Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016475.1_202016-02-08] 166 sequences; 9,367,240 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq24 219 5e-52 seq22 96.9 4e-15 >seq24 Length=401274 Score = 219 bits (242), Expect = 5e-52 Identities = 797/1234 (65%), Gaps = 25/1234 (2%) Strand=Plus/Plus Query 106094 TCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAG 106153 ||||||| ||| |||| | | || || || | |||||||| | || || || ||| Sbjct 218501 TCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGAAGGTTTCGTAG 218560 Query 106154 GAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCA 106213 | |||| | | || ||||| | || |||| | ||| || || || |||||| Sbjct 218561 GCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGATAGTTTCA 218620 Query 106214 AAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATA 106273 || || || ||| | || |||||||| |||||||| | | || ||| Sbjct 218621 AAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGAATTCTCAACTTCATA 218680 Query 106274 AATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTT 106333 || |||| || | |||||||||||||| | | |||||||| | |||||||| || | Sbjct 218681 AAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCATATTCGATCTC 218740 Query 106334 CGCGCAGTCTC-AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAAC 106392 | || ||| |||||| |||||||||||||| || | || ||| | || ||||| Sbjct 218741 CTAGCT-TCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTTACGAGTAAC 218799 Query 106393 AATCTTTGTGATTTCATGAAGTTTTTCATA-----ATCAAAAGTGCGAGTCTCTTC---A 106444 | || ||||||||||| || |||||| | | || ||| |||| || || Sbjct 218800 CACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGT--GAGTATCATCGGTT 218857 Query 106445 TTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCT 106504 | ||| | |||||| || || || ||||| || || ||||| ||||| ||| Sbjct 218858 TCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCGGGGAA 218917 Query 106505 GTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGG 106564 | ||| || | |||||| || | ||| || ||||| ||||| ||||| ||| Sbjct 218918 GAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTCTTCTGG 218977 Query 106565 TTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGT 106624 ||| | |||||||| || |||||||| || |||||| | || || || || || || ||| Sbjct 218978 TTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTCTGTTTGT 219037 Query 106625 GACTTGAGAATTGCCTTCCACACATCGGCGGC--TGGTACAATGGCGTTGGCCCGTCCCT 106682 | || || || || | ||| | | ||| || | || | | | || || | Sbjct 219038 GCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTTGTC--TTCCACGACCTT 219095 Query 106683 CCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTG 106742 || ||||| || ||| | | ||||| || || || |||||| || || | Sbjct 219096 CCTTTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGACGTCGGCAAGGCCAG 219155 Query 106743 GTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAA 106802 | || | |||| |||| || | ||| | ||| || || || | |||||||| | Sbjct 219156 GAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTCATGAACA 219215 Query 106803 GGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGG 106861 | || || ||||||| | | || | |||||| | | || ||| || | ||| ||| Sbjct 219216 GATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGA-TCTCCTCTTTACCATGG 219274 Query 106862 TTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCG 106921 || || | |||| ||| | | ||| || || ||||||||||| | || | || Sbjct 219275 TTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTACAAAGCA 219334 Query 106922 ATAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATAC 106977 | | || | || | ||| |||| | ||||| || || ||| ||| || || Sbjct 219335 AATGCACCAGGACGTTTG-TTACCACCTTGGTCAACATAACGAGCAGTGTTGTTGAAGAC 219393 Query 106978 GCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATT 107037 | | ||||||||||||||||| || ||| || || || ||| ||| | Sbjct 219394 CCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGATCCTGT 219453 Query 107038 GGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACA 107097 ||| | | || ||| ||||||| ||||| || ||||| || |||||| ||||| Sbjct 219454 GGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGCACA 219513 Query 107098 CTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCA 107157 ||| | | ||| | || || || | |||||||| ||| |||| | | ||| || Sbjct 219514 TTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAAACA 219573 Query 107158 ACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA 107217 ||||| || || || |||||||| || || || || || | || ||| |||| Sbjct 219574 TGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGTGAA 219633 Query 107218 CATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGA 107276 |||| | || ||| || || || || | || ||||||| || || || | Sbjct 219634 -ATACTTCTGACTCATAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACCATGAA 219692 Query 107277 TGCCGATGGCCACACGCATAAACATGTATTGGGG 107310 ||||||| || |||||||||| || || ||| || Sbjct 219693 TGCCGATAGCAACACGCATAATCAAGTGTTGAGG 219726 >seq22 Length=546675 Score = 96.9 bits (106), Expect = 4e-15 Identities = 167/238 (70%), Gaps = 10/238 (4%) Strand=Plus/Minus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| | ||||| |||| | ||||||| ||||| |||||| | ||| Sbjct 330418 GCAAAGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCT 330359 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGAT 117392 ||||||||||| | |||||||||||| | |||| ||| || || || || |||||||| Sbjct 330358 GGCATGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAA-GATCCTGAAAAGAAGAT 330300 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTC-- 117449 |||||| ||| || || |||| | || || ||||| | | | | || || Sbjct 330299 ACCCTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAA----CAATGCATCGTCATCAG 330244 Query 117450 -AAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 117506 || |||| |||| ||||| | ||||| | | |||||||| | || | |||||| Sbjct 330243 AAATCCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGC 330186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979575789840