Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016485.1_202016-02-08] 131 sequences; 9,353,010 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq24 149 5e-31 >seq24 Length=546621 Score = 149 bits (164), Expect = 5e-31 Identities = 391/585 (67%), Gaps = 24/585 (4%) Strand=Plus/Minus Query 43721 TATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAA 43780 || || || || |||||||||||||| | || | || || |||||||| || || ||| Sbjct 216776 TACCACGATATCTGGCAAATGTACAAGCAGGCCGAAGCTTCCTTTTGGACTGCTGAGGAA 216717 Query 43781 GTTGATTTGACTAAAGACTTAGCAC-ATTGGATTG--CATTAAAACCACAA-GAAAAACA 43836 | || || ||| || || ||| | |||| | | | ||| | || |||||| Sbjct 216716 ATAGACCTGGGTAAGGATTT-GCATGACTGGAATAATCGTATGAACGATAATGAAAAATT 216658 Query 43837 TTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTT 43896 || || || || | || || |||||||| ||||| || ||||||||||| || Sbjct 216657 CTTCATCTCGAGAGTCCTTGCCTTCTTTGCTGCCTCTGACGGTATTGTCAATGAAAACTT 216598 Query 43897 GGTTAGTCGGTTT--GCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTT 43954 ||| | ||| | || || |||||| | || |||||| ||| ||||| || || Sbjct 216597 GGTG-GAAAATTTCAGTGCT-GAGGTTCAACTTCCCGAAGCAAAATGCTTTTACGGTTTC 216540 Query 43955 CAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATC 44014 || || || || || ||||| || || | ||| | ||||| ||||| |||||| Sbjct 216539 CAGATCATGATGGAGAACATTCACTCCGAGACTTACTCCTTGCTGATTGATACTTACATC 216480 Query 44015 AAAGATGGGCACGAGAAGCATCGATT---GTTTAATGCGATAGAAACAGTACCTGCGATT 44071 |||||| || ||| | | ||| ||| ||||| || || || | || || Sbjct 216479 AAAGATC--CAAAAGAGTC-TGAATTCCTGTTCAATGCCATCGAGACCATTCCATGTATC 216423 Query 44072 AAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCT------TTTGGA 44125 ||| | || || ||||||||| | | |||||| ||| |||| | || | Sbjct 216422 AAAGAAAAGGCTGACTGGGCCATGAGATGGAT---TTCTGATGACGATGCATTGTTCGCT 216366 Query 44126 GAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCC 44185 ||||| | || || || || | ||| || || || |||||||||||||| ||||| | Sbjct 216365 GAACGTTTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTTTCAGGATCTTTTGCTTCT 216306 Query 44186 ATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATA 44245 || || ||||| ||||| ||||| | ||||| || ||||| || || |||||| | || Sbjct 216305 ATCTTCTGGTTGAAGAAGAGAGGTCTCATGCCAGGTTTGACCTTCTCCAATGAGCTTATT 216246 Query 44246 AGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTT 44290 | | || || || ||||| || |||||||||||| || || Sbjct 216245 TGCAGAGACGAGGGATTACACACTGACTTTGCTTGCTTGCTATTT 216201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455365436655