Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016495.1_202016-02-08] 134 sequences; 9,351,186 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 8e-15 seq23 91.5 9e-14 seq22 89.7 3e-13 >seq1 Length=1282582 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 33141 CACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAG 33200 |||| ||||| || | | ||||| ||||| || ||||| ||||| || ||||| |||| Sbjct 1203327 CACCACCTCTCAATCTAAGGACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAG 1203386 Query 33201 ACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGG 33260 ||||| | || ||||||||||| ||| ||| || | ||| || ||||| | | Sbjct 1203387 ACAAAGTTCTACCATCCTCCAATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAG 1203446 Query 33261 GTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAA 33320 | || || || || || |||| || || | | ||| |||||| | | | Sbjct 1203447 GAATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCA 1203506 Query 33321 CGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372 | |||| || || || || || ||||| || ||||||||||||||||| || Sbjct 1203507 CCTCCAAGGTGATAGTCTTACCGGTAAGGGTCTTTACGAAAATTTGCATTTT 1203558 >seq23 Length=97376 Score = 91.5 bits (100), Expect = 9e-14 Identities = 162/236 (69%), Gaps = 8/236 (3%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| || ||||| | | ||||| || | || || || ||||| || ||||||||||| Sbjct 81 ACCACCCCTTAATCTTAGAACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGA 140 Query 33202 CAAATTGAGTT----GGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCG 33257 | ||||| ||| |||| |||||| ||| ||| ||||||||||||||||| | Sbjct 141 AA----GAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCAG 196 Query 33258 TGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTT 33317 || || ||||| || || |||| ||| || | | ||| ||||| | | Sbjct 197 GAGGAATACCTTCCTTATCTTGAATCTTGGATTTGACATTATCAATAGTGTCTGATGACT 256 Query 33318 GAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTT 33373 || || ||||| || || || || || || ||||| || ||||| ||||| ||| Sbjct 257 CCACCTCAAGAGTGATAGTCTTACCTGTTAGGGTTTTAACAAAAATCTGCATTTTT 312 >seq22 Length=136613 Score = 89.7 bits (98), Expect = 3e-13 Identities = 161/235 (69%), Gaps = 8/235 (3%) Strand=Plus/Plus Query 33139 TTCACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATC 33198 |||||| ||||| | | || ||||| || | || || || ||||| ||||||||||| Sbjct 136300 TTCACCACCTCTAAGTCTTAATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATC 136359 Query 33199 AGACAAATTGAGTT----GGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGT 33254 ||| | ||||| ||| |||| |||||| ||| || || ||||||||||||| Sbjct 136360 AGAAA----GAGTTCTACCGTCTTCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGT 136415 Query 33255 CCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGG 33314 | | || || ||||| || || |||| ||| || | | ||| || || | Sbjct 136416 CAGGAGGAATACCTTCCTTGTCTTGAATCTTAGATTTGACGTTATCAATAGTATCTGATG 136475 Query 33315 GTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 | || || ||||| || || || || || ||||| || |||||||| ||||| Sbjct 136476 ACTCTACCTCAAGAGTGATAGTCTTACCAGTTAGAGTCTTGACGAAAATCTGCAT 136530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318777079396332