Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016495.1_202016-02-08]
134 sequences; 9,351,186 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq28 150 9e-32
seq10 111 8e-20
>seq28
Length=271146
Score = 150 bits (166), Expect = 9e-32
Identities = 344/511 (67%), Gaps = 10/511 (2%)
Strand=Plus/Plus
Query 25890 TTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAA 25949
||||| |||| | |||||| |||| || || ||| | | ||| || | ||| || |
Sbjct 89037 TTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTCATGAACAGATCAGGGA 89096
Query 25950 TCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTA 26009
|||||| || ||||| ||||| ||||| || || ||||| || || ||||| |
Sbjct 89097 TCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTCTTTACCATGGTTCTTACGAA 89156
Query 26010 GATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTT 26069
||| | ||| |||| || || | |||||||| || || || | |||||| |||
Sbjct 89157 TATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTACAAAGCAAATGCACCAG 89216
Query 26070 TTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTG 26129
| ||| |||||||| || || || | ||||| | ||||| || ||| |||||
Sbjct 89217 GACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTGAAGACCCTCACCATTG 89276
Query 26130 GAACTAAT-CCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATA 26188
||| |||| ||| | ||| ||||| || | | ||| | ||||||||| | | ||||
Sbjct 89277 GAA-TAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGATCCTGTGGCACGAATA 89335
Query 26189 TCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATC--TGAAA 26246
| ||| || | ||| ||||||||||| ||| || || ||||| || | |||
Sbjct 89336 TTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGCACATTCCTTCAAA 89395
Query 26247 CTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATA 26306
|||||| |||| |||| || ||| | ||| | | ||| ||||| || || |
Sbjct 89396 --GTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAAACATGATGACA 89453
Query 26307 ATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTT 26366
||| | |||| || || | ||||| | || || | |||||||| |||| |||
Sbjct 89454 TTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGTGAAATA--CTT 89511
Query 26367 C--ACTCAAAGCTGTATAAGTTTCAAGAACT 26395
| ||||| | |||||||||||| ||||
Sbjct 89512 CTGACTCATAAAGTTATAAGTTTCAATAACT 89542
>seq10
Length=648529
Score = 111 bits (122), Expect = 8e-20
Identities = 118/156 (76%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965
||| || |||| | || ||||| |||||||| | || |||||||||| || || ||
Sbjct 60332 CCAGTCCTCATTCTTTTCGACTTTTTCCATAAAAAGGTCGGGAATCCACAAAGCGTAGAA 60391
Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025
||||||||| ||||| || || || || |||||||||||| | | | || ||||||||
Sbjct 60392 TAAATCTCTGGCTCTGATCTCCTCCTTGCCGTGATTCTTTCTCAAGTTCAACAAATCAAA 60451
Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAA 26061
| ||| ||||||||| |||| ||| || |||||
Sbjct 60452 CACTTCTTCGTGCCATGGCTCTAGATAAATGGCAAA 60487
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039586754050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |