Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016495.1_202016-02-08]
134 sequences; 9,351,186 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq28 215 2e-50
seq9 102 2e-16
seq38 100 8e-16
seq1 98.7 3e-15
seq25 89.7 2e-12
>seq28
Length=271146
Score = 215 bits (238), Expect = 2e-50
Identities = 626/947 (66%), Gaps = 25/947 (3%)
Strand=Plus/Plus
Query 155582 AAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAAT 155641
|||| ||||||| |||| ||||| || |||||||| | | |||||| |||||
Sbjct 88744 AAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCGGGGAAGAGTATTCAACAAT 88803
Query 155642 CTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTT 155701
|||||||| |||||||| || ||| || || ||||||||||||| ||| ||||
Sbjct 88804 TTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTCTTCTGGTTAGTTTTTTTGTT 88863
Query 155702 ACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTT 155761
|||||||||||| || || ||| |||| || || || || | ||||| || || ||
Sbjct 88864 ACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTCTGTTTGTGCCTCAAGGATGGC 88923
Query 155762 TAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTG-CCTTCCGACTCATATTTCA 155820
||| || | |||| || || | |||| | | |||||| || ||| |
Sbjct 88924 GTACCAAAGCTTTTGGGCTTTGATG-GTTTGTCTTCCACGACCTTCCTTTTCGTATCTTT 88982
Query 155821 TATACAGCGTTCGGTAA--TCCTCACCGTAACAATCACTCAGTCCAGGG----CACTTAT 155874
|||| ||| || || || || || || || ||||| |||||
Sbjct 88983 CGTACAA--TTCCTCAAATTCATCTCCATAGACGTCGGCAAGGCCAGGAGCTTCACTT-- 89038
Query 155875 CGGGGCAAAACAGCGACCAAATTTTATTACCGAT-TACACGCTCCATAAATACATCACTC 155933
|| | ||||| | |||| ||| | | | ||| | | ||| || | ||||
Sbjct 89039 --GGAGAGAACAGGGTCCAATCGCCATT-CTGTTCTACTCTTTTCATGAACAGATCAGGG 89095
Query 155934 GCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGA-CTCCTCATCGCCGTGATTCTTCCG 155992
||| | ||| ||| | ||| || || | ||| |||||| | || || ||||| ||
Sbjct 89096 ATCCACAAAGCGGGGAATAAGTCTCTAGC-TCTGATCTCCTCTTTACCATGGTTCTTACG 89154
Query 155993 TAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACC 156052
| || | ||| | || || | ||| |||||||| |||| |||||| |||
Sbjct 89155 AATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTACAAAGCAAATGCACC 89214
Query 156053 ATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCAT 156109
| | ||| ||||| || || ||||| |||||||| || |||||||| | | |||
Sbjct 89215 AGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTGAAGACCCTCACCAT 89274
Query 156110 AGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAAC 156169
|||||||||||||| ||||| || || || || ||| | || || | | ||||
Sbjct 89275 TGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGATCCTGTGGCACGAAT 89334
Query 156170 ATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTAC 156229
||||||||| || | ||||| ||||| | ||| || ||| ||| |||||||| |
Sbjct 89335 ATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGCACATTCCTTCAA 89394
Query 156230 AGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAA 156289
||||| | |||| |||||||| || ||||| ||| | | || | || || |
Sbjct 89395 AGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAAACATGATGACAT 89454
Query 156290 TTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATT 156349
||| || | || || |||||||| || || ||||| | |||||| | |||||||| |
Sbjct 89455 TTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGTGAAATACTTCTG 89514
Query 156350 AGACATATAATCGTATGTCTCCTTAA-TCTTCTCAAGATTAGACCCGTGAATACAGATAG 156408
| |||| | | || || || ||| |||| ||| | | || ||||| | |||||
Sbjct 89515 ACTCATAAAGTTATAAGTTTCAATAACTCTT-GCAATGTCATCACCATGAATGCCGATAG 89573
Query 156409 AGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACT-CCATCAATTCGCAGAAGG 156467
|| | ||| || || |||||||| ||| ||| || | |||| ||||| |||||||
Sbjct 89574 CAACACGCATAATCAAGTGTTGAGGACGTTCTGCAA-CATTACCATTAATTCTCAGAAGG 89632
Query 156468 TATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATC 156514
|| | | ||||| || || || || || || | | || |||| ||
Sbjct 89633 TAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATACTGAAAGTC 89679
>seq9
Length=327418
Score = 102 bits (112), Expect = 2e-16
Identities = 380/579 (66%), Gaps = 30/579 (5%)
Strand=Plus/Plus
Query 251424 ACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGA 251483
||||||||| || | | ||||||||||||| || || | |||| ||| | ||
Sbjct 234180 ACACACATGTACTCGGAAAGCATCAGATGCTTCCATTAATCTTTCCTTCAAGAAACCAGC 234239
Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543
|||||||| | ||||||||| || | ||||| || |||||||||||||||||||| ||
Sbjct 234240 GGCACCGTGAGCAATCATACAGTCTCTTTCCATCTCTCCGAAACGAAGACCACCATCACG 234299
Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGT-GAGATTAACCATAGGACCGATGGAGCGGCTAT 251602
| ||||| || |||| || | || ||| | | ||| || ||| | | ||
Sbjct 234300 GGATCTACCTTCTACAGGTTGTCTGGTCAAGACT-TGTACAGGTCCTCTGGCTCTGGCAT 234358
Query 251603 GTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATGC 251662
| |||||||| |||||||| | || | |||||| ||| || || | ||| | |
Sbjct 234359 GAATCTTATCATCCACCATATGTCTCAGTCTCTGGTAATATGTTGGTCCAAAGAATA-CC 234417
Query 251663 TCGAAGGCAT---TTGCTCTCCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGATT 251719
| | | ||| || | ||||| | | || ||||| ||||| ||| ||||||
Sbjct 234418 TGG--GCCATTAATTTTTTACCAGTGTGTCCATTGTACATTACTTCAAATCCTCTAGATT 234475
Query 251720 CATAACCAAGTT---TCTGTAGCTCTGAAGCAATATCACCAATCTTGAATTTGCTAAAAC 251776
||| ||| | || | || | ||| | || ||| | || ||| || ||||
Sbjct 234476 GATACCCATTATCCCTCAGAAGGTTGGAAACCGCAT--CCACTGTTAAATCTG-TAAA-- 234530
Query 251777 TGGTG--CCGTCTCCGTAAAGAC--CCATTTGAATCAAC---ACTTTGCCTAAAAGTGTC 251829
||||| |||| || | | || | | | ||| |||| ||| || ||| |
Sbjct 234531 TGGTGTAGCGTCACCTTCATAACCTCTAATAGAACCAACCTTACTCAGC--AAA---CAC 234585
Query 251830 TCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCG 251889
|| | | || || | ||||||||| ||||||||||| || || || || | |||
Sbjct 234586 TCAATTAAGTGCGCAACCGTCATACGAGAAGGAATAGCATGTGGGTTAATAATCAAATCG 234645
Query 251890 GGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGT 251948
|| | || || ||| |||| |||||||| | | | | |||| | ||||| ||
Sbjct 234646 GGAACGATACCCTCTGCACTGAATGGCATATCTTCGTGC-CTATAAGTAACACCAATGGT 234704
Query 251949 TCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987
||||| || |||||||| || ||||||||||||||
Sbjct 234705 ACCCTTCTGACCGTGACGGGAGGCAAACTTATCACCAAT 234743
>seq38
Length=60795
Score = 100 bits (110), Expect = 8e-16
Identities = 309/470 (66%), Gaps = 21/470 (4%)
Strand=Plus/Plus
Query 288883 TCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTGCTTAAAT 288942
|| || | ||| ||||||||||| | ||||| ||||||| | || | | |||
Sbjct 3775 TCCAAAACATCAGCTCTGTTTGTACCAGCCAAGACAACAACATGGTCAGAACTATCAAAA 3834
Query 288943 CCATCCATACTTGT-TAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTC- 289000
|||||||| || | || | ||||| | ||| || ||||||| || |||||
Sbjct 3835 CCATCCAT-CTCGACTAGTAGCTGATTTAAAGTTGCCTCTTTTTCATCGTT---ACCTCC 3890
Query 289001 --TTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAAT 289058
| ||| ||| | | || | || | ||| | ||||||||||| |||| ||| ||
Sbjct 3891 CATGGAACCACTCTTA---CTACGTTCTCGACCGATCGCATCAATTTCATCAACGAATAT 3947
Query 289059 CACACACGGAGAATTTTGTCTCGCAATTGC--AAATAATTCTCTTACACGGGATGCTCCA 289116
| | | || | | | ||| || |||| |||||| || | || ||||| ||||||
Sbjct 3948 GATAGATGGCGCCATCTTTCTAGC--TTGCTGAAATAAATCACGAACTCGGGAAGCTCCA 4005
Query 289117 AGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCT 289176
| ||| ||| ||||||| ||||| |||||| | || || | |||| || |||
Sbjct 4006 ACACCCACAAACATTTCCACAAACTCAGAACCCGAAACAGACAAAAATGGAACTCCAGCT 4065
Query 289177 TCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGA 289236
||||| || |||| |||| || | ||||||||| || || || || | | | |||
Sbjct 4066 TCGCCAGCAGTTGCCTTCGCTAGCAATGTCTTACCAGTACCTGGAGGAC---CAGAAAGA 4122
Query 289237 A---CTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAAT 289293
| | || |||| | |||||| || || |||||||| ||| |||| | ||
Sbjct 4123 ATTGCACCTCTTGGAATTTTTGCTCCTAGTTTCTCATATTTCTTAGGATTCTTCAGGAAC 4182
Query 289294 TCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343
| || | |||| || ||| | ||| || ||||| || || || || ||
Sbjct 4183 TGAACGAATTCCATAATTTCTTCTTTAGCTTCATCGCAACCCGCCACGTC 4232
>seq1
Length=1282582
Score = 98.7 bits (108), Expect = 3e-15
Identities = 83/102 (81%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 302583 CTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAG 302642
||| | ||||||||||||||||||||| ||| || ||||| |||||||||||||| |
Sbjct 907782 CTTCACTAAACGACGCTGAATATAACCTGTTTCAGCAGTTTTCACAGCTGTATCAATCAA 907723
Query 302643 ACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGG 302684
||| |||||||| |||| || || ||||| | ||||| |||
Sbjct 907722 ACCTTCACGACCAGCCATGGCGTGAAAGAAGAACTCTTGCGG 907681
>seq25
Length=536034
Score = 89.7 bits (98), Expect = 2e-12
Identities = 288/436 (66%), Gaps = 22/436 (5%)
Strand=Plus/Minus
Query 133232 GCGTTTTTTGCTGCGAGTGATGGTATTGTTCTTGAAAATTTAG--GAACACGGTTTATGG 133289
|| || |||||||| ||| |||||||| |||||| || | ||| | || | |
Sbjct 216596 GCCTTCTTTGCTGCCTCTGACGGTATTGTCAATGAAAACTTGGTGGAAAAT--TTCAGTG 216539
Query 133290 GAGAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATA 133349
|| |||||||| ||||||| |||||| || | ||||| |||||| || |
Sbjct 216538 CTGAGGTTCAACTTCCCGAAGCAAAATGCTTTTACGGTTTCCAGATCATGATGGAGAACA 216479
Query 133350 TCCATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAG- 133408
| || || || || || || |||||||||||||||||||| |||| |||
Sbjct 216478 TTCACTCCGAGACTTACTCCTTGCTGATTGATACTTACATCAAAGA-----TCCAAAAGA 216424
Query 133409 --CACAA--ACTATTCAACGCCATTAGCGA-ATTTCCTTGTATTAAAAAGAAATCTGACT 133463
| || || ||||| |||| | | || |||| ||||| ||| | || ||||||
Sbjct 216423 GTCTGAATTCCTGTTCAATGCCA-TCGAGACCATTCCATGTATCAAAGAAAAGGCTGACT 216365
Query 133464 GGGCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTG 133523
|||| || | |||||| || | ||| || ||| ||| | ||||| || |
Sbjct 216364 GGGCCATGAGATGGATTTCTGATGACGATGCATTGTTCGCTGAACGTTTGGTTGCCTTCG 216305
Query 133524 CTGTAGTAGAGGGCA--tttttttCAGTGGTGCGTTCTGC-TCTATTTTTTGGCTTAAAA 133580
||| || ||||| | || ||||||| | | || ||| ||||| || ||| | || |
Sbjct 216304 CTGCTGTTGAGGGTATCTTCTTTTCAG-GAT--CTTTTGCTTCTATCTTCTGGTTGAAGA 216248
Query 133581 AGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCAC 133640
|| | ||| | | || || || || || || || ||||||| || ||||||| |
Sbjct 216247 AGAGAGGTCTCATGCCAGGTTTGACCTTCTCCAATGAGCTTATTTGCAGAGACGAGGGAT 216188
Query 133641 TTCACACCGAATTTGC 133656
| ||||| || |||||
Sbjct 216187 TACACACTGACTTTGC 216172
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471815073073158
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