Expect = 9e-150 Identities = 306/309 (99%), Gaps = 0/309 (0%) Strand=Plus/Minus Query 98414 GTGATGTAACTTGTTAGGAGACGCCCTCAATCGTATTAAAAGCCGTGTATTCCCCCGCAC 98473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 461 GTGATGTAACTTGTTAGGAGACGCCCTCAATCGTATTAAAAGCCGTGTATTCCCCCGCAC 402 Query 98474 TAAAGAATAAATCCCCAGTAGACATCATGCGTACTGTTGGTGTATTTCTGGCCACCTGTC 98533 |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct 401 TAAAGAATAAATCCCCAGTAGACATCATGCGTGCTGTTGGTGTATTTCTGGCCATCTGTC 342 Query 98534 TTGTCACCATTTTCGTCCTCCCAACATGGGGCAATTGGGCATACCCATGTTGTCACGTCA 98593 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 341 TTGTCACCATTTTCGTCCTCCCAACATGGGGCAATTGGGCATACCCATGTTGTCACGTCA 282 Query 98594 CTCAGCTCCGCGCTCAACACCTTCTCGCGTTGGAAAACATTAGCGACATTTACCTGGTGA 98653 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 281 CTCAGCTCCGCGCTCAACACCTTCTCGCGTTGGAAAACATTAGCGACATTTACCTGGTGA 222 Query 98654 GCAATCAGACATGCGACGGCTTTAGCCTGGCCTCCTTAAATTCACCTAAGAATGGGAGCA 98713 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 221 GCAATCAGACATGCGACGGCTTTAGCCTGGCCTCCTTAAATTCACCTAAGAATGGGAGCA 162 Query 98714 ACCAGCTGG 98722 |||||| || Sbjct 161 ACCAGCAGG 153 Score = 199 bits (220), Expect = 4e-46 Identities = 113/115 (98%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 7342 GCAGGAAAAGGACAAGCAGCGAAAATTCACGCCCCCTTGGGAGGTGGCGGCATATGCAAA 7401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 157 GCAGGAAAAGGACAAGCAGCGAAAATTCACGCCCCCTTGGGAGGTGGCGGCATATGCAAA 98 Query 7402 GGATAGCACTCCCACTCTACTACTGGGTATTATATGCTGACTGTATATGCATTAG 7456 |||||||||||||||||||||||||||||| ||||||||||||||||||||| || Sbjct 97 GGATAGCACTCCCACTCTACTACTGGGTATCATATGCTGACTGTATATGCATGAG 43 >seq82 Length=531 Score = 304 bits (336), Expect = 1e-77 Identities = 173/175 (99%), Gaps = 1/175 (1%) Strand=Plus/Plus Query 9330 TGCTTCAGGATGAAAGCCACTCAGTGTTGGCAAATGTGCACATCCATTTATAAGGATGTC 9389 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TGCTCCAGGATGAAAGCCACTCAGTGTTGGCAAATGTGCACATCCATTTATAAGGATGTC 60 Query 9390 AACTACAGTCAGAGAACCCCTTTGTGTTTGGTcccccccccGTGTCACATGTGGAACAGG 9449 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 61 AACTACAGTCAGAGAACCCCTTTGTGTTTGGT-CCCCCCCCGTGTCACATGTGGAACAGG 119 Query 9450 GCCCAGTTGGCAAGTTGTACCAACCAACTGAAGGGATTACATGCACTGCCCCGCG 9504 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 120 GCCCAGTTGGCAAGTTGTACCAACCAACTGAAGGGATTACATGCACTGCCCCGCG 174 >seq84 Length=513 Score = 250 bits (276), Expect = 3e-61 Identities = 144/148 (97%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 8014 ATCGCAACATTAGCCCACCGTGCTCTCAACGACCTCGTGAATATGAGGACCAACAACCCT 8073 || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 366 ATGGCAACATTAGCCCACCGTGCTCTCAGCGACCTCGTGAATATGAGGACCAACAACCCT 425 Query 8074 GTGCTTGGCGCTCAGGCGCAAGTGTGTGTAACTTGTCTTCCAGATCGCAGCAATCGCGCC 8133 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct 426 GTGCTTGGCGCTCAGGCGCAAGTGTGTGTAATTTGTCCTCCAGATCGCAGCAATCGCGCC 485 Query 8134 CCTATCTTGGCCCGCCCACCTACTTATG 8161 |||||||||||||||||||||||||||| Sbjct 486 CCTATCTTGGCCCGCCCACCTACTTATG 513 >seq75 Length=1131 Score = 122 bits (134), Expect = 1e-22 Identities = 69/70 (99%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 96108 GATCCTCACAGGCCGCACCCAGCTCTTCTTCCGTTGCCCCAGTAGCATCTCTGTCTGGTG 96167 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1062 GATCCTCACAGGCCGCACCCAGCTTTTCTTCCGTTGCCCCAGTAGCATCTCTGTCTGGTG 1121 Query 96168 ACCTTGAAGA 96177 |||||||||| Sbjct 1122 ACCTTGAAGA 1131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552715653112640