Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016485.1_202016-02-08] 131 sequences; 9,353,010 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 2e-12 >seq1 Length=591227 Score = 87.8 bits (96), Expect = 2e-12 Identities = 107/145 (74%), Gaps = 1/145 (1%) Strand=Plus/Plus Query 168595 GGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTTACCGAAAGAAAAGAAG 168654 |||| || ||||| ||||| |||| ||||| | | || || | || ||| | | | Sbjct 279518 GGAAGGA-AATGGGTCTCGGGAATACTTAGACTCCTTGGGATTAAAAGATAGAGAGGTTG 279576 Query 168655 GTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATTGACT 168714 | ||||| || ||| | || |||||||||||| | ||| |||||||| |||| |||| Sbjct 279577 GCGATTTGGGGCCAGTGTACGGATTTCAATGGCGCCATTTTGGAGCTCAGTATAAAGACT 279636 Query 168715 GTGATACAGATTACACCGGACAAGG 168739 || | ||||| ||||| |||||||| Sbjct 279637 GTAAGACAGACTACACTGGACAAGG 279661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635176559896680