Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016485.1_202016-02-08]
131 sequences; 9,353,010 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq21 152 1e-31
seq22 149 2e-30
seq3 129 1e-24
seq9 125 2e-23
seq101 89.7 1e-12
>seq21
Length=213742
Score = 152 bits (168), Expect = 1e-31
Identities = 165/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || ||||| || || || || ||||| || ||||| || |||||
Sbjct 213617 CAGATTTTCGTCAAGACTCTAACTGGTAAGACTATCACTCTTGAGGTAGAGTCATCAGAT 213558
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || ||||||||| |||||||| ||||| ||||| || ||||| |||||||||
Sbjct 213557 ACTATTGATAACGTCAAATCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAGCAA 213498
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || || || || ||||| || || |||||| | ||||| || |
Sbjct 213497 CGTTTGATCTTCGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGATTACAATATT 213438
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| ||||| || || || | || || ||||| |||
Sbjct 213437 CAAAAGGAATCCACTCTTCACTTGGTATTAAGACTTAGA 213399
>seq22
Length=97383
Score = 149 bits (164), Expect = 2e-30
Identities = 165/219 (75%), Gaps = 1/219 (0%)
Strand=Plus/Minus
Query 177913 TTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGG 177972
|||||| | || ||||| || ||||| || ||||| || || ||||| || |||||||
Sbjct 316 TTAAAAAAATGCAGATTTTTGTTAAAACCCTAACAGGTAAGACTATCACTCTTGAGGTGG 257
Query 177973 AAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTC 178032
| |||||||| || || || |||||| |||||||| || || ||||| || ||||
Sbjct 256 AGTCATCAGACACTATTGATAATGTCAAATCCAAGATTCAAGATAAGGAAGGTATTCCTC 197
Query 178033 CGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCG 178092
| ||||||||||| | || || || || || || || ||||| || || |||||| | |
Sbjct 196 CTGACCAGCAACGTTTAATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTG 137
Query 178093 ATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTT 178131
|||| ||| ||||||| ||||| || || || |||| ||
Sbjct 136 ATTACAACATCCAAAAGGAATCCACCCTCCA-CTTGGTT 99
>seq3
Length=641781
Score = 129 bits (142), Expect = 1e-24
Identities = 158/214 (74%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| |||||||||| || || || || || || || |||||| | ||||||||
Sbjct 231714 AAAATGC---AAATTTTCGTAAAGACCCTTACCGGTAAGACTATCACCTTGGAGGTGGAG 231770
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
|| ||||| || || |||||||| |||||||||||||| || ||||| |||||
Sbjct 231771 TCTTCCGACACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCTCCT 231830
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
||||| || || || ||||| || || || || | || ||||| || ||| | | ||
Sbjct 231831 GACCAACAGCGTCTGATCTTTGCTGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGAC 231890
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128
|| ||| ||||||| || || || |||| ||||
Sbjct 231891 TACAACATCCAAAAGGAGTCTACTTTGCA-CTTG 231923
>seq9
Length=694444
Score = 125 bits (138), Expect = 2e-23
Identities = 165/228 (72%), Gaps = 3/228 (1%)
Strand=Plus/Plus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | |||||||| || || | || || || || || ||| | || || ||
Sbjct 131806 AAAATGC---AGATTTTCGTCAAGACCTTAACCGGTAAGACTATTACCTTGGAAGTCGAG 131862
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
||| ||||||||||| || ||||| |||||||| ||||| |||||||| |||||
Sbjct 131863 TCCTCCGACACCATCGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCTCCT 131922
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
||||| ||||| | || || || || || || || ||||| || || ||||| | ||
Sbjct 131923 GACCAACAACGTTTGATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTGTCTGAC 131982
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| ||| |||| || || || || |||| || ||| ||||| | |||
Sbjct 131983 TACAACATCCAGAAGGAGTCTACTTTGCACCTGGTTCTGAGATTGAGA 132030
>seq101
Length=201
Score = 89.7 bits (98), Expect = 1e-12
Identities = 88/114 (77%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 178029 CCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTT 178088
||||| ||||||||||| | |||||||| || || || | |||||||| || ||||||
Sbjct 3 CCTCCTGACCAGCAACGTTTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTCTT 62
Query 178089 GCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
| || || ||| ||||||| ||||| || || || | ||||| ||||| |||
Sbjct 63 TCTGACTACAACATCCAAAAGGAATCTACTCTCCACTTGGTTTTAAGACTGAGA 116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203729179612414
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |