Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016495.1_202016-02-08] 134 sequences; 9,351,186 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq28 185 1e-41 seq25 127 2e-24 >seq28 Length=271146 Score = 185 bits (204), Expect = 1e-41 Identities = 940/1473 (64%), Gaps = 53/1473 (4%) Strand=Plus/Plus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| |||| ||||| || || || ||||| |||| ||||| ||||||| || || Sbjct 88214 TAGATGTTGGAAGTGTAAGGTTCGAAACACTCGTTGTAACCCAGAATTTGGGAAGTTGAA 88273 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || |||||||| ||||| | || | ||| | | ||| | ||| | Sbjct 88274 GCAGTGGGCATAGGTGCAACTAGCAACGAGTTTCTTAAACCTGTGGAAACAATCTTGGCT 88333 Query 114062 TTGAGGGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGA 114119 ||||| | ||||| || | | | || | || | | ||||| ||| | || | Sbjct 88334 TTGAGTGATTCCCATTCCCACAGCTCAGAG--GGCTTCTTGTCCCACAAGTCATATTGCA 88391 Query 114120 GGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCA 114179 || || || || ||||| || || | || || ||||| | || || | | || | Sbjct 88392 AAATGCCCTGAGATGCTGGAGAACCTTGGAAGGTTTCGTAGGCTCCTTCTTCGACGGCTA 88451 Query 114180 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTG 114239 ||||| | || || | ||||| || || || || |||||||| || ||| | Sbjct 88452 ATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGATAGTTTCAAAAATCTGAATATTAAGCT 88511 Query 114240 CCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTT 114299 ||||| || |||||||| | | || || ||||| |||| || | ||||| Sbjct 88512 GTTTGGCTTCTGGAGAATCAAAAGGAATTCTCAACTTCATAAAAGCATCAGCTAAACCTT 88571 Query 114300 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA-CGGGA 114358 | ||||| | | || || | || | |||||| || | | ||| ||| | |||| Sbjct 88572 GAACACCCACAGCTATAGGTCTATTACGCATATTCGATCTCCTAGCT-TCTGGAACGGGG 88630 Query 114359 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 114418 |||||||| || ||||||| || || | || || || || || ||||||||||| Sbjct 88631 TAAAAATTTCTGTCGATAATTCTGTTCAAGTTACGAGTAACCACTTTGGTGATTTCATGC 88690 Query 114419 AGCTTTTCGTAATCAAAACTGC---GAGTCTCTTCATTG---ACATACTTAGGAAGGGCG 114472 |||||||| | | | | || |||| || || | ||| | ||||| || Sbjct 88691 AGCTTTTCAAAGTTGTACCAGCAGTGAGTATCATCGGTTTCAACAAAGGCTGGAAGAGCA 88750 Query 114473 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 114532 || || |||| ||||| |||| ||||| ||| || ||| || | |||||| | Sbjct 88751 ATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCGGGGAAGAGTATTCAACAATTTC---A 88807 Query 114533 CA-CAAA--TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 114589 || |||| || || |||||| ||||||||||| || || | ||| ||||||| Sbjct 88808 CAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTCTTCTGGTTAGTTTTTTTGTTACAA 88867 Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649 |||||||| || |||||| |||| || || || || ||||| | || || || || | | Sbjct 88868 GCATCCTTATACAGCATGAATGGAGTACCAGTTTCTGTTTGTGCCTCAAGGATGGCGTAC 88927 Query 114650 CAGACATCGGCGGCTGGCACAGTGGCGTTGGCT----CGCCCCTCCTCCTCGTACTTTGT 114705 || | | |||| | || ||| || || || |||| ||||| || Sbjct 88928 CAAAGCTTTTGGGCTTTGATGGT----TTGTCTTCCACGACCTTCCTTTTCGTATCTTTC 88983 Query 114706 GTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCA 114765 ||| | | ||||| || || || | | || | || || || || | | ||| | Sbjct 88984 GTACAATTCCTCAAATTCATCTCCATAGACGTCGGCAAGGCCAGGAGCTTCACTTGGAGA 89043 Query 114766 GAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAG 114825 ||| || | ||| | ||| || || || | |||||||| || || |||||||| | Sbjct 89044 GAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTCATGAACAGATCAGGGATCCACAA 89103 Query 114826 AGCTGAGAAGAGATCCCGACAGC-GAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCA 114884 ||| | ||| | || | | | || || || | | || || || ||| | || | Sbjct 89104 AGCGGGGAATAAGTCTCTAGCTCTGATCTCCT-CTTTACCATGGTTCTTACGAATATCAA 89162 Query 114885 AAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGAC 114944 ||| | | ||| || || ||||| || |||| ||||| || | || || | ||| Sbjct 89163 TGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTACAAAGCAAATGCACC---AGGAC 89219 Query 114945 G------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAA 114998 | |||| | |||| ||||| | || ||| || || || | | |||||||| Sbjct 89220 GTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTGAAGACCCTCACCATTGGAA 89279 Query 114999 TGATACCATCAGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTATTGGCTCTGACATC 115056 | ||||||| || || || || || ||| | || || |||| | | || Sbjct 89280 TAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGATCCTG--TGGCACGAATATT 89337 Query 115057 ATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACT 115116 ||| ||||||| |||||| || || || || |||||| || || ||| | | | | Sbjct 89338 ATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGCACATTCCTTCAAAGT 89397 Query 115117 GCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTG 115176 |||| || || || || |||||| || | || | | ||| || |||||||| Sbjct 89398 ATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAAACATGATGACATTTG 89457 Query 115177 TGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGA 115236 ||| || ||||||||||| || || || || | || || |||| ||| ||| || Sbjct 89458 TGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGTGAA-ATA-CTTCTGA 89515 Query 115237 CATCTTA---TCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGA 115293 | || || | || || || | || | |||||| || || ||||| ||||| | Sbjct 89516 C-TCATAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACCATGAATGCCGATAGC 89574 Query 115294 GACCCGCATAAACATGTATTG-GGGTGTT-TCCATCAGGATACCATCGAGCCTCTGGAGG 115351 || ||||||| || || ||| || ||| | || || |||||| | ||| | ||| Sbjct 89575 AACACGCATAATCAAGTGTTGAGGACGTTCTGCAACA--TTACCATTAATTCTCAGAAGG 89632 Query 115352 TAA-CTCTTCTCCAAGGTCTTGAGACCAAAATA 115383 ||| |||| ||||||||||||| ||||| || Sbjct 89633 TAAGATCTT-TCCAAGGTCTTGAATCCAAAGTA 89664 >seq25 Length=536034 Score = 127 bits (140), Expect = 2e-24 Identities = 384/583 (66%), Gaps = 19/583 (3%) Strand=Plus/Plus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| | |||||||| | | | || || ||||| |||||| || ||| Sbjct 216172 GCAAAGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCT 216231 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 ||||||||||| | ||||||||||||||| || | | ||| || || || |||||||| Sbjct 216232 GGCATGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATA 216291 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAA- 126225 ||||| ||| ||||| |||| | ||| ||||| || | || | | | ||| Sbjct 216292 CCCTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAA-CAATGCATCGTCATCAGAAAT 216350 Query 126226 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TTCA- 126283 ||| |||| ||||| | ||||||| | |||||| || | ||||| ||| || || | Sbjct 216351 CCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAA 216410 Query 126284 -AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGT 126342 | || ||| | ||| ||||||||||||||| |||| || || || || || Sbjct 216411 CAGGAATTCAGAC---TCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTAAGT 216467 Query 126343 TTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTA 126401 ||| ||| | | | ||| || | ||| | |||| || | |||||| | Sbjct 216468 CTCGGAGTGAATGTTCTCCATCAT-GATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAA 216526 Query 126402 TCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAG 126461 || |||||| | ||||| | | || ||| ||||| || || || ||| Sbjct 216527 GTTGAACCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAG 216586 Query 126462 CAAAAAACGCCAGGA---TATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCT 126515 |||| || || |||| | | | | |||||| |||||| ||||||| | | | Sbjct 216587 CAAAGAAGGCAAGGACTCTCGAGATGAAGAATTT---TTCATTATCGTTCATACGATTAT 216643 Query 126516 TCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATTTGAG 126575 ||||||| | | |||||| || |||| ||||| ||||||||| | || | Sbjct 216644 TCCAGTCATGCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGG 216703 Query 126576 CCTTCTTATAGAGTTCCCAAAGGTGGGGATACTTCAGGGGGAA 126618 ||| ||| || | || ||| | | | | ||||||| ||||| Sbjct 216704 CCTGCTTGTACATTTGCCAGATATCGTGGTACTTCAAAGGGAA 216746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352599432720