Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016495.1_202016-02-08]
134 sequences; 9,351,186 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq28 219 5e-52
seq25 96.9 4e-15
>seq28
Length=271146
Score = 219 bits (242), Expect = 5e-52
Identities = 797/1234 (65%), Gaps = 25/1234 (2%)
Strand=Plus/Plus
Query 106094 TCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAG 106153
||||||| ||| |||| | | || || || | |||||||| | || || || |||
Sbjct 88373 TCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGAAGGTTTCGTAG 88432
Query 106154 GAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCA 106213
| |||| | | || ||||| | || |||| | ||| || || || ||||||
Sbjct 88433 GCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGATAGTTTCA 88492
Query 106214 AAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATA 106273
|| || || ||| | || |||||||| |||||||| | | || |||
Sbjct 88493 AAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGAATTCTCAACTTCATA 88552
Query 106274 AATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTT 106333
|| |||| || | |||||||||||||| | | |||||||| | |||||||| || |
Sbjct 88553 AAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCATATTCGATCTC 88612
Query 106334 CGCGCAGTCTC-AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAAC 106392
| || ||| |||||| |||||||||||||| || | || ||| | || |||||
Sbjct 88613 CTAGCT-TCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTTACGAGTAAC 88671
Query 106393 AATCTTTGTGATTTCATGAAGTTTTTCATA-----ATCAAAAGTGCGAGTCTCTTC---A 106444
| || ||||||||||| || |||||| | | || ||| |||| || ||
Sbjct 88672 CACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGT--GAGTATCATCGGTT 88729
Query 106445 TTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCT 106504
| ||| | |||||| || || || ||||| || || ||||| ||||| |||
Sbjct 88730 TCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCGGGGAA 88789
Query 106505 GTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGG 106564
| ||| || | |||||| || | ||| || ||||| ||||| ||||| |||
Sbjct 88790 GAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTCTTCTGG 88849
Query 106565 TTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGT 106624
||| | |||||||| || |||||||| || |||||| | || || || || || || |||
Sbjct 88850 TTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTCTGTTTGT 88909
Query 106625 GACTTGAGAATTGCCTTCCACACATCGGCGGC--TGGTACAATGGCGTTGGCCCGTCCCT 106682
| || || || || | ||| | | ||| || | || | | | || || |
Sbjct 88910 GCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTTGTC--TTCCACGACCTT 88967
Query 106683 CCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTG 106742
|| ||||| || ||| | | ||||| || || || |||||| || || |
Sbjct 88968 CCTTTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGACGTCGGCAAGGCCAG 89027
Query 106743 GTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAA 106802
| || | |||| |||| || | ||| | ||| || || || | |||||||| |
Sbjct 89028 GAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTCATGAACA 89087
Query 106803 GGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGG 106861
| || || ||||||| | | || | |||||| | | || ||| || | ||| |||
Sbjct 89088 GATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGA-TCTCCTCTTTACCATGG 89146
Query 106862 TTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCG 106921
|| || | |||| ||| | | ||| || || ||||||||||| | || | ||
Sbjct 89147 TTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTACAAAGCA 89206
Query 106922 ATAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATAC 106977
| | || | || | ||| |||| | ||||| || || ||| ||| || ||
Sbjct 89207 AATGCACCAGGACGTTTG-TTACCACCTTGGTCAACATAACGAGCAGTGTTGTTGAAGAC 89265
Query 106978 GCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATT 107037
| | ||||||||||||||||| || ||| || || || ||| ||| |
Sbjct 89266 CCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGATCCTGT 89325
Query 107038 GGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACA 107097
||| | | || ||| ||||||| ||||| || ||||| || |||||| |||||
Sbjct 89326 GGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGCACA 89385
Query 107098 CTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCA 107157
||| | | ||| | || || || | |||||||| ||| |||| | | ||| ||
Sbjct 89386 TTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAAACA 89445
Query 107158 ACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA 107217
||||| || || || |||||||| || || || || || | || ||| ||||
Sbjct 89446 TGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGTGAA 89505
Query 107218 CATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGA 107276
|||| | || ||| || || || || | || ||||||| || || || |
Sbjct 89506 -ATACTTCTGACTCATAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACCATGAA 89564
Query 107277 TGCCGATGGCCACACGCATAAACATGTATTGGGG 107310
||||||| || |||||||||| || || ||| ||
Sbjct 89565 TGCCGATAGCAACACGCATAATCAAGTGTTGAGG 89598
>seq25
Length=536034
Score = 96.9 bits (106), Expect = 4e-15
Identities = 167/238 (70%), Gaps = 10/238 (4%)
Strand=Plus/Plus
Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333
||||| || ||| | ||||| |||| | ||||||| ||||| |||||| | |||
Sbjct 216172 GCAAAGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCT 216231
Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGAT 117392
||||||||||| | |||||||||||| | |||| ||| || || || || ||||||||
Sbjct 216232 GGCATGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCA-AAAGATCCTGAAAAGAAGAT 216290
Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTC-- 117449
|||||| ||| || || |||| | || || ||||| | | | | || ||
Sbjct 216291 ACCCTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAA----CAATGCATCGTCATCAG 216346
Query 117450 -AAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 117506
|| |||| |||| ||||| | ||||| | | |||||||| | || | ||||||
Sbjct 216347 AAATCCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGC 216404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589979811782160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |