Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016495.1_202016-02-08]
134 sequences; 9,351,186 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq28 185 1e-41
seq25 127 2e-24
>seq28
Length=271146
Score = 185 bits (204), Expect = 1e-41
Identities = 940/1473 (64%), Gaps = 53/1473 (4%)
Strand=Plus/Plus
Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001
||||| |||| ||||| || || || ||||| |||| ||||| ||||||| || ||
Sbjct 88214 TAGATGTTGGAAGTGTAAGGTTCGAAACACTCGTTGTAACCCAGAATTTGGGAAGTTGAA 88273
Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061
|| |||||||| ||||| | || | ||| | | ||| | ||| |
Sbjct 88274 GCAGTGGGCATAGGTGCAACTAGCAACGAGTTTCTTAAACCTGTGGAAACAATCTTGGCT 88333
Query 114062 TTGAGGGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGA 114119
||||| | ||||| || | | | || | || | | ||||| ||| | || |
Sbjct 88334 TTGAGTGATTCCCATTCCCACAGCTCAGAG--GGCTTCTTGTCCCACAAGTCATATTGCA 88391
Query 114120 GGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCA 114179
|| || || || ||||| || || | || || ||||| | || || | | || |
Sbjct 88392 AAATGCCCTGAGATGCTGGAGAACCTTGGAAGGTTTCGTAGGCTCCTTCTTCGACGGCTA 88451
Query 114180 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTG 114239
||||| | || || | ||||| || || || || |||||||| || ||| |
Sbjct 88452 ATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGATAGTTTCAAAAATCTGAATATTAAGCT 88511
Query 114240 CCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTT 114299
||||| || |||||||| | | || || ||||| |||| || | |||||
Sbjct 88512 GTTTGGCTTCTGGAGAATCAAAAGGAATTCTCAACTTCATAAAAGCATCAGCTAAACCTT 88571
Query 114300 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA-CGGGA 114358
| ||||| | | || || | || | |||||| || | | ||| ||| | ||||
Sbjct 88572 GAACACCCACAGCTATAGGTCTATTACGCATATTCGATCTCCTAGCT-TCTGGAACGGGG 88630
Query 114359 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 114418
|||||||| || ||||||| || || | || || || || || |||||||||||
Sbjct 88631 TAAAAATTTCTGTCGATAATTCTGTTCAAGTTACGAGTAACCACTTTGGTGATTTCATGC 88690
Query 114419 AGCTTTTCGTAATCAAAACTGC---GAGTCTCTTCATTG---ACATACTTAGGAAGGGCG 114472
|||||||| | | | | || |||| || || | ||| | ||||| ||
Sbjct 88691 AGCTTTTCAAAGTTGTACCAGCAGTGAGTATCATCGGTTTCAACAAAGGCTGGAAGAGCA 88750
Query 114473 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 114532
|| || |||| ||||| |||| ||||| ||| || ||| || | |||||| |
Sbjct 88751 ATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCGGGGAAGAGTATTCAACAATTTC---A 88807
Query 114533 CA-CAAA--TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 114589
|| |||| || || |||||| ||||||||||| || || | ||| |||||||
Sbjct 88808 CAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTCTTCTGGTTAGTTTTTTTGTTACAA 88867
Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649
|||||||| || |||||| |||| || || || || ||||| | || || || || | |
Sbjct 88868 GCATCCTTATACAGCATGAATGGAGTACCAGTTTCTGTTTGTGCCTCAAGGATGGCGTAC 88927
Query 114650 CAGACATCGGCGGCTGGCACAGTGGCGTTGGCT----CGCCCCTCCTCCTCGTACTTTGT 114705
|| | | |||| | || ||| || || || |||| ||||| ||
Sbjct 88928 CAAAGCTTTTGGGCTTTGATGGT----TTGTCTTCCACGACCTTCCTTTTCGTATCTTTC 88983
Query 114706 GTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCA 114765
||| | | ||||| || || || | | || | || || || || | | ||| |
Sbjct 88984 GTACAATTCCTCAAATTCATCTCCATAGACGTCGGCAAGGCCAGGAGCTTCACTTGGAGA 89043
Query 114766 GAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAG 114825
||| || | ||| | ||| || || || | |||||||| || || |||||||| |
Sbjct 89044 GAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTCATGAACAGATCAGGGATCCACAA 89103
Query 114826 AGCTGAGAAGAGATCCCGACAGC-GAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCA 114884
||| | ||| | || | | | || || || | | || || || ||| | || |
Sbjct 89104 AGCGGGGAATAAGTCTCTAGCTCTGATCTCCT-CTTTACCATGGTTCTTACGAATATCAA 89162
Query 114885 AAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGAC 114944
||| | | ||| || || ||||| || |||| ||||| || | || || | |||
Sbjct 89163 TGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTACAAAGCAAATGCACC---AGGAC 89219
Query 114945 G------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAA 114998
| |||| | |||| ||||| | || ||| || || || | | ||||||||
Sbjct 89220 GTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTGAAGACCCTCACCATTGGAA 89279
Query 114999 TGATACCATCAGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTATTGGCTCTGACATC 115056
| ||||||| || || || || || ||| | || || |||| | | ||
Sbjct 89280 TAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGATCCTG--TGGCACGAATATT 89337
Query 115057 ATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACT 115116
||| ||||||| |||||| || || || || |||||| || || ||| | | | |
Sbjct 89338 ATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGCACATTCCTTCAAAGT 89397
Query 115117 GCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTG 115176
|||| || || || || |||||| || | || | | ||| || ||||||||
Sbjct 89398 ATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAAACATGATGACATTTG 89457
Query 115177 TGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGA 115236
||| || ||||||||||| || || || || | || || |||| ||| ||| ||
Sbjct 89458 TGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGTGAA-ATA-CTTCTGA 89515
Query 115237 CATCTTA---TCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGA 115293
| || || | || || || | || | |||||| || || ||||| ||||| |
Sbjct 89516 C-TCATAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACCATGAATGCCGATAGC 89574
Query 115294 GACCCGCATAAACATGTATTG-GGGTGTT-TCCATCAGGATACCATCGAGCCTCTGGAGG 115351
|| ||||||| || || ||| || ||| | || || |||||| | ||| | |||
Sbjct 89575 AACACGCATAATCAAGTGTTGAGGACGTTCTGCAACA--TTACCATTAATTCTCAGAAGG 89632
Query 115352 TAA-CTCTTCTCCAAGGTCTTGAGACCAAAATA 115383
||| |||| ||||||||||||| ||||| ||
Sbjct 89633 TAAGATCTT-TCCAAGGTCTTGAATCCAAAGTA 89664
>seq25
Length=536034
Score = 127 bits (140), Expect = 2e-24
Identities = 384/583 (66%), Gaps = 19/583 (3%)
Strand=Plus/Plus
Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106
||||| || ||| | |||||||| | | | || || ||||| |||||| || |||
Sbjct 216172 GCAAAGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCT 216231
Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166
||||||||||| | ||||||||||||||| || | | ||| || || || ||||||||
Sbjct 216232 GGCATGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATA 216291
Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAA- 126225
||||| ||| ||||| |||| | ||| ||||| || | || | | | |||
Sbjct 216292 CCCTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAA-CAATGCATCGTCATCAGAAAT 216350
Query 126226 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TTCA- 126283
||| |||| ||||| | ||||||| | |||||| || | ||||| ||| || || |
Sbjct 216351 CCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAA 216410
Query 126284 -AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGT 126342
| || ||| | ||| ||||||||||||||| |||| || || || || ||
Sbjct 216411 CAGGAATTCAGAC---TCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTAAGT 216467
Query 126343 TTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTA 126401
||| ||| | | | ||| || | ||| | |||| || | |||||| |
Sbjct 216468 CTCGGAGTGAATGTTCTCCATCAT-GATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAA 216526
Query 126402 TCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAG 126461
|| |||||| | ||||| | | || ||| ||||| || || || |||
Sbjct 216527 GTTGAACCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAG 216586
Query 126462 CAAAAAACGCCAGGA---TATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCT 126515
|||| || || |||| | | | | |||||| |||||| ||||||| | | |
Sbjct 216587 CAAAGAAGGCAAGGACTCTCGAGATGAAGAATTT---TTCATTATCGTTCATACGATTAT 216643
Query 126516 TCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATTTGAG 126575
||||||| | | |||||| || |||| ||||| ||||||||| | || |
Sbjct 216644 TCCAGTCATGCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGG 216703
Query 126576 CCTTCTTATAGAGTTCCCAAAGGTGGGGATACTTCAGGGGGAA 126618
||| ||| || | || ||| | | | | ||||||| |||||
Sbjct 216704 CCTGCTTGTACATTTGCCAGATATCGTGGTACTTCAAAGGGAA 216746
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597352599432720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |