Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016485.1_202016-02-08] 131 sequences; 9,353,010 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1 145 6e-30 >seq1 Length=591227 Score = 145 bits (160), Expect = 6e-30 Identities = 380/576 (66%), Gaps = 19/576 (3%) Strand=Plus/Plus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 || |||||||| || ||||| |||||||||||| | |||||||||||| | ||| ||| Sbjct 279576 GGCGATTTGGGGCCAGTGTACGGATTTCAATGGCGCCATTTTGGAGCTCAGTATAAAGAC 279635 Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATT 20337 || ||| | || ||||||||| | |||||| | | || ||| | || Sbjct 279636 TGTAAGACAGACTACACTGGACAAGGGTTTGATCAACTTTCTAGGGTAATTGAAACTCTT 279695 Query 20338 AAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCT 20397 || || ||| | ||||||||||| || | | || |||||| || |||| | Sbjct 279696 CGTACCAATCCATATGACAGAAGAATAATCATGAGTGCATGGAACCCTCCAGATTTTGAG 279755 Query 20398 TTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTA---------AT 20448 ||||||| | || || |||||| | | || || ||||| ||| || || Sbjct 279756 AAAATGGCTCTCCCACCCTGTCATGTATTTTGTCACTTTTATGTTTCTTTCCCGAAAGAT 279815 Query 20449 AA------TGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTT 20502 || |||||| || ||| ||||||||| || ||| |||||||||| |||| ||| Sbjct 279816 AAAAAGCCTGAATTATCTTGTTTAATGTATCAGCGCTCCTGTGATATGGGATTGGGAGTT 279875 Query 20503 CCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTA 20562 |||||||| | || |||||||| |||| || | ||||| ||||| || ||| | Sbjct 279876 CCTTTCAACGTCGCCAGTTATGCCTTGCTGACCAAAATGATAGCACACGTAGTCGATATG 279935 Query 20563 AAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGA- 20621 | || ||||| | || ||||| || || || ||| | ||||| | ||| |||| Sbjct 279936 GACTGTGGGGACTTTATACATACCATGGGTGATGCACATGTGTACCTAGACCATGTAGAT 279995 Query 20622 ACCTTTAAAATTACAGTTAACACGACAACCAAAACAATTCCCAACTCTTCGCAT-TACTC 20680 || | ||| || | | | | || |||| | |||| || || | | || || | Sbjct 279996 GCCCTGAAAGTTCAGGCTGAAAGGATTCCCAAGA-AATTTCCCACGTTAAGAATCAACAC 280054 Query 20681 GAACTGTTAAAGATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATC 20740 |||| |||||||| | | ||| ||| ||| || ||| | |||| |||| ||| Sbjct 280055 GAAC-ACCAAAGATATCGATGGTTTCAAATTTGAGGACTTTCAGATAGATAATTATGATC 280113 Query 20741 CCCATAATTCAATTCCAATGGAAATGTCTGTTTAAT 20776 | ||| | || |||| ||||||| || |||| Sbjct 280114 CTCATCCACCCATCAAAATGAAAATGTCCGTGTAAT 280149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399183362677795