Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016475.1_202016-02-08]
166 sequences; 9,367,240 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq24 208 9e-49
seq22 104 3e-17
>seq24
Length=401274
Score = 208 bits (230), Expect = 9e-49
Identities = 789/1225 (64%), Gaps = 21/1225 (2%)
Strand=Plus/Minus
Query 104229 ACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGA 104288
|| || | ||||| || || ||||| |||||||| || ||||||| || | || |
Sbjct 219719 ACTTGATTATGCGTGTTGCTATCGGCATTCATGGTGATGACATTGCAAGAGTTATTGAAA 219660
Query 104289 CATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCT 104347
| || || ||| || | |||| |||| ||| || | || || || || || |||
Sbjct 219659 CTTATAACTTTATGAGTCAGAAGTAT-TTCACTCATGCCTCTCCTACTCTGTTTAACGCT 219601
Query 104348 GGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATC 104407
||||| || || |||||||| || ||| | | |||| ||| ||||||||
Sbjct 219600 GGTACCCCTCACCCACAAATGTCATCATGTTTCTTAGTTGCCATGCGGGATGACTCAATT 219541
Query 104408 AACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATT 104467
| || || || | ||| | | ||| ||||| |||||| || ||||| || |||
Sbjct 219540 GAAGGCATTTACGATACTTTGAAGGAATGTGCTTTAATCTCCAAAACTGCTGGTGGAATT 219481
Query 104468 GGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAA 104527
|| ||||||| ||| || | | |||| ||| ||| || || || |||
Sbjct 219480 GGTTTGCACATTCATAATATTCGTGCCACAGGATCCTACATTGCTGGTACTAACGGTACT 219421
Query 104528 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAA 104587
|| ||||||||||||||||| | | || || ||| ||| || || ||||| | |||
Sbjct 219420 TCGAATGGTATTATTCCAATGGTGAGGGTCTTCAACAACACTGCTCGTTATGTTGACCAA 219361
Query 104588 GCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATAT 104643
| | || | || | || | | || | || | ||||||||||| || || ||
Sbjct 219360 GGT-GGTAACAAACGTCCTGGTGCATTTGCTTTGTACTTGGAGCCATGGCATGCCGACAT 219302
Query 104644 CATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-CGCGATC 104702
| | | ||| |||| | ||| ||||| ||| | ||||| | | | || | ||
Sbjct 219301 CTTTGCCTTCATTGATATTCGTAAGAACCATGGTAAAGAGGA-GATCAGAGCTAGAGACT 219243
Query 104703 TCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATT 104762
| ||| ||||| | ||||| || ||||| |||||||| ||||| || ||| |||| |||
Sbjct 219242 TATTCCCCGCTTTGTGGATCCCTGATCTGTTCATGAAAAGAGTAGAACAGAATGGCGATT 219183
Query 104763 GGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTG 104822
|| | || || | |||| | || ||||| || |||| | | || || || ||||
Sbjct 219182 GGACCCTGTTCTCTCCAAGTGAAGCTCCTGGCCTTGCCGACGTCTATGGAGATGAATTTG 219123
Query 104823 AAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCG 104882
| | | ||| || ||||| | |||||||| | | || | |||
Sbjct 219122 AGGAATTGTACGAAAGATACGAAAAGGAAGGTCGTGGAAGACAAACCATCAAAGCCCAAA 219063
Query 104883 ATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACA 104942
| | ||| | || || || || | ||||| || |||||||| |||| |||||| || |
Sbjct 219062 AGCTTTGGTACGCCATCCTTGAGGCACAAACAGAAACTGGTACTCCATTCATGCTGTATA 219003
Query 104943 AAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATC 105002
| || || |||||| |||| | ||| || ||||| |||||||| || || || || |
Sbjct 219002 AGGATGCTTGTAACAAAAAAACTAACCAGAAGAACTTGGGTGTCATTAAATCCTCTAACC 218943
Query 105003 TCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCAT 105062
| || ||||| | |||| | | || ||||| ||||| |||||| | || |
Sbjct 218942 TTTGCTGTGAAATTGTTGAATACTCTTCCCCGGAAGAGACTGCTGTCTGTAACTTGGCTT 218883
Query 105063 CAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGACATTTG-----ATTATGAAA 105116
| || ||||| || | ||| || | || || | || || | | |||||
Sbjct 218882 CTATTGCTCTTCCAGCCTTTGTTGAAACCGATGATACTCACTGCTGGTACAACTTTGAAA 218823
Query 105117 AACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATT 105176
| || || ||| | || ||| || || ||| | |||||| |||| || |||||||
Sbjct 218822 AGCTGCATGAAATCACCAAAGTGGTTACTCGTAACTTGAACAGAATTATCGACAGAAATT 218763
Query 105177 TTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGT 105235
||||||||||| ||| ||| | | ||| |||||| | | | || || | | | |||
Sbjct 218762 TTTACCCCGTTCCAGA-AGCTAGGAGATCGAATATGCGTAATAGACCTATAGCTGTGGGT 218704
Query 105236 GTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCG 105295
||||| ||| | || |||| || || | | | |||||||| |||||
Sbjct 218703 GTTCAAGGTTTAGCTGATGCTTTTATGAAGTTGAGAATTCCTTTTGATTCTCCAGAAGCC 218644
Query 105296 AAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCA 105355
|| | | ||| | || ||||| || || || || || ||| | || || | ||
Sbjct 218643 AAACAGCTTAATATTCAGATTTTTGAAACTATCTACCATGCAGCTTTGGAAGC--CTCCA 218586
Query 105356 --GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAG 105413
|| || || | | || || | || |||||||| | ||||||||||| || || |
Sbjct 218585 ACGAATTAGCCGTCGAAGAAGGAGCCTACGAAACCTTCCAAGGTTCTCCAGCATCTCAGG 218526
Query 105414 GGGTGCTTCAATTTGATATGTGGGA 105438
| | | |||| ||| |||||||
Sbjct 218525 GCATTTTGCAATATGACTTGTGGGA 218501
>seq22
Length=546675
Score = 104 bits (114), Expect = 3e-17
Identities = 167/235 (71%), Gaps = 4/235 (2%)
Strand=Plus/Plus
Query 94723 GCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT 94782
|||||| | || |||| ||||| || | || || || ||||| |||| ||| || |
Sbjct 330186 GCCATCGAGACCATTCCATGTATCAAAGAAAAGGCTGACTGGGCCATGAGATGGATTTCT 330245
Query 94783 -ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTT 94841
| | | || || || ||||| || | | || || || |||||||||||||||
Sbjct 330246 GATGACGATGCATTG-TTCGCTGAACGTTTGGTTGCCTTCGCTGCTGTTGAGGGTATCTT 330304
Query 94842 CTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTC 94900
||| || || | ||| ||| |||| | ||| | |||||| |||||||||||||||||
Sbjct 330305 CTTTTCAGGAT-CTTTTGCTTCTATCTTCTGGTTGAAGAAGAGAGGTCTCATGCCAGGTT 330363
Query 94901 TCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
| ||||||||| |||||||| | | ||||||||| | ||| || |||||
Sbjct 330364 TGACCTTCTCCAATGAGCTTATTTGCAGAGACGAGGGATTACACACTGACTTTGC 330418
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583259589733840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |