Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016475.1_202016-02-08]
166 sequences; 9,367,240 total letters
Query= NC_024306.1
Length=149459
Score E
Sequences producing significant alignments: (Bits) Value
seq72 161 9e-35
>seq72
Length=1366
Score = 161 bits (178), Expect = 9e-35
Identities = 190/255 (75%), Gaps = 4/255 (2%)
Strand=Plus/Minus
Query 45480 GATTTGCGGAAGGCTGTTGATGATGATGAGCAAGTCGCTGCAAGGCCGCTCTATGTTTGA 45539
||| ||||| | |||||||| | || | ||| ||||||||| || ||||| |||| ||
Sbjct 1359 GATCTGCGGCACGCTGTTGACGCTGTTAAGCGGGTCGCTGCAGGGTCGCTCGGTGTTCGA 1300
Query 45540 GGCTCGGCGCGTGAGCTTAATATGCGAAGTGGACCTGGGGGCGCGCCGCCCAGATTGCAT 45599
||| ||||| | ||||||||||||||||||||| || |||||||||| || |||||
Sbjct 1299 GGCCACACGCGTCACCTTAATATGCGAAGTGGACCTCGGACCGCGCCGCCCCGACTGCAT 1240
Query 45600 TTGCATCTTCGAGTTCTCCAAT--CCGGATTCAGGAGGTGGAGTTTGCATCATTCTGGAA 45657
||| | ||||| ||| ||||| | || | | || || ||||| |||| | |||
Sbjct 1239 CTGCGTGTTCGAATTCGCCAATGACAAGACGCTG--GGCGGGGTTTGTGTCATCATAGAA 1182
Query 45658 CTCAAAACATGCAGGTTTATTTCCTCGGGCGAGACGGCGAGTAAACGAGAGCAGCGCGCC 45717
|| || ||||||| | |||||| || || || || || || ||||| ||||| || |||
Sbjct 1181 CTAAAGACATGCAAATATATTTCTTCCGGGGACACCGCCAGCAAACGCGAGCAACGGGCC 1122
Query 45718 ACAGGTATGCATCAG 45732
|| || ||| | |||
Sbjct 1121 ACGGGGATGAAGCAG 1107
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478139807857840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |