Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016485.1_202016-02-08] 131 sequences; 9,353,010 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq9 136 4e-27 seq22 134 1e-26 seq21 131 2e-25 >seq9 Length=694444 Score = 136 bits (150), Expect = 4e-27 Identities = 174/240 (73%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || |||||||||| |||||||| | ||||| || || || Sbjct 131809 ATGCAGATTTTCGTCAAGACCTTAACCGGTAAGACTATTACCTTGGAAGTCGAGTCCTCC 131868 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| |||||||| |||||||| ||||| || ||| Sbjct 131869 GACACCATCGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCTCCTGACCAA 131928 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||||||||| ||||| || || || ||||| || |||| |||| || || ||| Sbjct 131929 CAACGTTTGATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTGTCTGACTACAAC 131988 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCCA 24943 || || ||||| || || | ||| |||| || ||||| | || || | ||||||| Sbjct 131989 ATCCAGAAGGAGTCTACTTTGCACCTGGTTCTGAGATTGAGAGGTGGTATCATTGAGCCA 132048 >seq22 Length=97383 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| ||||||| ||||| ||||| ||||| || || || || || | | Sbjct 308 ATGCAGATTTTTGTTAAAACCCTAACAGGTAAGACTATCACTCTTGAGGTGGAGTCATCA 249 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||||| ||||| || ||||| || ||||| || || Sbjct 248 GACACTATTGATAATGTCAAATCCAAGATTCAAGATAAGGAAGGTATTCCTCCTGACCAG 189 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||||| || ||||| || || || ||||| || |||| | || ||||| ||| Sbjct 188 CAACGTTTAATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGATTACAAC 129 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || ||||||||||| || || |||||||| Sbjct 128 ATCCAAAAGGAATCCACCCTCCACTTGGT 100 >seq21 Length=213742 Score = 131 bits (144), Expect = 2e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || ||||| ||||| ||||| || || || ||||| | | Sbjct 213620 ATGCAGATTTTCGTCAAGACTCTAACTGGTAAGACTATCACTCTTGAGGTAGAGTCATCA 213561 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| ||||| |||||||| ||||| || ||||| || || Sbjct 213560 GATACTATTGATAACGTCAAATCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAG 213501 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||||||||||| || || || || ||||| || |||| | || ||||| || Sbjct 213500 CAACGTTTGATCTTCGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGATTACAAT 213441 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTT 24915 |||||||||||||| || || |||||||| || Sbjct 213440 ATTCAAAAGGAATCCACTCTTCACTTGGTATT 213409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896863292680