Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016495.1_202016-02-08]
134 sequences; 9,351,186 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq1 95.1 8e-15
seq23 91.5 9e-14
seq22 89.7 3e-13
>seq1
Length=1282582
Score = 95.1 bits (104), Expect = 8e-15
Identities = 160/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 33141 CACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAG 33200
|||| ||||| || | | ||||| ||||| || ||||| ||||| || ||||| ||||
Sbjct 1203327 CACCACCTCTCAATCTAAGGACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAG 1203386
Query 33201 ACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGG 33260
||||| | || ||||||||||| ||| ||| || | ||| || ||||| | |
Sbjct 1203387 ACAAAGTTCTACCATCCTCCAATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAG 1203446
Query 33261 GTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAA 33320
| || || || || || |||| || || | | ||| |||||| | | |
Sbjct 1203447 GAATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCA 1203506
Query 33321 CGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372
| |||| || || || || || ||||| || ||||||||||||||||| ||
Sbjct 1203507 CCTCCAAGGTGATAGTCTTACCGGTAAGGGTCTTTACGAAAATTTGCATTTT 1203558
>seq23
Length=97376
Score = 91.5 bits (100), Expect = 9e-14
Identities = 162/236 (69%), Gaps = 8/236 (3%)
Strand=Plus/Plus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| || ||||| | | ||||| || | || || || ||||| || |||||||||||
Sbjct 81 ACCACCCCTTAATCTTAGAACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGA 140
Query 33202 CAAATTGAGTT----GGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCG 33257
| ||||| ||| |||| |||||| ||| ||| ||||||||||||||||| |
Sbjct 141 AA----GAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCAG 196
Query 33258 TGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTT 33317
|| || ||||| || || |||| ||| || | | ||| ||||| | |
Sbjct 197 GAGGAATACCTTCCTTATCTTGAATCTTGGATTTGACATTATCAATAGTGTCTGATGACT 256
Query 33318 GAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTT 33373
|| || ||||| || || || || || || ||||| || ||||| ||||| |||
Sbjct 257 CCACCTCAAGAGTGATAGTCTTACCTGTTAGGGTTTTAACAAAAATCTGCATTTTT 312
>seq22
Length=136613
Score = 89.7 bits (98), Expect = 3e-13
Identities = 161/235 (69%), Gaps = 8/235 (3%)
Strand=Plus/Plus
Query 33139 TTCACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATC 33198
|||||| ||||| | | || ||||| || | || || || ||||| |||||||||||
Sbjct 136300 TTCACCACCTCTAAGTCTTAATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATC 136359
Query 33199 AGACAAATTGAGTT----GGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGT 33254
||| | ||||| ||| |||| |||||| ||| || || |||||||||||||
Sbjct 136360 AGAAA----GAGTTCTACCGTCTTCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGT 136415
Query 33255 CCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGG 33314
| | || || ||||| || || |||| ||| || | | ||| || || |
Sbjct 136416 CAGGAGGAATACCTTCCTTGTCTTGAATCTTAGATTTGACGTTATCAATAGTATCTGATG 136475
Query 33315 GTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
| || || ||||| || || || || || ||||| || |||||||| |||||
Sbjct 136476 ACTCTACCTCAAGAGTGATAGTCTTACCAGTTAGAGTCTTGACGAAAATCTGCAT 136530
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318777079396332
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |