Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016475.1_202016-02-08]
166 sequences; 9,367,240 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq24 215 2e-50
seq6 102 2e-16
seq19 100 8e-16
seq2 98.7 3e-15
seq22 89.7 2e-12
>seq24
Length=401274
Score = 215 bits (238), Expect = 2e-50
Identities = 626/947 (66%), Gaps = 25/947 (3%)
Strand=Plus/Plus
Query 155582 AAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAAT 155641
|||| ||||||| |||| ||||| || |||||||| | | |||||| |||||
Sbjct 218872 AAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCGGGGAAGAGTATTCAACAAT 218931
Query 155642 CTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTT 155701
|||||||| |||||||| || ||| || || ||||||||||||| ||| ||||
Sbjct 218932 TTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTCTTCTGGTTAGTTTTTTTGTT 218991
Query 155702 ACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTT 155761
|||||||||||| || || ||| |||| || || || || | ||||| || || ||
Sbjct 218992 ACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTCTGTTTGTGCCTCAAGGATGGC 219051
Query 155762 TAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTG-CCTTCCGACTCATATTTCA 155820
||| || | |||| || || | |||| | | |||||| || ||| |
Sbjct 219052 GTACCAAAGCTTTTGGGCTTTGATG-GTTTGTCTTCCACGACCTTCCTTTTCGTATCTTT 219110
Query 155821 TATACAGCGTTCGGTAA--TCCTCACCGTAACAATCACTCAGTCCAGGG----CACTTAT 155874
|||| ||| || || || || || || || ||||| |||||
Sbjct 219111 CGTACAA--TTCCTCAAATTCATCTCCATAGACGTCGGCAAGGCCAGGAGCTTCACTT-- 219166
Query 155875 CGGGGCAAAACAGCGACCAAATTTTATTACCGAT-TACACGCTCCATAAATACATCACTC 155933
|| | ||||| | |||| ||| | | | ||| | | ||| || | ||||
Sbjct 219167 --GGAGAGAACAGGGTCCAATCGCCATT-CTGTTCTACTCTTTTCATGAACAGATCAGGG 219223
Query 155934 GCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGA-CTCCTCATCGCCGTGATTCTTCCG 155992
||| | ||| ||| | ||| || || | ||| |||||| | || || ||||| ||
Sbjct 219224 ATCCACAAAGCGGGGAATAAGTCTCTAGC-TCTGATCTCCTCTTTACCATGGTTCTTACG 219282
Query 155993 TAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACC 156052
| || | ||| | || || | ||| |||||||| |||| |||||| |||
Sbjct 219283 AATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTACAAAGCAAATGCACC 219342
Query 156053 ATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCAT 156109
| | ||| ||||| || || ||||| |||||||| || |||||||| | | |||
Sbjct 219343 AGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTGAAGACCCTCACCAT 219402
Query 156110 AGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAAC 156169
|||||||||||||| ||||| || || || || ||| | || || | | ||||
Sbjct 219403 TGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGATCCTGTGGCACGAAT 219462
Query 156170 ATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTAC 156229
||||||||| || | ||||| ||||| | ||| || ||| ||| |||||||| |
Sbjct 219463 ATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGCACATTCCTTCAA 219522
Query 156230 AGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAA 156289
||||| | |||| |||||||| || ||||| ||| | | || | || || |
Sbjct 219523 AGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAAACATGATGACAT 219582
Query 156290 TTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATT 156349
||| || | || || |||||||| || || ||||| | |||||| | |||||||| |
Sbjct 219583 TTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGTGAAATACTTCTG 219642
Query 156350 AGACATATAATCGTATGTCTCCTTAA-TCTTCTCAAGATTAGACCCGTGAATACAGATAG 156408
| |||| | | || || || ||| |||| ||| | | || ||||| | |||||
Sbjct 219643 ACTCATAAAGTTATAAGTTTCAATAACTCTT-GCAATGTCATCACCATGAATGCCGATAG 219701
Query 156409 AGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACT-CCATCAATTCGCAGAAGG 156467
|| | ||| || || |||||||| ||| ||| || | |||| ||||| |||||||
Sbjct 219702 CAACACGCATAATCAAGTGTTGAGGACGTTCTGCAA-CATTACCATTAATTCTCAGAAGG 219760
Query 156468 TATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATC 156514
|| | | ||||| || || || || || || | | || |||| ||
Sbjct 219761 TAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATACTGAAAGTC 219807
>seq6
Length=309333
Score = 102 bits (112), Expect = 2e-16
Identities = 380/579 (66%), Gaps = 30/579 (5%)
Strand=Plus/Plus
Query 251424 ACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGA 251483
||||||||| || | | ||||||||||||| || || | |||| ||| | ||
Sbjct 226153 ACACACATGTACTCGGAAAGCATCAGATGCTTCCATTAATCTTTCCTTCAAGAAACCAGC 226212
Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543
|||||||| | ||||||||| || | ||||| || |||||||||||||||||||| ||
Sbjct 226213 GGCACCGTGAGCAATCATACAGTCTCTTTCCATCTCTCCGAAACGAAGACCACCATCACG 226272
Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGT-GAGATTAACCATAGGACCGATGGAGCGGCTAT 251602
| ||||| || |||| || | || ||| | | ||| || ||| | | ||
Sbjct 226273 GGATCTACCTTCTACAGGTTGTCTGGTCAAGACT-TGTACAGGTCCTCTGGCTCTGGCAT 226331
Query 251603 GTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATGC 251662
| |||||||| |||||||| | || | |||||| ||| || || | ||| | |
Sbjct 226332 GAATCTTATCATCCACCATATGTCTCAGTCTCTGGTAATATGTTGGTCCAAAGAATA-CC 226390
Query 251663 TCGAAGGCAT---TTGCTCTCCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGATT 251719
| | | ||| || | ||||| | | || ||||| ||||| ||| ||||||
Sbjct 226391 TGG--GCCATTAATTTTTTACCAGTGTGTCCATTGTACATTACTTCAAATCCTCTAGATT 226448
Query 251720 CATAACCAAGTT---TCTGTAGCTCTGAAGCAATATCACCAATCTTGAATTTGCTAAAAC 251776
||| ||| | || | || | ||| | || ||| | || ||| || ||||
Sbjct 226449 GATACCCATTATCCCTCAGAAGGTTGGAAACCGCAT--CCACTGTTAAATCTG-TAAA-- 226503
Query 251777 TGGTG--CCGTCTCCGTAAAGAC--CCATTTGAATCAAC---ACTTTGCCTAAAAGTGTC 251829
||||| |||| || | | || | | | ||| |||| ||| || ||| |
Sbjct 226504 TGGTGTAGCGTCACCTTCATAACCTCTAATAGAACCAACCTTACTCAGC--AAA---CAC 226558
Query 251830 TCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCG 251889
|| | | || || | ||||||||| ||||||||||| || || || || | |||
Sbjct 226559 TCAATTAAGTGCGCAACCGTCATACGAGAAGGAATAGCATGTGGGTTAATAATCAAATCG 226618
Query 251890 GGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGT 251948
|| | || || ||| |||| |||||||| | | | | |||| | ||||| ||
Sbjct 226619 GGAACGATACCCTCTGCACTGAATGGCATATCTTCGTGC-CTATAAGTAACACCAATGGT 226677
Query 251949 TCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987
||||| || |||||||| || ||||||||||||||
Sbjct 226678 ACCCTTCTGACCGTGACGGGAGGCAAACTTATCACCAAT 226716
>seq19
Length=97239
Score = 100 bits (110), Expect = 8e-16
Identities = 309/470 (66%), Gaps = 21/470 (4%)
Strand=Plus/Minus
Query 288883 TCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTGCTTAAAT 288942
|| || | ||| ||||||||||| | ||||| ||||||| | || | | |||
Sbjct 57010 TCCAAAACATCAGCTCTGTTTGTACCAGCCAAGACAACAACATGGTCAGAACTATCAAAA 56951
Query 288943 CCATCCATACTTGT-TAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTC- 289000
|||||||| || | || | ||||| | ||| || ||||||| || |||||
Sbjct 56950 CCATCCAT-CTCGACTAGTAGCTGATTTAAAGTTGCCTCTTTTTCATCGTT---ACCTCC 56895
Query 289001 --TTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAAT 289058
| ||| ||| | | || | || | ||| | ||||||||||| |||| ||| ||
Sbjct 56894 CATGGAACCACTCTTA---CTACGTTCTCGACCGATCGCATCAATTTCATCAACGAATAT 56838
Query 289059 CACACACGGAGAATTTTGTCTCGCAATTGC--AAATAATTCTCTTACACGGGATGCTCCA 289116
| | | || | | | ||| || |||| |||||| || | || ||||| ||||||
Sbjct 56837 GATAGATGGCGCCATCTTTCTAGC--TTGCTGAAATAAATCACGAACTCGGGAAGCTCCA 56780
Query 289117 AGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCT 289176
| ||| ||| ||||||| ||||| |||||| | || || | |||| || |||
Sbjct 56779 ACACCCACAAACATTTCCACAAACTCAGAACCCGAAACAGACAAAAATGGAACTCCAGCT 56720
Query 289177 TCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGA 289236
||||| || |||| |||| || | ||||||||| || || || || | | | |||
Sbjct 56719 TCGCCAGCAGTTGCCTTCGCTAGCAATGTCTTACCAGTACCTGGAGGAC---CAGAAAGA 56663
Query 289237 A---CTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAAT 289293
| | || |||| | |||||| || || |||||||| ||| |||| | ||
Sbjct 56662 ATTGCACCTCTTGGAATTTTTGCTCCTAGTTTCTCATATTTCTTAGGATTCTTCAGGAAC 56603
Query 289294 TCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343
| || | |||| || ||| | ||| || ||||| || || || || ||
Sbjct 56602 TGAACGAATTCCATAATTTCTTCTTTAGCTTCATCGCAACCCGCCACGTC 56553
>seq2
Length=641799
Score = 98.7 bits (108), Expect = 3e-15
Identities = 83/102 (81%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 302583 CTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAG 302642
||| | ||||||||||||||||||||| ||| || ||||| |||||||||||||| |
Sbjct 114319 CTTCACTAAACGACGCTGAATATAACCTGTTTCAGCAGTTTTCACAGCTGTATCAATCAA 114260
Query 302643 ACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGG 302684
||| |||||||| |||| || || ||||| | ||||| |||
Sbjct 114259 ACCTTCACGACCAGCCATGGCGTGAAAGAAGAACTCTTGCGG 114218
>seq22
Length=546675
Score = 89.7 bits (98), Expect = 2e-12
Identities = 288/436 (66%), Gaps = 22/436 (5%)
Strand=Plus/Plus
Query 133232 GCGTTTTTTGCTGCGAGTGATGGTATTGTTCTTGAAAATTTAG--GAACACGGTTTATGG 133289
|| || |||||||| ||| |||||||| |||||| || | ||| | || | |
Sbjct 329994 GCCTTCTTTGCTGCCTCTGACGGTATTGTCAATGAAAACTTGGTGGAAAAT--TTCAGTG 330051
Query 133290 GAGAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATA 133349
|| |||||||| ||||||| |||||| || | ||||| |||||| || |
Sbjct 330052 CTGAGGTTCAACTTCCCGAAGCAAAATGCTTTTACGGTTTCCAGATCATGATGGAGAACA 330111
Query 133350 TCCATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAG- 133408
| || || || || || || |||||||||||||||||||| |||| |||
Sbjct 330112 TTCACTCCGAGACTTACTCCTTGCTGATTGATACTTACATCAAAGA-----TCCAAAAGA 330166
Query 133409 --CACAA--ACTATTCAACGCCATTAGCGA-ATTTCCTTGTATTAAAAAGAAATCTGACT 133463
| || || ||||| |||| | | || |||| ||||| ||| | || ||||||
Sbjct 330167 GTCTGAATTCCTGTTCAATGCCA-TCGAGACCATTCCATGTATCAAAGAAAAGGCTGACT 330225
Query 133464 GGGCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTG 133523
|||| || | |||||| || | ||| || ||| ||| | ||||| || |
Sbjct 330226 GGGCCATGAGATGGATTTCTGATGACGATGCATTGTTCGCTGAACGTTTGGTTGCCTTCG 330285
Query 133524 CTGTAGTAGAGGGCA--tttttttCAGTGGTGCGTTCTGC-TCTATTTTTTGGCTTAAAA 133580
||| || ||||| | || ||||||| | | || ||| ||||| || ||| | || |
Sbjct 330286 CTGCTGTTGAGGGTATCTTCTTTTCAG-GAT--CTTTTGCTTCTATCTTCTGGTTGAAGA 330342
Query 133581 AGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCAC 133640
|| | ||| | | || || || || || || || ||||||| || ||||||| |
Sbjct 330343 AGAGAGGTCTCATGCCAGGTTTGACCTTCTCCAATGAGCTTATTTGCAGAGACGAGGGAT 330402
Query 133641 TTCACACCGAATTTGC 133656
| ||||| || |||||
Sbjct 330403 TACACACTGACTTTGC 330418
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471814469627942
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |